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The map label for this gene is coiA [H]

Identifier: 226224797

GI number: 226224797

Start: 2283343

End: 2284458

Strand: Reverse

Name: coiA [H]

Synonym: Lm4b_02216

Alternate gene names: 226224797

Gene position: 2284458-2283343 (Counterclockwise)

Preceding gene: 226224798

Following gene: 226224796

Centisome position: 78.43

GC content: 34.32

Gene sequence:

>1116_bases
GTGATAATTATTTTTACAGCCAGAAATAACATGGGAGAAACTTTTACTATTACTAAGATGAATGTGGAACGAATCAAGCA
AGAAGAAAGACTGTTTTGTAAGTCTTGTGCAAGCCCAGTAATGATAAAAGCAGGACAGATAAAAATACCGCACTTTGCCC
ACGAGAAGACAATGAAGTGTGCATTTGCTTCTGAAGGGGAGAGCGAGGAACATTTAGCAGCTAAAAAACAAATCATGGCC
TGGTATTGCTATCAAAGTATTCCTGTGGAAGTGGAAAGTTATTTTCCAGAAATAAAACGACAAGCAGATATTTTTGTGAA
TGGGAAGGCAGTAATTGAATTTCAACGTTCTTCTATTTCAATTAGTGAAATGATTCAACGAACAATGGACTACTTATCAA
TTGGATTAGAAGTTCACTGGATACTCGGGCAAGTGGTTAGGAAGGAGAAGGGGCGTATTTGTCTTTCTGCATTCCAACAA
GCTTTTATTCAGTCTGACAAGAAATTGGGTTATCATTTTTGGCACTATTCTACTGAGCGAGAGATTTGTACACTTTATTA
TCATCTAACATTTGAAAAAGGAAATCGTTTTTTCGCAAGTGAAATGAAATTTTCTATGAAGGCACCTTTTAGTGAATGGA
AGAAGAAGTTAGCTAGAATTATTACACGCCATGCCTATGTAAAACGAGATAGAGAACTCGAAAGACAAAAAATTTGTTTT
TATTATGCTAAATTTAAAAAACATGGACAATTTATGCAAAAATTATTTAATGCCGGTTATTATTTGCATTATTTACCGAA
AGAGATAGGTGTGGATTTAGAAGAACAATTTTTAGTTATCACACCTGCTGTTGAATGGCAATTTGATTTGTGGGAAAAGT
TTTTTAAAGGTCTGGAGAAAGGAGATACTTTTAGCGAATGCTGCTTTTTTGAGAGTTTTCAATCAGTTGTAACCCAAATT
TTAACTATCTGGCTTTCTCCAAATGAAAGTTTGAAGTTAGGAAAATCATATCTTTCTTATTTGATTGGTGAAGGGGTGTT
ATCTACCATACCAGATAATCGATATCGTGTGAAACGGAAAATGGTTTTTACTAATACTCGAGCAGCACATATATAA

Upstream 100 bases:

>100_bases
GCTGAAAAATAGCCAAACGGGGCTTTTTTGTGATTTTAAAAATAAGAAAGGAATTTGGATGCTCCTTGGCGAATAATAAT
ATTAAAGAGCTAATAGGAGA

Downstream 100 bases:

>100_bases
TCATCTGTTTTGCTTTTTTAGTTATTTTGGCTCATAATAAAAACAAAATGACTATGGTTGGGGGTTTTAATATTGAGTAA
AACAAATGCATTACCTTTAA

Product: competence protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MIIIFTARNNMGETFTITKMNVERIKQEERLFCKSCASPVMIKAGQIKIPHFAHEKTMKCAFASEGESEEHLAAKKQIMA
WYCYQSIPVEVESYFPEIKRQADIFVNGKAVIEFQRSSISISEMIQRTMDYLSIGLEVHWILGQVVRKEKGRICLSAFQQ
AFIQSDKKLGYHFWHYSTEREICTLYYHLTFEKGNRFFASEMKFSMKAPFSEWKKKLARIITRHAYVKRDRELERQKICF
YYAKFKKHGQFMQKLFNAGYYLHYLPKEIGVDLEEQFLVITPAVEWQFDLWEKFFKGLEKGDTFSECCFFESFQSVVTQI
LTIWLSPNESLKLGKSYLSYLIGEGVLSTIPDNRYRVKRKMVFTNTRAAHI

Sequences:

>Translated_371_residues
MIIIFTARNNMGETFTITKMNVERIKQEERLFCKSCASPVMIKAGQIKIPHFAHEKTMKCAFASEGESEEHLAAKKQIMA
WYCYQSIPVEVESYFPEIKRQADIFVNGKAVIEFQRSSISISEMIQRTMDYLSIGLEVHWILGQVVRKEKGRICLSAFQQ
AFIQSDKKLGYHFWHYSTEREICTLYYHLTFEKGNRFFASEMKFSMKAPFSEWKKKLARIITRHAYVKRDRELERQKICF
YYAKFKKHGQFMQKLFNAGYYLHYLPKEIGVDLEEQFLVITPAVEWQFDLWEKFFKGLEKGDTFSECCFFESFQSVVTQI
LTIWLSPNESLKLGKSYLSYLIGEGVLSTIPDNRYRVKRKMVFTNTRAAHI
>Mature_371_residues
MIIIFTARNNMGETFTITKMNVERIKQEERLFCKSCASPVMIKAGQIKIPHFAHEKTMKCAFASEGESEEHLAAKKQIMA
WYCYQSIPVEVESYFPEIKRQADIFVNGKAVIEFQRSSISISEMIQRTMDYLSIGLEVHWILGQVVRKEKGRICLSAFQQ
AFIQSDKKLGYHFWHYSTEREICTLYYHLTFEKGNRFFASEMKFSMKAPFSEWKKKLARIITRHAYVKRDRELERQKICF
YYAKFKKHGQFMQKLFNAGYYLHYLPKEIGVDLEEQFLVITPAVEWQFDLWEKFFKGLEKGDTFSECCFFESFQSVVTQI
LTIWLSPNESLKLGKSYLSYLIGEGVLSTIPDNRYRVKRKMVFTNTRAAHI

Specific function: Required for optimal transformation [H]

COG id: COG4469

COG function: function code R; Competence protein

Gene ontology:

Cell location: Cytoplasm (Probable). Note=Localizes at the cell poles of most competence-expressing cells [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010330
- InterPro:   IPR021176 [H]

Pfam domain/function: PF06054 CoiA [H]

EC number: NA

Molecular weight: Translated: 43768; Mature: 43768

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIIFTARNNMGETFTITKMNVERIKQEERLFCKSCASPVMIKAGQIKIPHFAHEKTMKC
CEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCCEECCCCCCHHHHEE
AFASEGESEEHLAAKKQIMAWYCYQSIPVEVESYFPEIKRQADIFVNGKAVIEFQRSSIS
EECCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCEEECCEEEEEEECCCCC
ISEMIQRTMDYLSIGLEVHWILGQVVRKEKGRICLSAFQQAFIQSDKKLGYHFWHYSTER
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCC
EICTLYYHLTFEKGNRFFASEMKFSMKAPFSEWKKKLARIITRHAYVKRDRELERQKICF
CEEEEEEEEEEECCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YYAKFKKHGQFMQKLFNAGYYLHYLPKEIGVDLEEQFLVITPAVEWQFDLWEKFFKGLEK
HHHHHHHHHHHHHHHHHCCEEEEECCHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCC
GDTFSECCFFESFQSVVTQILTIWLSPNESLKLGKSYLSYLIGEGVLSTIPDNRYRVKRK
CCCHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHH
MVFTNTRAAHI
EEEECCCCCCC
>Mature Secondary Structure
MIIIFTARNNMGETFTITKMNVERIKQEERLFCKSCASPVMIKAGQIKIPHFAHEKTMKC
CEEEEEECCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEECCCEECCCCCCHHHHEE
AFASEGESEEHLAAKKQIMAWYCYQSIPVEVESYFPEIKRQADIFVNGKAVIEFQRSSIS
EECCCCCCHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCEEECCEEEEEEECCCCC
ISEMIQRTMDYLSIGLEVHWILGQVVRKEKGRICLSAFQQAFIQSDKKLGYHFWHYSTER
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCEEEEEECCCC
EICTLYYHLTFEKGNRFFASEMKFSMKAPFSEWKKKLARIITRHAYVKRDRELERQKICF
CEEEEEEEEEEECCCEEEHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YYAKFKKHGQFMQKLFNAGYYLHYLPKEIGVDLEEQFLVITPAVEWQFDLWEKFFKGLEK
HHHHHHHHHHHHHHHHHCCEEEEECCHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHCC
GDTFSECCFFESFQSVVTQILTIWLSPNESLKLGKSYLSYLIGEGVLSTIPDNRYRVKRK
CCCHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCHHHHCCCCHHHHHHH
MVFTNTRAAHI
EEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]