| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226225187
Identifier: 226225187
GI number: 226225187
Start: 2681541
End: 2682872
Strand: Direct
Name: 226225187
Synonym: Lm4b_02609
Alternate gene names: NA
Gene position: 2681541-2682872 (Clockwise)
Preceding gene: 226225186
Following gene: 226225209
Centisome position: 92.06
GC content: 37.39
Gene sequence:
>1332_bases GTGATTCGATTTTTTAAAATAGTTACACCGATACTCCTATCTATCTCTTTAGTTGCTTGTAGTTCCGCAAGTGGAAAAAC AGAGAAAATTACTGCGCCAATTGAGAAAGACCGTAATTTATCGATGGTCGTAACGACGGATGTTCATTACTTTGCGCCAT CACTAACCGACAACGGAAAAGCCTTTGAAAAATATGTGGCTGCGGGTGATGGGAAACAGTTAGCTTATAGCGATGAAATA ACCGATGCTTTTTTGGCGGATGTAGAGGCTAAAAAAACAGACGTCCTTATTATTAGTGGCGACCTTACGAACAACGGTGA AAAAACAAGTCATGAAGAGTTAGCCAAAAAACTTACTCAAGTAGAGAAAACTGGGACGCAGGTTTTTGTTGTTCCGGGTA ATCATGACATTAACAACCCTTGGGCCCGCAAATTTGAAAAAGATAAGCAGTTACCAACCGACACTATATCACCAACTGAT TTCAGTAAAATTTATGGTGATTTTGGATATAAAGATGCTATTTCAAGTGATGAGTTTTCGCTGAGTTATTTAGCAGCTCC TTCTTCCAAAGTATGGCTGTTAATGTTAGATACCGCTATTTATAAAACAAATATGCAGCAAGGAAATCCCACAACGGAAG GCGGACTAACAGCCGGAACATTAGATTGGATAAAAGAAAGCAGTGCGCTTGCAAAGAAAAACGGCGCTAAACTTGTCCCT GTTTTGCATCATAATTTAACTGATCATAATGATGTTATTCAAAAAGGTTATACTATTAATTATAATCAACAAGTAATTGA TGCGCTTACGGAAGGCTCTATGGATTTTTCTCTAAGTGGCCATATTCATACGCAAAATATCCGCTCTGCGAAAAGCACAG ATGGCAAAGAAATTACCGATATCGTAACCAATGCTCTTTCTGTTTTCCCGCATAAATATGGCAATATTACTTATAGTGCC AAAAACAAAAACTTCACGTATCAATCTCAAAAGTTAGATATGGAAGCTTGGGCAAAAGCGCAAGGCTCTACGGATGAAAA CTTGCTTAATTTTAATCAATTTGATTACGAAACTTTTTATAATAGTGGCTACGATAAGGCAATGATGGATTTAATGACCG ATGAATCTTATGATAAGTACAACCAAGCGGATAAGGAAAAAATGGCAGATACGATGGGATTAAATAACATGTATTTCTTC GCCGGAACTGCCCCTCCAAAATCTGATGGTATGGCTTTATGGGATTCTGCACCGAATTCATTTTTGAAAGATTACGTTTT AAGTTCATCCAATCCGCCTAAGAAAAGTAATGACTATTATGTTAGTCCTTAA
Upstream 100 bases:
>100_bases GAGATATCTAAACCGTTTAGAACATTGCTCCTTCCATATTGAGTTTTGTTCTAAATTTTGGAACTTATTGTGAAAATACA AACATGAAAGCGTGATTAAC
Downstream 100 bases:
>100_bases ATCATAAAAAAACTGGTAGCCGTTATGGCTTACCAGTTTTTTTGTATTAACTAGATGCGGCTGCCGCACTCGCTGCTGCA GCTGCACTCACCGCAGCTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphohydrolase; Serine/Threonine Protein Phosphatase Family Protein; Ser/Thr Protein Phosphatase Family Protein; 3 5'-Cyclic-Nucleotide Phosphodiesterase; 5-Nucleotidase Domain-Containing Protein; Calcineurin-Like Phosphoesterase; Serine/Threonine Protein Phosphatase; 3 5-Cyclic-Nucleotide Phosphodiesterase; 5-Nucleotidase Domain Protein; Lipoprotein
Number of amino acids: Translated: 443; Mature: 443
Protein sequence:
>443_residues MIRFFKIVTPILLSISLVACSSASGKTEKITAPIEKDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEI TDAFLADVEAKKTDVLIISGDLTNNGEKTSHEELAKKLTQVEKTGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTD FSKIYGDFGYKDAISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLVP VLHHNLTDHNDVIQKGYTINYNQQVIDALTEGSMDFSLSGHIHTQNIRSAKSTDGKEITDIVTNALSVFPHKYGNITYSA KNKNFTYQSQKLDMEAWAKAQGSTDENLLNFNQFDYETFYNSGYDKAMMDLMTDESYDKYNQADKEKMADTMGLNNMYFF AGTAPPKSDGMALWDSAPNSFLKDYVLSSSNPPKKSNDYYVSP
Sequences:
>Translated_443_residues MIRFFKIVTPILLSISLVACSSASGKTEKITAPIEKDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEI TDAFLADVEAKKTDVLIISGDLTNNGEKTSHEELAKKLTQVEKTGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTD FSKIYGDFGYKDAISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLVP VLHHNLTDHNDVIQKGYTINYNQQVIDALTEGSMDFSLSGHIHTQNIRSAKSTDGKEITDIVTNALSVFPHKYGNITYSA KNKNFTYQSQKLDMEAWAKAQGSTDENLLNFNQFDYETFYNSGYDKAMMDLMTDESYDKYNQADKEKMADTMGLNNMYFF AGTAPPKSDGMALWDSAPNSFLKDYVLSSSNPPKKSNDYYVSP >Mature_443_residues MIRFFKIVTPILLSISLVACSSASGKTEKITAPIEKDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEI TDAFLADVEAKKTDVLIISGDLTNNGEKTSHEELAKKLTQVEKTGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTD FSKIYGDFGYKDAISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLVP VLHHNLTDHNDVIQKGYTINYNQQVIDALTEGSMDFSLSGHIHTQNIRSAKSTDGKEITDIVTNALSVFPHKYGNITYSA KNKNFTYQSQKLDMEAWAKAQGSTDENLLNFNQFDYETFYNSGYDKAMMDLMTDESYDKYNQADKEKMADTMGLNNMYFF AGTAPPKSDGMALWDSAPNSFLKDYVLSSSNPPKKSNDYYVSP
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49171; Mature: 49171
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRFFKIVTPILLSISLVACSSASGKTEKITAPIEKDRNLSMVVTTDVHYFAPSLTDNGK CCCHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCCCCCCEEEEEECHHEECCCCCCCCH AFEKYVAAGDGKQLAYSDEITDAFLADVEAKKTDVLIISGDLTNNGEKTSHEELAKKLTQ HHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHH VEKTGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYGDFGYKDAISSDEFS HHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCHHCCCCCCCE LSYLAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLVP EEEEECCCCCEEEEEEEHHHHHCCCCCCCCCCCCCCEECHHHHHHHHHHHHHCCCCEEEE VLHHNLTDHNDVIQKGYTINYNQQVIDALTEGSMDFSLSGHIHTQNIRSAKSTDGKEITD EHHCCCCCCHHHHHCCCEECCCHHHHHHHHCCCCCEEEECCEEECCCCCCCCCCCHHHHH IVTNALSVFPHKYGNITYSAKNKNFTYQSQKLDMEAWAKAQGSTDENLLNFNQFDYETFY HHHHHHHHCCHHCCCEEEEECCCCCEEHHHHCCHHHHHHCCCCCCCCCCCCCCCCHHHHH NSGYDKAMMDLMTDESYDKYNQADKEKMADTMGLNNMYFFAGTAPPKSDGMALWDSAPNS CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCHH FLKDYVLSSSNPPKKSNDYYVSP HHHHHHHCCCCCCCCCCCEEECC >Mature Secondary Structure MIRFFKIVTPILLSISLVACSSASGKTEKITAPIEKDRNLSMVVTTDVHYFAPSLTDNGK CCCHHHHHHHHHHHHHHHEECCCCCCCEEEECCCCCCCCCEEEEEECHHEECCCCCCCCH AFEKYVAAGDGKQLAYSDEITDAFLADVEAKKTDVLIISGDLTNNGEKTSHEELAKKLTQ HHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHH VEKTGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYGDFGYKDAISSDEFS HHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCHHCCCCCCCE LSYLAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLVP EEEEECCCCCEEEEEEEHHHHHCCCCCCCCCCCCCCEECHHHHHHHHHHHHHCCCCEEEE VLHHNLTDHNDVIQKGYTINYNQQVIDALTEGSMDFSLSGHIHTQNIRSAKSTDGKEITD EHHCCCCCCHHHHHCCCEECCCHHHHHHHHCCCCCEEEECCEEECCCCCCCCCCCHHHHH IVTNALSVFPHKYGNITYSAKNKNFTYQSQKLDMEAWAKAQGSTDENLLNFNQFDYETFY HHHHHHHHCCHHCCCEEEEECCCCCEEHHHHCCHHHHHHCCCCCCCCCCCCCCCCHHHHH NSGYDKAMMDLMTDESYDKYNQADKEKMADTMGLNNMYFFAGTAPPKSDGMALWDSAPNS CCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEECCCCHH FLKDYVLSSSNPPKKSNDYYVSP HHHHHHHCCCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA