| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
Click here to switch to the map view.
The map label for this gene is inlJ [H]
Identifier: 226224947
GI number: 226224947
Start: 2442456
End: 2445047
Strand: Direct
Name: inlJ [H]
Synonym: Lm4b_02368
Alternate gene names: 226224947
Gene position: 2442456-2445047 (Clockwise)
Preceding gene: 226224944
Following gene: 226224948
Centisome position: 83.86
GC content: 37.65
Gene sequence:
>2592_bases ATGCAAAAAGCAATCAAAATAATGTTAGTTTTATTTTTAATGACAACCGTATTTTTACCTTTTAGTAATGTTCGGGCAGC ATCAACTGATGTAGTAAATATACCAGATCCGTATTTAAACGAAGGTCTTAAGAGCATCGTAGGAAATCCATTCTTAACCG AATTGACTGAAGCGAATCTTGAAACCATTAGTGTCGCTGATATCTCTTATATGAATGGAGTACCTGGTTATGCTGTCACT GGTTTAATTAGTGATTTAACCGGACTCGAAAAAGCAGTTAATATGACCAAATTATATTTTTCAAACCAAACAGAAATTAA AAATTTAAATCAAATAAAAGATTTACCTAATCTGAAGAAAATTGTTGGTGTTACTACAGGTTTAAATGATATTAAAGCCC TTGGTGAAATGCCCGCACTCGAAGAACTAGAATTAGGTGGGGATTATATTACTGATTTCACTCCCTTACTTGAAAAAGAT AATTTAAAATCATTTTCTTATAACTCGTATGCTTGGTTAAATCCAGCATATCACCAAATTGATAATGAAGAATTTAAAAA ATTTACAAACCTTAAATCACTCGAAAGTTTAGATGTAACTTGGAATAACATTACCGACTTATCATCATTAACTGCAAATG ATCATATTACAAACTTAAATCTAAGTTACAATAAGTTCACTAATATAGCTCCAATTGCTACAATGAAAGAACTTAAAGTC CTTTATTTAAACAATAACAACCTAACTTCCATTGATTCTTTAAATACACTAAGAGGATTAACTATAGCCTATGCTGATAA TAATAACATTACTGATTTGAGTAATTTAAAAGACTTTTTTGAAGGCATGGATGTCGTTGGAGATTATAAAGGTTTACAAG TTAACAACCAAACTATCACACTTCCAACTATTAATATCAAAGAAGGTGGAACAGCTATTTCAAATAACCCTACTTTAGAT ATTGATGGCGAAAAAATGCCTGTTTCTAGCATTTCTGATGGCGGAACAGTATCTACCGATAATAAAACCGTTTCTTTTAC TAACTTACCAGTTGGAAATAAGACTGTTACTTATAAAGCAACATTCACAGCTACCTCCACTAAAGGAGTACCACTTAGTT ATTCTATTAAAGTATCGCAACCAATTAATGTATCTGCACAATCCGATTCAACAGTAAACGTATTTTACAAAGATGAAAAT GGCGATGAATTAGCTCCAAGTGAAACAATTTCTGGTAAATCCGGAGAAAATTATCAAACAATAGAAAAAACAATTACTAA CTACACATTAAAAGAAATTGAAGGCCAGCCTTCAGGACAATTTGGCGATAGTGATGCAACAGTCACTTACGTTTACGAAA AAGCAGACGGCGCTCCTGTTACCGTGAAATATGTCGACGTGGATGGCAACGAATTAGCTACTTCCGACACACTGAACGGC AAAATTGATGCTCCTTATCAATCTACAGCCAAAAGCATCACTGGTTGGACGGTCAAAACGACTCCTGCCAATGCAACGGG CGTATTCACAAACGCTAACCAAACGGTCACTTATGTGTATGAAAAAGCGGATGGCGCTCCTGTTACCGTGAAATATGTCG ACGCGGATGGCAACGAATTAGCTACTTCCGACACACTGAACGGCAAAATTGATGCTCCTTATCAAACTACCGCTAAAAGT CTTTCTGGTTGGGCAGTCAAAACGACTCCAACCAACGCAACGGGCGTATTCACAAACGCTAACCAAACGGTCACTTATGT GTACGAAAAAGCGGACGGCGCTCCTGTTACCGTGAAATATGTCGACGTGGATGGCAACGAATTAGCTACTTCCGACACAC TGAACGGCAAAATTGATGCTCCTTATCAATCTACAGCCAAAAGCATCACTGGTTGGACGGTCAAAACGACTCCTGCCAAT GCAACGGGCGTATTCACAAACGCTAACCAAACGGTCACTTATGTGTACGAAAAAGCGGACGGCGCTCCTGTTACCGTGAA ATATGTCGACGCGGATGGCAACGAATTAGCTACTTCCGACACACTGAACGGCAAAATTGATGCTCCTTATCAATCTACAG CCAAAAGCATCACTGGTTGGGCAGTCAAAACGACTCCTGCCAATGCAACGGGCGTATTCACAAACGCTAACCAAACGGTC ACTTATGTGTACGAAAAAGCGGACGGCGCTCCTGTTACCGTGAAATATGTCGACGTGGATGGCAACGAATTAGCTACTCC AGATACATTGAACGGTAAGCTAGATACATCTTACGCGGCAACAGCTAAAAACTTGAGTGGTTGGAAGCTAACAGCCACAC CAGCCAACGCTAATGGCGTATTTACAACTGATGCTCAAACAGTCACCTTTGTATATGCTAAACAAGAAGACAATCCTAAA AAAGAGGATAAAAACAAAACACCTATTAAAATCAGCGAAAACAAACCAACAGCAAGCAAAGTAACTAGAATCAAAAAACA AACAAAATTACCGAAAACTGGTGATAATCAACAAGATAGTATATTGTTTGGATTAATTGGTACATGTTTCGTTCTCTTAG GAATTTACTCTATCTCTAAGAAAAACAGCTAA
Upstream 100 bases:
>100_bases AAATACTACTTTAATCAATTAATTTTGTTGTTGAAATAGTTAATTTTAACGAATAAATAATTACGAATACATTTCAAAAA ACAAGGAGGAAATTAAACAT
Downstream 100 bases:
>100_bases AATAAATAGCTAAAACTCTCTTATCAATTGGATAAGAGAGTTTTTGTTTGGTAATTACTTCATATTGCACTACTTCCAAC CTCAGGAAACCCAATTTAAT
Product: Cell wall surface anchor family protein (LPXTG motif)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 863; Mature: 863
Protein sequence:
>863_residues MQKAIKIMLVLFLMTTVFLPFSNVRAASTDVVNIPDPYLNEGLKSIVGNPFLTELTEANLETISVADISYMNGVPGYAVT GLISDLTGLEKAVNMTKLYFSNQTEIKNLNQIKDLPNLKKIVGVTTGLNDIKALGEMPALEELELGGDYITDFTPLLEKD NLKSFSYNSYAWLNPAYHQIDNEEFKKFTNLKSLESLDVTWNNITDLSSLTANDHITNLNLSYNKFTNIAPIATMKELKV LYLNNNNLTSIDSLNTLRGLTIAYADNNNITDLSNLKDFFEGMDVVGDYKGLQVNNQTITLPTINIKEGGTAISNNPTLD IDGEKMPVSSISDGGTVSTDNKTVSFTNLPVGNKTVTYKATFTATSTKGVPLSYSIKVSQPINVSAQSDSTVNVFYKDEN GDELAPSETISGKSGENYQTIEKTITNYTLKEIEGQPSGQFGDSDATVTYVYEKADGAPVTVKYVDVDGNELATSDTLNG KIDAPYQSTAKSITGWTVKTTPANATGVFTNANQTVTYVYEKADGAPVTVKYVDADGNELATSDTLNGKIDAPYQTTAKS LSGWAVKTTPTNATGVFTNANQTVTYVYEKADGAPVTVKYVDVDGNELATSDTLNGKIDAPYQSTAKSITGWTVKTTPAN ATGVFTNANQTVTYVYEKADGAPVTVKYVDADGNELATSDTLNGKIDAPYQSTAKSITGWAVKTTPANATGVFTNANQTV TYVYEKADGAPVTVKYVDVDGNELATPDTLNGKLDTSYAATAKNLSGWKLTATPANANGVFTTDAQTVTFVYAKQEDNPK KEDKNKTPIKISENKPTASKVTRIKKQTKLPKTGDNQQDSILFGLIGTCFVLLGIYSISKKNS
Sequences:
>Translated_863_residues MQKAIKIMLVLFLMTTVFLPFSNVRAASTDVVNIPDPYLNEGLKSIVGNPFLTELTEANLETISVADISYMNGVPGYAVT GLISDLTGLEKAVNMTKLYFSNQTEIKNLNQIKDLPNLKKIVGVTTGLNDIKALGEMPALEELELGGDYITDFTPLLEKD NLKSFSYNSYAWLNPAYHQIDNEEFKKFTNLKSLESLDVTWNNITDLSSLTANDHITNLNLSYNKFTNIAPIATMKELKV LYLNNNNLTSIDSLNTLRGLTIAYADNNNITDLSNLKDFFEGMDVVGDYKGLQVNNQTITLPTINIKEGGTAISNNPTLD IDGEKMPVSSISDGGTVSTDNKTVSFTNLPVGNKTVTYKATFTATSTKGVPLSYSIKVSQPINVSAQSDSTVNVFYKDEN GDELAPSETISGKSGENYQTIEKTITNYTLKEIEGQPSGQFGDSDATVTYVYEKADGAPVTVKYVDVDGNELATSDTLNG KIDAPYQSTAKSITGWTVKTTPANATGVFTNANQTVTYVYEKADGAPVTVKYVDADGNELATSDTLNGKIDAPYQTTAKS LSGWAVKTTPTNATGVFTNANQTVTYVYEKADGAPVTVKYVDVDGNELATSDTLNGKIDAPYQSTAKSITGWTVKTTPAN ATGVFTNANQTVTYVYEKADGAPVTVKYVDADGNELATSDTLNGKIDAPYQSTAKSITGWAVKTTPANATGVFTNANQTV