Definition Listeria monocytogenes Clip81459, complete genome.
Accession NC_012488
Length 2,912,690

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The map label for this gene is 226225141

Identifier: 226225141

GI number: 226225141

Start: 2649745

End: 2650614

Strand: Direct

Name: 226225141

Synonym: Lm4b_02562

Alternate gene names: NA

Gene position: 2649745-2650614 (Clockwise)

Preceding gene: 226225137

Following gene: 226225148

Centisome position: 90.97

GC content: 33.79

Gene sequence:

>870_bases
ATGAAAAAAAGAGGTTTATTGTTGGTAAGTATTTTAATGTTTTTCAGTTTTTTGACAGTAGCATGTGGGAGTTCTGAAGA
CAATGAAGAAAGTGGGGAGAAAGAAAAGAAAGAAATTGAATTAACTATTGACCAAACTACTGTAACGACTGATGAAAATG
GGAAAGCGCTTATAGAAGGAACAGTGGATCCTAAAGCCAAATTATCCATTGATGGCGCAACAGTTAAACAAGATAGTGAT
GGAAGATTTACTTTTACCAAAATTATAAACAGCGATTCCGAAGCAAGAGTCTATGCAAAACTTATAGCAGTTAGGAAAAA
CTATGAAGACGAGGAATATAGTGTAATTATTAATAACAATTCAAAAGCATATAACGACAACATGGCAAAACAAGAGACAA
TACAAAAAGAAGAAGCCGCGAAAGCTGAAAAGGAACGTAAAGAAGCGGAGGAAAAAGCAAAACAAGAAGAAGAAGCAGCC
GCTGCAAAAGCTGCAACGACTGATGAAAACACGCCTTCCGATGATACTGTATATGGCACTTTAGCCAGCAAAGATACTTT
AACAAAAGAGGGAGATGCATTTTATAAAGATGAAGAACTTGATGTACTCTATTCTACAGTAGAAAACGATGAAATTTTTC
AAGTGCTTATACAATTAGGCGATGAAAGTACAATTCGAAAAGATTTAGATAAAAATCATTTAACAGAATTAGCAAGAGGT
TATATGGAATCCGATGCCACTCTTATACAAACTGTTTCTGATGAATCCTTTGTTTATGAATCTCCATCTATAAATAAAAC
ATATACAGTAGATTATATGTTAAACGATGAAGGTTATGTTATTGCGGTTTATGTTACACAAGCAATGTGA

Upstream 100 bases:

>100_bases
CAAATGATCATATATGGCACATTTTAAAAAAAGCAAGGTTATTCATGTTATAATAGCTGTTCTGTATATTTATATCTAAT
CACAAAAGGAGCCGGAGAAG

Downstream 100 bases:

>100_bases
CTAGAAAAAAACCTTTAAGTTATACAACTTTTAATTAAAAATATACTATTACAAAAAAGTCCTTAAGGGCTTTTTTGTTT
TTTATTTAACTCAACTAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MKKRGLLLVSILMFFSFLTVACGSSEDNEESGEKEKKEIELTIDQTTVTTDENGKALIEGTVDPKAKLSIDGATVKQDSD
GRFTFTKIINSDSEARVYAKLIAVRKNYEDEEYSVIINNNSKAYNDNMAKQETIQKEEAAKAEKERKEAEEKAKQEEEAA
AAKAATTDENTPSDDTVYGTLASKDTLTKEGDAFYKDEELDVLYSTVENDEIFQVLIQLGDESTIRKDLDKNHLTELARG
YMESDATLIQTVSDESFVYESPSINKTYTVDYMLNDEGYVIAVYVTQAM

Sequences:

>Translated_289_residues
MKKRGLLLVSILMFFSFLTVACGSSEDNEESGEKEKKEIELTIDQTTVTTDENGKALIEGTVDPKAKLSIDGATVKQDSD
GRFTFTKIINSDSEARVYAKLIAVRKNYEDEEYSVIINNNSKAYNDNMAKQETIQKEEAAKAEKERKEAEEKAKQEEEAA
AAKAATTDENTPSDDTVYGTLASKDTLTKEGDAFYKDEELDVLYSTVENDEIFQVLIQLGDESTIRKDLDKNHLTELARG
YMESDATLIQTVSDESFVYESPSINKTYTVDYMLNDEGYVIAVYVTQAM
>Mature_289_residues
MKKRGLLLVSILMFFSFLTVACGSSEDNEESGEKEKKEIELTIDQTTVTTDENGKALIEGTVDPKAKLSIDGATVKQDSD
GRFTFTKIINSDSEARVYAKLIAVRKNYEDEEYSVIINNNSKAYNDNMAKQETIQKEEAAKAEKERKEAEEKAKQEEEAA
AAKAATTDENTPSDDTVYGTLASKDTLTKEGDAFYKDEELDVLYSTVENDEIFQVLIQLGDESTIRKDLDKNHLTELARG
YMESDATLIQTVSDESFVYESPSINKTYTVDYMLNDEGYVIAVYVTQAM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32340; Mature: 32340

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRGLLLVSILMFFSFLTVACGSSEDNEESGEKEKKEIELTIDQTTVTTDENGKALIEG
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECEEEEECCCCCEEEEE
TVDPKAKLSIDGATVKQDSDGRFTFTKIINSDSEARVYAKLIAVRKNYEDEEYSVIINNN
CCCCCEEEEECCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEECCC
SKAYNDNMAKQETIQKEEAAKAEKERKEAEEKAKQEEEAAAAKAATTDENTPSDDTVYGT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
LASKDTLTKEGDAFYKDEELDVLYSTVENDEIFQVLIQLGDESTIRKDLDKNHLTELARG
ECCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHH
YMESDATLIQTVSDESFVYESPSINKTYTVDYMLNDEGYVIAVYVTQAM
HHCCCCCEEEEECCCCEEEECCCCCCEEEEEEEECCCCEEEEEEEEECC
>Mature Secondary Structure
MKKRGLLLVSILMFFSFLTVACGSSEDNEESGEKEKKEIELTIDQTTVTTDENGKALIEG
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECEEEEECCCCCEEEEE
TVDPKAKLSIDGATVKQDSDGRFTFTKIINSDSEARVYAKLIAVRKNYEDEEYSVIINNN
CCCCCEEEEECCCEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEECCC
SKAYNDNMAKQETIQKEEAAKAEKERKEAEEKAKQEEEAAAAKAATTDENTPSDDTVYGT
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEE
LASKDTLTKEGDAFYKDEELDVLYSTVENDEIFQVLIQLGDESTIRKDLDKNHLTELARG
ECCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHH
YMESDATLIQTVSDESFVYESPSINKTYTVDYMLNDEGYVIAVYVTQAM
HHCCCCCEEEEECCCCEEEECCCCCCEEEEEEEECCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA