Click here to switch to the map view.

The map label for this gene is 226225184

Identifier: 226225184

GI number: 226225184

Start: 2679440

End: 2679874

Strand: Direct

Name: 226225184

Synonym: Lm4b_02606

Alternate gene names: NA

Gene position: 2679440-2679874 (Clockwise)

Preceding gene: 226225183

Following gene: 226225185

Centisome position: 91.99

GC content: 38.85

Gene sequence:

>435_bases
GTGAAGAAGTATCTTTCTATGGTGAAGCGTTGGGATATTATTATTATTTTATCTCTTTGTATACTCTCCTTTTTGCCGAT
TGCTATTTTTTCATATGTAAAAGCGAATGAACCGGCTCCTGCTAACGGAAAAAAAGAGCTTGTTGCAGTTATTTCTGTTG
ATAGTAAAGAATATAAAACTGTTACGCTCACTGGGCACAAAGGGACGGAAAGCTTTGATGTGAAACAACCAGATGGACAT
ACTAACACGATTGAGGTTTCGGGGGAAGAAATCCGAATTAGTAAAGCGAACTGTAACGATCAAGTATGTGTTCGGACTGG
AGCAATTGATAAACAAGGCGATACAGTTGTTTGTCTTCCACATAAGTTAGTAATTGAAGTAAAAGCGAGTGACGGGAGTT
CAGGCGATTCAGATGATCCGATTATCTCTTCCTGA

Upstream 100 bases:

>100_bases
TTTTTATTATTTGTTGATTTCTTGAACTTTTTCCTATTATATTTAGGCATTATCCTTTAAAATAGGATTTGTACATGACA
TTTTGAAAGGAGGCAATACG

Downstream 100 bases:

>100_bases
CCTTATCCTCCAATAGATAGGAAAGTGTTTCTATGACAAAAAACAGACGATTAGTATATATTGCACTTCTGGCTGCTCAA
GCGGTTGTCATTAGTTTACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MKKYLSMVKRWDIIIILSLCILSFLPIAIFSYVKANEPAPANGKKELVAVISVDSKEYKTVTLTGHKGTESFDVKQPDGH
TNTIEVSGEEIRISKANCNDQVCVRTGAIDKQGDTVVCLPHKLVIEVKASDGSSGDSDDPIISS

Sequences:

>Translated_144_residues
MKKYLSMVKRWDIIIILSLCILSFLPIAIFSYVKANEPAPANGKKELVAVISVDSKEYKTVTLTGHKGTESFDVKQPDGH
TNTIEVSGEEIRISKANCNDQVCVRTGAIDKQGDTVVCLPHKLVIEVKASDGSSGDSDDPIISS
>Mature_144_residues
MKKYLSMVKRWDIIIILSLCILSFLPIAIFSYVKANEPAPANGKKELVAVISVDSKEYKTVTLTGHKGTESFDVKQPDGH
TNTIEVSGEEIRISKANCNDQVCVRTGAIDKQGDTVVCLPHKLVIEVKASDGSSGDSDDPIISS

Specific function: Unknown

COG id: COG5341

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15622; Mature: 15622

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKYLSMVKRWDIIIILSLCILSFLPIAIFSYVKANEPAPANGKKELVAVISVDSKEYKT
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCEEE
VTLTGHKGTESFDVKQPDGHTNTIEVSGEEIRISKANCNDQVCVRTGAIDKQGDTVVCLP
EEEECCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCEEEEEECCCCCCCCEEEEEC
HKLVIEVKASDGSSGDSDDPIISS
CEEEEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKYLSMVKRWDIIIILSLCILSFLPIAIFSYVKANEPAPANGKKELVAVISVDSKEYKT
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECCCCEEE
VTLTGHKGTESFDVKQPDGHTNTIEVSGEEIRISKANCNDQVCVRTGAIDKQGDTVVCLP
EEEECCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCEEEEEECCCCCCCCEEEEEC
HKLVIEVKASDGSSGDSDDPIISS
CEEEEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA