Definition Listeria monocytogenes Clip81459, complete genome.
Accession NC_012488
Length 2,912,690

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The map label for this gene is inlJ [H]

Identifier: 226224947

GI number: 226224947

Start: 2442456

End: 2445047

Strand: Direct

Name: inlJ [H]

Synonym: Lm4b_02368

Alternate gene names: 226224947

Gene position: 2442456-2445047 (Clockwise)

Preceding gene: 226224944

Following gene: 226224948

Centisome position: 83.86

GC content: 37.65

Gene sequence:

>2592_bases
ATGCAAAAAGCAATCAAAATAATGTTAGTTTTATTTTTAATGACAACCGTATTTTTACCTTTTAGTAATGTTCGGGCAGC
ATCAACTGATGTAGTAAATATACCAGATCCGTATTTAAACGAAGGTCTTAAGAGCATCGTAGGAAATCCATTCTTAACCG
AATTGACTGAAGCGAATCTTGAAACCATTAGTGTCGCTGATATCTCTTATATGAATGGAGTACCTGGTTATGCTGTCACT
GGTTTAATTAGTGATTTAACCGGACTCGAAAAAGCAGTTAATATGACCAAATTATATTTTTCAAACCAAACAGAAATTAA
AAATTTAAATCAAATAAAAGATTTACCTAATCTGAAGAAAATTGTTGGTGTTACTACAGGTTTAAATGATATTAAAGCCC
TTGGTGAAATGCCCGCACTCGAAGAACTAGAATTAGGTGGGGATTATATTACTGATTTCACTCCCTTACTTGAAAAAGAT
AATTTAAAATCATTTTCTTATAACTCGTATGCTTGGTTAAATCCAGCATATCACCAAATTGATAATGAAGAATTTAAAAA
ATTTACAAACCTTAAATCACTCGAAAGTTTAGATGTAACTTGGAATAACATTACCGACTTATCATCATTAACTGCAAATG
ATCATATTACAAACTTAAATCTAAGTTACAATAAGTTCACTAATATAGCTCCAATTGCTACAATGAAAGAACTTAAAGTC
CTTTATTTAAACAATAACAACCTAACTTCCATTGATTCTTTAAATACACTAAGAGGATTAACTATAGCCTATGCTGATAA
TAATAACATTACTGATTTGAGTAATTTAAAAGACTTTTTTGAAGGCATGGATGTCGTTGGAGATTATAAAGGTTTACAAG
TTAACAACCAAACTATCACACTTCCAACTATTAATATCAAAGAAGGTGGAACAGCTATTTCAAATAACCCTACTTTAGAT
ATTGATGGCGAAAAAATGCCTGTTTCTAGCATTTCTGATGGCGGAACAGTATCTACCGATAATAAAACCGTTTCTTTTAC
TAACTTACCAGTTGGAAATAAGACTGTTACTTATAAAGCAACATTCACAGCTACCTCCACTAAAGGAGTACCACTTAGTT
ATTCTATTAAAGTATCGCAACCAATTAATGTATCTGCACAATCCGATTCAACAGTAAACGTATTTTACAAAGATGAAAAT
GGCGATGAATTAGCTCCAAGTGAAACAATTTCTGGTAAATCCGGAGAAAATTATCAAACAATAGAAAAAACAATTACTAA
CTACACATTAAAAGAAATTGAAGGCCAGCCTTCAGGACAATTTGGCGATAGTGATGCAACAGTCACTTACGTTTACGAAA
AAGCAGACGGCGCTCCTGTTACCGTGAAATATGTCGACGTGGATGGCAACGAATTAGCTACTTCCGACACACTGAACGGC
AAAATTGATGCTCCTTATCAATCTACAGCCAAAAGCATCACTGGTTGGACGGTCAAAACGACTCCTGCCAATGCAACGGG
CGTATTCACAAACGCTAACCAAACGGTCACTTATGTGTATGAAAAAGCGGATGGCGCTCCTGTTACCGTGAAATATGTCG
ACGCGGATGGCAACGAATTAGCTACTTCCGACACACTGAACGGCAAAATTGATGCTCCTTATCAAACTACCGCTAAAAGT
CTTTCTGGTTGGGCAGTCAAAACGACTCCAACCAACGCAACGGGCGTATTCACAAACGCTAACCAAACGGTCACTTATGT
GTACGAAAAAGCGGACGGCGCTCCTGTTACCGTGAAATATGTCGACGTGGATGGCAACGAATTAGCTACTTCCGACACAC
TGAACGGCAAAATTGATGCTCCTTATCAATCTACAGCCAAAAGCATCACTGGTTGGACGGTCAAAACGACTCCTGCCAAT
GCAACGGGCGTATTCACAAACGCTAACCAAACGGTCACTTATGTGTACGAAAAAGCGGACGGCGCTCCTGTTACCGTGAA
ATATGTCGACGCGGATGGCAACGAATTAGCTACTTCCGACACACTGAACGGCAAAATTGATGCTCCTTATCAATCTACAG
CCAAAAGCATCACTGGTTGGGCAGTCAAAACGACTCCTGCCAATGCAACGGGCGTATTCACAAACGCTAACCAAACGGTC
ACTTATGTGTACGAAAAAGCGGACGGCGCTCCTGTTACCGTGAAATATGTCGACGTGGATGGCAACGAATTAGCTACTCC
AGATACATTGAACGGTAAGCTAGATACATCTTACGCGGCAACAGCTAAAAACTTGAGTGGTTGGAAGCTAACAGCCACAC
CAGCCAACGCTAATGGCGTATTTACAACTGATGCTCAAACAGTCACCTTTGTATATGCTAAACAAGAAGACAATCCTAAA
AAAGAGGATAAAAACAAAACACCTATTAAAATCAGCGAAAACAAACCAACAGCAAGCAAAGTAACTAGAATCAAAAAACA
AACAAAATTACCGAAAACTGGTGATAATCAACAAGATAGTATATTGTTTGGATTAATTGGTACATGTTTCGTTCTCTTAG
GAATTTACTCTATCTCTAAGAAAAACAGCTAA

