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The map label for this gene is 226224995

Identifier: 226224995

GI number: 226224995

Start: 2491502

End: 2492410

Strand: Direct

Name: 226224995

Synonym: Lm4b_02416

Alternate gene names: NA

Gene position: 2491502-2492410 (Clockwise)

Preceding gene: 226224986

Following gene: 226225014

Centisome position: 85.54

GC content: 30.91

Gene sequence:

>909_bases
ATGCAAAATATTGGAGACACATTAAAATTTATTCGGAAAAGTAAAAACTTAACACAACAAGAGACTTGTACGAATGCCCT
CAGTCGTTCTAACTATCAAAAAATCGAAAATAATAAAATCATGCCTAGTATGGATCGTTTTATCCAAATCTTACTTAATT
TCAATATGACGTTAGAAGAATTTGAATTTGTAAAACGGGACTTTACACCTTCTCCAAAAGAAAATATCCTTTATCTATAC
TCCAAGATTATTACCTCCTCCGAAACAGATATGATACTTAATGTTATTTCCAAATGCGATGATTACTTAGAAAACCACAC
TGATATTTTTATTTCTGATATTAAAGCCTCACTTGAAGGTATTTTACTAGCTGAAAAAGAACATAATTTTGAACTTGCTC
GAGAAAAAGTAACCTACATTTGGGACAGACTTTCGGAAGCGGATGAATTATTTTGGAATGACATATTAATTTTAAGAAAT
ATTTTCTTTATTTTTGAAAATGAAACCGCTCAACATATTGTAAATCGCCTTATCTCTCAACTTAAAAAATATCGTTACCT
ATATCCAACCCTTTCGATTGAGATTTCACTTCATGTTAATCGTGCTACTTATTTAATTTTAGACGAAGAATATGAACTAG
CTTTGCACTACATTGAATTATCTATAAAAATCGCTAAGCATAACCATTACTACTTACAATTCTGTATGGCTATTGCGAAA
AAAGGAATTGTGCTGTATAAGCTCGGCCAAAAGCAAAAAGGTAAACACTTTATGCAACGAGCACTTAGAGTGGCTAAAGT
GCTTGAAGAAGAGCGTATTCTAAATGGTATCAAAAATGAAATAGATTATTTTCTTCACGATGAACTTCAAAATCTCTCTT
TAAACGAATTCACCAAAATCGACATATAA

Upstream 100 bases:

>100_bases
CATGTCTTCTCCCTCCTTTTTCATCTATACAGAAATACTAACTCACAAATCTTACATAAAATTAAAAAGCATCAAATTTG
AACAAATGGAGCTGAGTTTT

Downstream 100 bases:

>100_bases
AAAAAGCCTAAATCTAGCTTCTCCAACTTTTGGTTGAATGACTAGATTTAGGCTTTTATTGTTGGCGCTCTTTAAAAGCG
CGTTCGATATCACGTTTTGC

Product: transcription regulator

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MQNIGDTLKFIRKSKNLTQQETCTNALSRSNYQKIENNKIMPSMDRFIQILLNFNMTLEEFEFVKRDFTPSPKENILYLY
SKIITSSETDMILNVISKCDDYLENHTDIFISDIKASLEGILLAEKEHNFELAREKVTYIWDRLSEADELFWNDILILRN
IFFIFENETAQHIVNRLISQLKKYRYLYPTLSIEISLHVNRATYLILDEEYELALHYIELSIKIAKHNHYYLQFCMAIAK
KGIVLYKLGQKQKGKHFMQRALRVAKVLEEERILNGIKNEIDYFLHDELQNLSLNEFTKIDI

Sequences:

>Translated_302_residues
MQNIGDTLKFIRKSKNLTQQETCTNALSRSNYQKIENNKIMPSMDRFIQILLNFNMTLEEFEFVKRDFTPSPKENILYLY
SKIITSSETDMILNVISKCDDYLENHTDIFISDIKASLEGILLAEKEHNFELAREKVTYIWDRLSEADELFWNDILILRN
IFFIFENETAQHIVNRLISQLKKYRYLYPTLSIEISLHVNRATYLILDEEYELALHYIELSIKIAKHNHYYLQFCMAIAK
KGIVLYKLGQKQKGKHFMQRALRVAKVLEEERILNGIKNEIDYFLHDELQNLSLNEFTKIDI
>Mature_302_residues
MQNIGDTLKFIRKSKNLTQQETCTNALSRSNYQKIENNKIMPSMDRFIQILLNFNMTLEEFEFVKRDFTPSPKENILYLY
SKIITSSETDMILNVISKCDDYLENHTDIFISDIKASLEGILLAEKEHNFELAREKVTYIWDRLSEADELFWNDILILRN
IFFIFENETAQHIVNRLISQLKKYRYLYPTLSIEISLHVNRATYLILDEEYELALHYIELSIKIAKHNHYYLQFCMAIAK
KGIVLYKLGQKQKGKHFMQRALRVAKVLEEERILNGIKNEIDYFLHDELQNLSLNEFTKIDI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35884; Mature: 35884

Theoretical pI: Translated: 6.43; Mature: 6.43

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNIGDTLKFIRKSKNLTQQETCTNALSRSNYQKIENNKIMPSMDRFIQILLNFNMTLEE
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHCCCCHHH
FEFVKRDFTPSPKENILYLYSKIITSSETDMILNVISKCDDYLENHTDIFISDIKASLEG
HHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHH
ILLAEKEHNFELAREKVTYIWDRLSEADELFWNDILILRNIFFIFENETAQHIVNRLISQ
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LKKYRYLYPTLSIEISLHVNRATYLILDEEYELALHYIELSIKIAKHNHYYLQFCMAIAK
HHHHHEECCEEEEEEEEEECCEEEEEEECCHHHHEEEEEEEEEEECCCHHHHHHHHHHHH
KGIVLYKLGQKQKGKHFMQRALRVAKVLEEERILNGIKNEIDYFLHDELQNLSLNEFTKI
CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEC
DI
CC
>Mature Secondary Structure
MQNIGDTLKFIRKSKNLTQQETCTNALSRSNYQKIENNKIMPSMDRFIQILLNFNMTLEE
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHCCCCHHH
FEFVKRDFTPSPKENILYLYSKIITSSETDMILNVISKCDDYLENHTDIFISDIKASLEG
HHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHH
ILLAEKEHNFELAREKVTYIWDRLSEADELFWNDILILRNIFFIFENETAQHIVNRLISQ
EEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
LKKYRYLYPTLSIEISLHVNRATYLILDEEYELALHYIELSIKIAKHNHYYLQFCMAIAK
HHHHHEECCEEEEEEEEEECCEEEEEEECCHHHHEEEEEEEEEEECCCHHHHHHHHHHHH
KGIVLYKLGQKQKGKHFMQRALRVAKVLEEERILNGIKNEIDYFLHDELQNLSLNEFTKI
CCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEC
DI
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA