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The map label for this gene is 226225066

Identifier: 226225066

GI number: 226225066

Start: 2569008

End: 2570066

Strand: Direct

Name: 226225066

Synonym: Lm4b_02487

Alternate gene names: NA

Gene position: 2569008-2570066 (Clockwise)

Preceding gene: 226225065

Following gene: 226225105

Centisome position: 88.2

GC content: 36.36

Gene sequence:

>1059_bases
ATGAGTAAAGGCACTGATGATAGCCGAAGAAGCAGCAAGAAATACAAACGTAGAAGAAAAATTTTATTCTGGATTCTAAT
TCCTGTAATGTGCTTAGTACTTGCAGGTGTCGGATACGGCACTTATCTTTTTAGTAAAACAAAACTCGCAGCAGATAACT
CTTATGATAATGTAAGGAACGGAAAAGCCTCTACACTTCGAACAAATGACATTGAACCTATAAAAGATAGTTTTTCTATT
TTAATTATTGGTGTTGATACCAGCTCTACACGGGCCGAAAATGGTAACCCTCGAAGCGATTCACTAATCTTAGCAACATT
TAATGTCAAAGATTCACGCATAGAGATGACTAGTATTCCGCGTGATTCTTATGTTCATATTGAAGATTCCGCCAAAGACA
TTGATAAATACACGAAAATTAACGCAGCTCATGCTTACGGTGGTCCAGAACTTACAATGAAAACCGTAGAAGAAGAATTT
AAGATTCCAATTGATTATTATGTTCGTTTTGACTTTGATGCATTCTTAAAAATTGTGGATGCTTTAGACGGAATTGATGT
AGATGTTCCAGTGGACTTCACTGAGCAAGATTCTAAAGACAACGCCGGTGCAATCACTCTAAAAAAAGGTCCTCAACACC
TTAACGCTGAGCAAGCTTTAGCACTAGCTCGTACACGACACATCGATAGTGATATCGAACGTGGCAAACGTCAACAACTA
ATCATTAAATCTATTGTAAGCGAAGCAACATCCATTTCTTCTGTAAGCAAATATTCCGATATCATTGAAGTTGTTGGAGA
TAACATGAAAACCAACTTAACTTTCAATCAAATGCTTTCTATCGCAAAATATGGAATGACAAATAAAATTGATATTAAAT
CCCTTAACTTAAAAGGGGATAGCAACCCAATGGACGGTATTTATTACTACAAACTTGATGAAAGCTCTGTGCAAAGTATT
TCGAATGAATTTGCTGATGAACTTGGAATTAAACAACCATTCCCTGGTGCAGCACCGTATTCAGACGAAAGTTCTAACAC
AACTAGCACTTCTAATTAA

Upstream 100 bases:

>100_bases
AGTTTAAAAATTAAAGAAACCGTAAATCGGGCGTAACATTCTTTAATGCAACAAATGATACAATAAAACTTAGAAAAGTG
ACTATAAGGAGAATTAATAT

Downstream 100 bases:

>100_bases
AAAAAGACCAACAACTAATAAATAGTTGTTGGTCTTTTTATTTTCGTTTTCGATGTATTTTTTGAAGTAAATTTAAGATT
GGTCGGTAATCCTCACCAAT

Product: transcriptional regulator LytR

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MSKGTDDSRRSSKKYKRRRKILFWILIPVMCLVLAGVGYGTYLFSKTKLAADNSYDNVRNGKASTLRTNDIEPIKDSFSI
LIIGVDTSSTRAENGNPRSDSLILATFNVKDSRIEMTSIPRDSYVHIEDSAKDIDKYTKINAAHAYGGPELTMKTVEEEF
KIPIDYYVRFDFDAFLKIVDALDGIDVDVPVDFTEQDSKDNAGAITLKKGPQHLNAEQALALARTRHIDSDIERGKRQQL
IIKSIVSEATSISSVSKYSDIIEVVGDNMKTNLTFNQMLSIAKYGMTNKIDIKSLNLKGDSNPMDGIYYYKLDESSVQSI
SNEFADELGIKQPFPGAAPYSDESSNTTSTSN

Sequences:

>Translated_352_residues
MSKGTDDSRRSSKKYKRRRKILFWILIPVMCLVLAGVGYGTYLFSKTKLAADNSYDNVRNGKASTLRTNDIEPIKDSFSI
LIIGVDTSSTRAENGNPRSDSLILATFNVKDSRIEMTSIPRDSYVHIEDSAKDIDKYTKINAAHAYGGPELTMKTVEEEF
KIPIDYYVRFDFDAFLKIVDALDGIDVDVPVDFTEQDSKDNAGAITLKKGPQHLNAEQALALARTRHIDSDIERGKRQQL
IIKSIVSEATSISSVSKYSDIIEVVGDNMKTNLTFNQMLSIAKYGMTNKIDIKSLNLKGDSNPMDGIYYYKLDESSVQSI
SNEFADELGIKQPFPGAAPYSDESSNTTSTSN
>Mature_351_residues
SKGTDDSRRSSKKYKRRRKILFWILIPVMCLVLAGVGYGTYLFSKTKLAADNSYDNVRNGKASTLRTNDIEPIKDSFSIL
IIGVDTSSTRAENGNPRSDSLILATFNVKDSRIEMTSIPRDSYVHIEDSAKDIDKYTKINAAHAYGGPELTMKTVEEEFK
IPIDYYVRFDFDAFLKIVDALDGIDVDVPVDFTEQDSKDNAGAITLKKGPQHLNAEQALALARTRHIDSDIERGKRQQLI
IKSIVSEATSISSVSKYSDIIEVVGDNMKTNLTFNQMLSIAKYGMTNKIDIKSLNLKGDSNPMDGIYYYKLDESSVQSIS
NEFADELGIKQPFPGAAPYSDESSNTTSTSN

Specific function: Unknown

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 39173; Mature: 39042

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKGTDDSRRSSKKYKRRRKILFWILIPVMCLVLAGVGYGTYLFSKTKLAADNSYDNVRN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEECCEECCCCCCCCCCC
GKASTLRTNDIEPIKDSFSILIIGVDTSSTRAENGNPRSDSLILATFNVKDSRIEMTSIP
CCCCEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECC
RDSYVHIEDSAKDIDKYTKINAAHAYGGPELTMKTVEEEFKIPIDYYVRFDFDAFLKIVD
CCCEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECHHHHHHHHH
ALDGIDVDVPVDFTEQDSKDNAGAITLKKGPQHLNAEQALALARTRHIDSDIERGKRQQL
HHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHCHHHHH
IIKSIVSEATSISSVSKYSDIIEVVGDNMKTNLTFNQMLSIAKYGMTNKIDIKSLNLKGD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCC
SNPMDGIYYYKLDESSVQSISNEFADELGIKQPFPGAAPYSDESSNTTSTSN
CCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SKGTDDSRRSSKKYKRRRKILFWILIPVMCLVLAGVGYGTYLFSKTKLAADNSYDNVRN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEECCEECCCCCCCCCCC
GKASTLRTNDIEPIKDSFSILIIGVDTSSTRAENGNPRSDSLILATFNVKDSRIEMTSIP
CCCCEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEECC
RDSYVHIEDSAKDIDKYTKINAAHAYGGPELTMKTVEEEFKIPIDYYVRFDFDAFLKIVD
CCCEEEECCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCEEEEEEECHHHHHHHHH
ALDGIDVDVPVDFTEQDSKDNAGAITLKKGPQHLNAEQALALARTRHIDSDIERGKRQQL
HHCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHCHHHHH
IIKSIVSEATSISSVSKYSDIIEVVGDNMKTNLTFNQMLSIAKYGMTNKIDIKSLNLKGD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCEEEEEEECCCC
SNPMDGIYYYKLDESSVQSISNEFADELGIKQPFPGAAPYSDESSNTTSTSN
CCCCCCEEEEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7816834 [H]