Upstream 100 bases:

>100_bases
AAATACTACTTTAATCAATTAATTTTGTTGTTGAAATAGTTAATTTTAACGAATAAATAATTACGAATACATTTCAAAAA
ACAAGGAGGAAATTAAACAT

Downstream 100 bases:

>100_bases
AATAAATAGCTAAAACTCTCTTATCAATTGGATAAGAGAGTTTTTGTTTGGTAATTACTTCATATTGCACTACTTCCAAC
CTCAGGAAACCCAATTTAAT

Product: Cell wall surface anchor family protein (LPXTG motif)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 863; Mature: 863

Protein sequence:

>863_residues
MQKAIKIMLVLFLMTTVFLPFSNVRAASTDVVNIPDPYLNEGLKSIVGNPFLTELTEANLETISVADISYMNGVPGYAVT
GLISDLTGLEKAVNMTKLYFSNQTEIKNLNQIKDLPNLKKIVGVTTGLNDIKALGEMPALEELELGGDYITDFTPLLEKD
NLKSFSYNSYAWLNPAYHQIDNEEFKKFTNLKSLESLDVTWNNITDLSSLTANDHITNLNLSYNKFTNIAPIATMKELKV
LYLNNNNLTSIDSLNTLRGLTIAYADNNNITDLSNLKDFFEGMDVVGDYKGLQVNNQTITLPTINIKEGGTAISNNPTLD
IDGEKMPVSSISDGGTVSTDNKTVSFTNLPVGNKTVTYKATFTATSTKGVPLSYSIKVSQPINVSAQSDSTVNVFYKDEN
GDELAPSETISGKSGENYQTIEKTITNYTLKEIEGQPSGQFGDSDATVTYVYEKADGAPVTVKYVDVDGNELATSDTLNG
KIDAPYQSTAKSITGWTVKTTPANATGVFTNANQTVTYVYEKADGAPVTVKYVDADGNELATSDTLNGKIDAPYQTTAKS
LSGWAVKTTPTNATGVFTNANQTVTYVYEKADGAPVTVKYVDVDGNELATSDTLNGKIDAPYQSTAKSITGWTVKTTPAN
ATGVFTNANQTVTYVYEKADGAPVTVKYVDADGNELATSDTLNGKIDAPYQSTAKSITGWAVKTTPANATGVFTNANQTV
TYVYEKADGAPVTVKYVDVDGNELATPDTLNGKLDTSYAATAKNLSGWKLTATPANANGVFTTDAQTVTFVYAKQEDNPK
KEDKNKTPIKISENKPTASKVTRIKKQTKLPKTGDNQQDSILFGLIGTCFVLLGIYSISKKNS

Sequences:

>Translated_863_residues
MQKAIKIMLVLFLMTTVFLPFSNVRAASTDVVNIPDPYLNEGLKSIVGNPFLTELTEANLETISVADISYMNGVPGYAVT
GLISDLTGLEKAVNMTKLYFSNQTEIKNLNQIKDLPNLKKIVGVTTGLNDIKALGEMPALEELELGGDYITDFTPLLEKD
NLKSFSYNSYAWLNPAYHQIDNEEFKKFTNLKSLESLDVTWNNITDLSSLTANDHITNLNLSYNKFTNIAPIATMKELKV
LYLNNNNLTSIDSLNTLRGLTIAYADNNNITDLSNLKDFFEGMDVVGDYKGLQVNNQTITLPTINIKEGGTAISNNPTLD
IDGEKMPVSSISDGGTVSTDNKTVSFTNLPVGNKTVTYKATFTATSTKGVPLSYSIKVSQPINVSAQSDSTVNVFYKDEN
GDELAPSETISGKSGENYQTIEKTITNYTLKEIEGQPSGQFGDSDATVTYVYEKADGAPVTVKYVDVDGNELATSDTLNG
KIDAPYQSTAKSITGWTVKTTPANATGVFTNANQTVTYVYEKADGAPVTVKYVDADGNELATSDTLNGKIDAPYQTTAKS
LSGWAVKTTPTNATGVFTNANQTVTYVYEKADGAPVTVKYVDVDGNELATSDTLNGKIDAPYQSTAKSITGWTVKTTPAN
ATGVFTNANQTVTYVYEKADGAPVTVKYVDADGNELATSDTLNGKIDAPYQSTAKSITGWAVKTTPANATGVFTNANQTV
TYVYEKADGAPVTVKYVDVDGNELATPDTLNGKLDTSYAATAKNLSGWKLTATPANANGVFTTDAQTVTFVYAKQEDNPK
KEDKNKTPIKISENKPTASKVTRIKKQTKLPKTGDNQQDSILFGLIGTCFVLLGIYSISKKNS
>Mature_863_residues
MQKAIKIMLVLFLMTTVFLPFSNVRAASTDVVNIPDPYLNEGLKSIVGNPFLTELTEANLETISVADISYMNGVPGYAVT
GLISDLTGLEKAVNMTKLYFSNQTEIKNLNQIKDLPNLKKIVGVTTGLNDIKALGEMPALEELELGGDYITDFTPLLEKD
NLKSFSYNSYAWLNPAYHQIDNEEFKKFTNLKSLESLDVTWNNITDLSSLTANDHITNLNLSYNKFTNIAPIATMKELKV
LYLNNNNLTSIDSLNTLRGLTIAYADNNNITDLSNLKDFFEGMDVVGDYKGLQVNNQTITLPTINIKEGGTAISNNPTLD
IDGEKMPVSSISDGGTVSTDNKTVSFTNLPVGNKTVTYKATFTATSTKGVPLSYSIKVSQPINVSAQSDSTVNVFYKDEN
GDELAPSETISGKSGENYQTIEKTITNYTLKEIEGQPSGQFGDSDATVTYVYEKADGAPVTVKYVDVDGNELATSDTLNG
KIDAPYQSTAKSITGWTVKTTPANATGVFTNANQTVTYVYEKADGAPVTVKYVDADGNELATSDTLNGKIDAPYQTTAKS
LSGWAVKTTPTNATGVFTNANQTVTYVYEKADGAPVTVKYVDVDGNELATSDTLNGKIDAPYQSTAKSITGWTVKTTPAN
ATGVFTNANQTVTYVYEKADGAPVTVKYVDADGNELATSDTLNGKIDAPYQSTAKSITGWAVKTTPANATGVFTNANQTV
TYVYEKADGAPVTVKYVDVDGNELATPDTLNGKLDTSYAATAKNLSGWKLTATPANANGVFTTDAQTVTFVYAKQEDNPK
KEDKNKTPIKISENKPTASKVTRIKKQTKLPKTGDNQQDSILFGLIGTCFVLLGIYSISKKNS