TYVYEKADGAPVTVKYVDVDGNELATPDTLNGKLDTSYAATAKNLSGWKLTATPANANGVFTTDAQTVTFVYAKQEDNPK KEDKNKTPIKISENKPTASKVTRIKKQTKLPKTGDNQQDSILFGLIGTCFVLLGIYSISKKNS >Mature_863_residues MQKAIKIMLVLFLMTTVFLPFSNVRAASTDVVNIPDPYLNEGLKSIVGNPFLTELTEANLETISVADISYMNGVPGYAVT GLISDLTGLEKAVNMTKLYFSNQTEIKNLNQIKDLPNLKKIVGVTTGLNDIKALGEMPALEELELGGDYITDFTPLLEKD NLKSFSYNSYAWLNPAYHQIDNEEFKKFTNLKSLESLDVTWNNITDLSSLTANDHITNLNLSYNKFTNIAPIATMKELKV LYLNNNNLTSIDSLNTLRGLTIAYADNNNITDLSNLKDFFEGMDVVGDYKGLQVNNQTITLPTINIKEGGTAISNNPTLD IDGEKMPVSSISDGGTVSTDNKTVSFTNLPVGNKTVTYKATFTATSTKGVPLSYSIKVSQPINVSAQSDSTVNVFYKDEN GDELAPSETISGKSGENYQTIEKTITNYTLKEIEGQPSGQFGDSDATVTYVYEKADGAPVTVKYVDVDGNELATSDTLNG KIDAPYQSTAKSITGWTVKTTPANATGVFTNANQTVTYVYEKADGAPVTVKYVDADGNELATSDTLNGKIDAPYQTTAKS LSGWAVKTTPTNATGVFTNANQTVTYVYEKADGAPVTVKYVDVDGNELATSDTLNGKIDAPYQSTAKSITGWTVKTTPAN ATGVFTNANQTVTYVYEKADGAPVTVKYVDADGNELATSDTLNGKIDAPYQSTAKSITGWAVKTTPANATGVFTNANQTV TYVYEKADGAPVTVKYVDVDGNELATPDTLNGKLDTSYAATAKNLSGWKLTATPANANGVFTTDAQTVTFVYAKQEDNPK KEDKNKTPIKISENKPTASKVTRIKKQTKLPKTGDNQQDSILFGLIGTCFVLLGIYSISKKNS
Specific function: Involved in several steps of L.monocytogenes infection [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 5 MucBP domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009459 - InterPro: IPR019931 - InterPro: IPR001899 [H]
Pfam domain/function: PF06458 MucBP [H]
EC number: NA
Molecular weight: Translated: 93023; Mature: 93023
Theoretical pI: Translated: 4.54; Mature: 4.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKAIKIMLVLFLMTTVFLPFSNVRAASTDVVNIPDPYLNEGLKSIVGNPFLTELTEANL CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCHHHHHHHCCC ETISVADISYMNGVPGYAVTGLISDLTGLEKAVNMTKLYFSNQTEIKNLNQIKDLPNLKK EEEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHCCCCHHH IVGVTTGLNDIKALGEMPALEELELGGDYITDFTPLLEKDNLKSFSYNSYAWLNPAYHQI HHEECCCHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCEEEECHHHHHC DNEEFKKFTNLKSLESLDVTWNNITDLSSLTANDHITNLNLSYNKFTNIAPIATMKELKV CHHHHHHHHCCCCCCEEEEEECCCCCHHHCCCCCCEEEEEEEHHHCCCCCCCEEEEEEEE LYLNNNNLTSIDSLNTLRGLTIAYADNNNITDLSNLKDFFEGMDVVGDYKGLQVNNQTIT EEECCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCHHHHCCCCCEEECCCEEE LPTINIKEGGTAISNNPTLDIDGEKMPVSSISDGGTVSTDNKTVSFTNLPVGNKTVTYKA EEEEEECCCCEEECCCCEEEECCCCCCCCCCCCCCEEECCCCEEEEEECCCCCEEEEEEE TFTATSTKGVPLSYSIKVSQPINVSAQSDSTVNVFYKDENGDELAPSETISGKSGENYQT EEEECCCCCCCEEEEEEECCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHH IEKTITNYTLKEIEGQPSGQFGDSDATVTYVYEKADGAPVTVKYVDVDGNELATSDTLNG HHHHHHCCCHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEECCCCCCC KIDAPYQSTAKSITGWTVKTTPANATGVFTNANQTVTYVYEKADGAPVTVKYVDADGNEL EECCCHHHHHHHHCCCEEEECCCCCCEEEECCCCEEEEEEECCCCCEEEEEEEECCCCEE ATSDTLNGKIDAPYQTTAKSLSGWAVKTTPTNATGVFTNANQTVTYVYEKADGAPVTVKY ECCCCCCCEECCCHHHHHHCCCCCEEEECCCCCCEEEECCCCEEEEEEECCCCCEEEEEE VDVDGNELATSDTLNGKIDAPYQSTAKSITGWTVKTTPANATGVFTNANQTVTYVYEKAD EECCCCCEECCCCCCCEECCCHHHHHHHHCCCEEEECCCCCCEEEECCCCEEEEEEECCC GAPVTVKYVDADGNELATSDTLNGKIDAPYQSTAKSITGWAVKTTPANATGVFTNANQTV CCEEEEEEEECCCCEEECCCCCCCEECCCHHHHHHHHCCEEEEECCCCCCEEEECCCCEE TYVYEKADGAPVTVKYVDVDGNELATPDTLNGKLDTSYAATAKNLSGWKLTATPANANGV EEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCE FTTDAQTVTFVYAKQEDNPKKEDKNKTPIKISENKPTASKVTRIKKQTKLPKTGDNQQDS EEECCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCC ILFGLIGTCFVLLGIYSISKKNS CHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MQKAIKIMLVLFLMTTVFLPFSNVRAASTDVVNIPDPYLNEGLKSIVGNPFLTELTEANL CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCHHHHHHHCCC ETISVADISYMNGVPGYAVTGLISDLTGLEKAVNMTKLYFSNQTEIKNLNQIKDLPNLKK EEEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHCCCCHHH IVGVTTGLNDIKALGEMPALEELELGGDYITDFTPLLEKDNLKSFSYNSYAWLNPAYHQI HHEECCCHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCEEEECHHHHHC DNEEFKKFTNLKSLESLDVTWNNITDLSSLTANDHITNLNLSYNKFTNIAPIATMKELKV CHHHHHHHHCCCCCCEEEEEECCCCCHHHCCCCCCEEEEEEEHHHCCCCCCCEEEEEEEE LYLNNNNLTSIDSLNTLRGLTIAYADNNNITDLSNLKDFFEGMDVVGDYKGLQVNNQTIT EEECCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCHHHHCCCCCEEECCCEEE LPTINIKEGGTAISNNPTLDIDGEKMPVSSISDGGTVSTDNKTVSFTNLPVGNKTVTYKA EEEEEECCCCEEECCCCEEEECCCCCCCCCCCCCCEEECCCCEEEEEECCCCCEEEEEEE TFTATSTKGVPLSYSIKVSQPINVSAQSDSTVNVFYKDENGDELAPSETISGKSGENYQT EEEECCCCCCCEEEEEEECCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHH IEKTITNYTLKEIEGQPSGQFGDSDATVTYVYEKADGAPVTVKYVDVDGNELATSDTLNG HHHHHHCCCHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEECCCCCCC KIDAPYQSTAKSITGWTVKTTPANATGVFTNANQTVTYVYEKADGAPVTVKYVDADGNEL EECCCHHHHHHHHCCCEEEECCCCCCEEEECCCCEEEEEEECCCCCEEEEEEEECCCCEE ATSDTLNGKIDAPYQTTAKSLSGWAVKTTPTNATGVFTNANQTVTYVYEKADGAPVTVKY ECCCCCCCEECCCHHHHHHCCCCCEEEECCCCCCEEEECCCCEEEEEEECCCCCEEEEEE VDVDGNELATSDTLNGKIDAPYQSTAKSITGWTVKTTPANATGVFTNANQTVTYVYEKAD EECCCCCEECCCCCCCEECCCHHHHHHHHCCCEEEECCCCCCEEEECCCCEEEEEEECCC GAPVTVKYVDADGNELATSDTLNGKIDAPYQSTAKSITGWAVKTTPANATGVFTNANQTV CCEEEEEEEECCCCEEECCCCCCCEECCCHHHHHHHHCCEEEEECCCCCCEEEECCCCEE TYVYEKADGAPVTVKYVDVDGNELATPDTLNGKLDTSYAATAKNLSGWKLTATPANANGV EEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCE FTTDAQTVTFVYAKQEDNPKKEDKNKTPIKISENKPTASKVTRIKKQTKLPKTGDNQQDS EEECCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCC ILFGLIGTCFVLLGIYSISKKNS CHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA