| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is yuiD [H]
Identifier: 226224938
GI number: 226224938
Start: 2433438
End: 2433911
Strand: Direct
Name: yuiD [H]
Synonym: Lm4b_02358
Alternate gene names: 226224938
Gene position: 2433438-2433911 (Clockwise)
Preceding gene: 226224936
Following gene: 226224939
Centisome position: 83.55
GC content: 40.93
Gene sequence:
>474_bases ATGTCGATATTTACGAATACACCATTAATTGCATCTATTATTGCGATTGTGTTTGCCCAAGTGGTCAAAGTTCCGATTCA TATTTTAGTATACCGAAAGTTTAACCTCGGACTAATGTTTTCCACTGGTGGTATGCCTAGCTCTCACTCGGCTGCGGTTA CTGCGCTAATGACAACACTCGCAATTGAATACGGGCTCGATTCACCTTATTTCGCGATTGCTGTTGTATTTGGTATTATC GTGATGTTCGATGCGACTGGCGTTAGAAGACAAGCCGGTGAACAAGCAGTTGTTTTAAACAAATTAGTAACGGATTTCCA AGACTTCGTGGAACATGCAAAAGGGCTCGCGGCACCTGAACAAGAAGAAAAAACGAAGCATTTAAAAGAATTACTTGGCC ATAAACCGATGGAAGTTTTCTTCGGAGCACTTACCGGGATTGCGATTGGATTCATTTTAGAAATGTTTATGTAA
Upstream 100 bases:
>100_bases ATACTTTATTATATAAGAGTTGGTAGAAAAACTCTAGAAAAGGTTTTTAATAAGCTCATTGTGGTAAAATAAGAATAGAC TTTTTGACAGGAGAGATTTG
Downstream 100 bases:
>100_bases ATGAAAAGTTGACTCCTTGTAGTCAACTTTTTTTGTTTGTCGTTAGTTTACAGCTTTATGTTAGAGGGAAAATCATGATA TCAACAGATTTTACAAAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MSIFTNTPLIASIIAIVFAQVVKVPIHILVYRKFNLGLMFSTGGMPSSHSAAVTALMTTLAIEYGLDSPYFAIAVVFGII VMFDATGVRRQAGEQAVVLNKLVTDFQDFVEHAKGLAAPEQEEKTKHLKELLGHKPMEVFFGALTGIAIGFILEMFM
Sequences:
>Translated_157_residues MSIFTNTPLIASIIAIVFAQVVKVPIHILVYRKFNLGLMFSTGGMPSSHSAAVTALMTTLAIEYGLDSPYFAIAVVFGII VMFDATGVRRQAGEQAVVLNKLVTDFQDFVEHAKGLAAPEQEEKTKHLKELLGHKPMEVFFGALTGIAIGFILEMFM >Mature_156_residues SIFTNTPLIASIIAIVFAQVVKVPIHILVYRKFNLGLMFSTGGMPSSHSAAVTALMTTLAIEYGLDSPYFAIAVVFGIIV MFDATGVRRQAGEQAVVLNKLVTDFQDFVEHAKGLAAPEQEEKTKHLKELLGHKPMEVFFGALTGIAIGFILEMFM
Specific function: Unknown
COG id: COG1963
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003832 [H]
Pfam domain/function: PF02681 DUF212 [H]
EC number: NA
Molecular weight: Translated: 17121; Mature: 16989
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIFTNTPLIASIIAIVFAQVVKVPIHILVYRKFNLGLMFSTGGMPSSHSAAVTALMTTL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEECCCCCCCHHHHHHHHHHHH AIEYGLDSPYFAIAVVFGIIVMFDATGVRRQAGEQAVVLNKLVTDFQDFVEHAKGLAAPE HHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC QEEKTKHLKELLGHKPMEVFFGALTGIAIGFILEMFM HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SIFTNTPLIASIIAIVFAQVVKVPIHILVYRKFNLGLMFSTGGMPSSHSAAVTALMTTL CCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCEEEEECCCCCCCHHHHHHHHHHHH AIEYGLDSPYFAIAVVFGIIVMFDATGVRRQAGEQAVVLNKLVTDFQDFVEHAKGLAAPE HHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC QEEKTKHLKELLGHKPMEVFFGALTGIAIGFILEMFM HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]