Specific function: Involved in several steps of L.monocytogenes infection [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted, cell wall; Peptidoglycan-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 MucBP domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009459
- InterPro:   IPR019931
- InterPro:   IPR001899 [H]

Pfam domain/function: PF06458 MucBP [H]

EC number: NA

Molecular weight: Translated: 93023; Mature: 93023

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKAIKIMLVLFLMTTVFLPFSNVRAASTDVVNIPDPYLNEGLKSIVGNPFLTELTEANL
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCHHHHHHHCCC
ETISVADISYMNGVPGYAVTGLISDLTGLEKAVNMTKLYFSNQTEIKNLNQIKDLPNLKK
EEEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHCCCCHHH
IVGVTTGLNDIKALGEMPALEELELGGDYITDFTPLLEKDNLKSFSYNSYAWLNPAYHQI
HHEECCCHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCEEEECHHHHHC
DNEEFKKFTNLKSLESLDVTWNNITDLSSLTANDHITNLNLSYNKFTNIAPIATMKELKV
CHHHHHHHHCCCCCCEEEEEECCCCCHHHCCCCCCEEEEEEEHHHCCCCCCCEEEEEEEE
LYLNNNNLTSIDSLNTLRGLTIAYADNNNITDLSNLKDFFEGMDVVGDYKGLQVNNQTIT
EEECCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCHHHHCCCCCEEECCCEEE
LPTINIKEGGTAISNNPTLDIDGEKMPVSSISDGGTVSTDNKTVSFTNLPVGNKTVTYKA
EEEEEECCCCEEECCCCEEEECCCCCCCCCCCCCCEEECCCCEEEEEECCCCCEEEEEEE
TFTATSTKGVPLSYSIKVSQPINVSAQSDSTVNVFYKDENGDELAPSETISGKSGENYQT
EEEECCCCCCCEEEEEEECCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHH
IEKTITNYTLKEIEGQPSGQFGDSDATVTYVYEKADGAPVTVKYVDVDGNELATSDTLNG
HHHHHHCCCHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEECCCCCCC
KIDAPYQSTAKSITGWTVKTTPANATGVFTNANQTVTYVYEKADGAPVTVKYVDADGNEL
EECCCHHHHHHHHCCCEEEECCCCCCEEEECCCCEEEEEEECCCCCEEEEEEEECCCCEE
ATSDTLNGKIDAPYQTTAKSLSGWAVKTTPTNATGVFTNANQTVTYVYEKADGAPVTVKY
ECCCCCCCEECCCHHHHHHCCCCCEEEECCCCCCEEEECCCCEEEEEEECCCCCEEEEEE
VDVDGNELATSDTLNGKIDAPYQSTAKSITGWTVKTTPANATGVFTNANQTVTYVYEKAD
EECCCCCEECCCCCCCEECCCHHHHHHHHCCCEEEECCCCCCEEEECCCCEEEEEEECCC
GAPVTVKYVDADGNELATSDTLNGKIDAPYQSTAKSITGWAVKTTPANATGVFTNANQTV
CCEEEEEEEECCCCEEECCCCCCCEECCCHHHHHHHHCCEEEEECCCCCCEEEECCCCEE
TYVYEKADGAPVTVKYVDVDGNELATPDTLNGKLDTSYAATAKNLSGWKLTATPANANGV
EEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCE
FTTDAQTVTFVYAKQEDNPKKEDKNKTPIKISENKPTASKVTRIKKQTKLPKTGDNQQDS
EEECCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCC
ILFGLIGTCFVLLGIYSISKKNS
CHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQKAIKIMLVLFLMTTVFLPFSNVRAASTDVVNIPDPYLNEGLKSIVGNPFLTELTEANL
CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHCCCHHHHHHHCCC
ETISVADISYMNGVPGYAVTGLISDLTGLEKAVNMTKLYFSNQTEIKNLNQIKDLPNLKK
EEEEEEEEHHHCCCCCHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHCCCCHHH
IVGVTTGLNDIKALGEMPALEELELGGDYITDFTPLLEKDNLKSFSYNSYAWLNPAYHQI
HHEECCCHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCEEEECHHHHHC
DNEEFKKFTNLKSLESLDVTWNNITDLSSLTANDHITNLNLSYNKFTNIAPIATMKELKV
CHHHHHHHHCCCCCCEEEEEECCCCCHHHCCCCCCEEEEEEEHHHCCCCCCCEEEEEEEE
LYLNNNNLTSIDSLNTLRGLTIAYADNNNITDLSNLKDFFEGMDVVGDYKGLQVNNQTIT
EEECCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCHHHHCCCCCEEECCCEEE
LPTINIKEGGTAISNNPTLDIDGEKMPVSSISDGGTVSTDNKTVSFTNLPVGNKTVTYKA
EEEEEECCCCEEECCCCEEEECCCCCCCCCCCCCCEEECCCCEEEEEECCCCCEEEEEEE
TFTATSTKGVPLSYSIKVSQPINVSAQSDSTVNVFYKDENGDELAPSETISGKSGENYQT
EEEECCCCCCCEEEEEEECCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHH
IEKTITNYTLKEIEGQPSGQFGDSDATVTYVYEKADGAPVTVKYVDVDGNELATSDTLNG
HHHHHHCCCHHHCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEEECCCCCEECCCCCCC
KIDAPYQSTAKSITGWTVKTTPANATGVFTNANQTVTYVYEKADGAPVTVKYVDADGNEL
EECCCHHHHHHHHCCCEEEECCCCCCEEEECCCCEEEEEEECCCCCEEEEEEEECCCCEE
ATSDTLNGKIDAPYQTTAKSLSGWAVKTTPTNATGVFTNANQTVTYVYEKADGAPVTVKY
ECCCCCCCEECCCHHHHHHCCCCCEEEECCCCCCEEEECCCCEEEEEEECCCCCEEEEEE
VDVDGNELATSDTLNGKIDAPYQSTAKSITGWTVKTTPANATGVFTNANQTVTYVYEKAD
EECCCCCEECCCCCCCEECCCHHHHHHHHCCCEEEECCCCCCEEEECCCCEEEEEEECCC
GAPVTVKYVDADGNELATSDTLNGKIDAPYQSTAKSITGWAVKTTPANATGVFTNANQTV
CCEEEEEEEECCCCEEECCCCCCCEECCCHHHHHHHHCCEEEEECCCCCCEEEECCCCEE
TYVYEKADGAPVTVKYVDVDGNELATPDTLNGKLDTSYAATAKNLSGWKLTATPANANGV
EEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCE
FTTDAQTVTFVYAKQEDNPKKEDKNKTPIKISENKPTASKVTRIKKQTKLPKTGDNQQDS
EEECCCEEEEEEEECCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCC
ILFGLIGTCFVLLGIYSISKKNS
CHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA