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The map label for this gene is yfiH [H]

Identifier: 226224767

GI number: 226224767

Start: 2244507

End: 2245475

Strand: Reverse

Name: yfiH [H]

Synonym: Lm4b_02185

Alternate gene names: 226224767

Gene position: 2245475-2244507 (Counterclockwise)

Preceding gene: 226224768

Following gene: 226224766

Centisome position: 77.09

GC content: 40.87

Gene sequence:

>969_bases
ATGAAATTAGGCGTATTTACACCATTATTTGCAAATTTATCATTGGATGAAATGTTAGATAAAGTAAAGGCGGCAGGACT
TGATGCTGTCGAAATCGGGACGGGCGGGAACCCTGGAAATCATCACTGTCCAACCGATGAACTTTTAGCGAGTGAAGCCG
CGCGGAAGGAATATTTAGAAAAATTTACTAGTCGAGGATTAACAATTAGTGCTTTTAGTTGCCACGATAACCCGATTTCT
CCTAATAAAGAGGAAGCGGCTGCATCTGATGAAATTTTGCGCAAATCAATCAAACTAGCCTCTTTAATGAATGTTCCGGT
TGTTAATACATTTTCGGGAACAGCGGGAGATAGTGACGATGCCAAAGCGCCGAACTGGCCGGTTATTCCTTGGCCAACTG
TTTATAGCGATATTAAAACTTGGCAATGGGAAACAAAATTAATCCCTTACTGGAAAGAAATTGGCGAACTTGCAGCAGCC
AGTGGCGTTAAAATTGGTATTGAACTGCATGGTGGTTTCTTATGCCATACGCCATATACCATTTTAAAACTGCGGGAAGA
AACAAATGATGCTATCGGCGTTAATTTAGATCCAAGCCATTTGTGGTGGCAAGGAATTGACCCAGTTGGCGCTATCAAAA
TCTTAGGAAAAGCTGGAGCGATTCATCATTTCCATGCTAAAGATACGTATTTAGATCAAGATAATATTAATATGTACGGT
TTAACGGATATGCAACCATATGGCGACGTTCAAACAAGAAGTTGGACATTCCGTTCGGTTGGTTGTGGGCACAGTTTGAC
AGAATGGTCGGACATTATGAGCGCGCTTAGAACATATGGTTATGATTATGTAGTCAGCATCGAGCACGAAGATCCATTAA
TGTCGATTGATGAAGGATTCGACCGTGCTGTTACAAACTTACAATCGATTTTAATTAAAGATAAACCACTGGATATGTGG
TGGGCTTAA

Upstream 100 bases:

>100_bases
AAGTAATTATTAACGGCGTACATTGGTGCGCGGAAGGTCGGAAGAATTATCCGGCATACGGAAATCACCAACCACTTGAA
AAAATAGGGAGGAAATAAAC

Downstream 100 bases:

>100_bases
CGATAAGAAAGGGTGTCTTAGGATGAAAAAATATCAATTAGTAATTATTGGTTACGGCGGGATGGGAAGCTATCATGTAA
CGCTTGCATCGGCTGCTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MKLGVFTPLFANLSLDEMLDKVKAAGLDAVEIGTGGNPGNHHCPTDELLASEAARKEYLEKFTSRGLTISAFSCHDNPIS
PNKEEAAASDEILRKSIKLASLMNVPVVNTFSGTAGDSDDAKAPNWPVIPWPTVYSDIKTWQWETKLIPYWKEIGELAAA
SGVKIGIELHGGFLCHTPYTILKLREETNDAIGVNLDPSHLWWQGIDPVGAIKILGKAGAIHHFHAKDTYLDQDNINMYG
LTDMQPYGDVQTRSWTFRSVGCGHSLTEWSDIMSALRTYGYDYVVSIEHEDPLMSIDEGFDRAVTNLQSILIKDKPLDMW
WA

Sequences:

>Translated_322_residues
MKLGVFTPLFANLSLDEMLDKVKAAGLDAVEIGTGGNPGNHHCPTDELLASEAARKEYLEKFTSRGLTISAFSCHDNPIS
PNKEEAAASDEILRKSIKLASLMNVPVVNTFSGTAGDSDDAKAPNWPVIPWPTVYSDIKTWQWETKLIPYWKEIGELAAA
SGVKIGIELHGGFLCHTPYTILKLREETNDAIGVNLDPSHLWWQGIDPVGAIKILGKAGAIHHFHAKDTYLDQDNINMYG
LTDMQPYGDVQTRSWTFRSVGCGHSLTEWSDIMSALRTYGYDYVVSIEHEDPLMSIDEGFDRAVTNLQSILIKDKPLDMW
WA
>Mature_322_residues
MKLGVFTPLFANLSLDEMLDKVKAAGLDAVEIGTGGNPGNHHCPTDELLASEAARKEYLEKFTSRGLTISAFSCHDNPIS
PNKEEAAASDEILRKSIKLASLMNVPVVNTFSGTAGDSDDAKAPNWPVIPWPTVYSDIKTWQWETKLIPYWKEIGELAAA
SGVKIGIELHGGFLCHTPYTILKLREETNDAIGVNLDPSHLWWQGIDPVGAIKILGKAGAIHHFHAKDTYLDQDNINMYG
LTDMQPYGDVQTRSWTFRSVGCGHSLTEWSDIMSALRTYGYDYVVSIEHEDPLMSIDEGFDRAVTNLQSILIKDKPLDMW
WA

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011418
- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2; PF07582 AP_endonuc_2_N [H]

EC number: NA

Molecular weight: Translated: 35708; Mature: 35708

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLGVFTPLFANLSLDEMLDKVKAAGLDAVEIGTGGNPGNHHCPTDELLASEAARKEYLE
CCCCCCCHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
KFTSRGLTISAFSCHDNPISPNKEEAAASDEILRKSIKLASLMNVPVVNTFSGTAGDSDD
HHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCC
AKAPNWPVIPWPTVYSDIKTWQWETKLIPYWKEIGELAAASGVKIGIELHGGFLCHTPYT
CCCCCCCCCCCCHHHHHHHHEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCEEEECCCE
ILKLREETNDAIGVNLDPSHLWWQGIDPVGAIKILGKAGAIHHFHAKDTYLDQDNINMYG
EEEECCCCCCEEEECCCCCHHEECCCCCCHHEEEECCCCCEEEEECCCCEECCCCCEEEE
LTDMQPYGDVQTRSWTFRSVGCGHSLTEWSDIMSALRTYGYDYVVSIEHEDPLMSIDEGF
CCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHH
DRAVTNLQSILIKDKPLDMWWA
HHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKLGVFTPLFANLSLDEMLDKVKAAGLDAVEIGTGGNPGNHHCPTDELLASEAARKEYLE
CCCCCCCHHHHCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHH
KFTSRGLTISAFSCHDNPISPNKEEAAASDEILRKSIKLASLMNVPVVNTFSGTAGDSDD
HHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCC
AKAPNWPVIPWPTVYSDIKTWQWETKLIPYWKEIGELAAASGVKIGIELHGGFLCHTPYT
CCCCCCCCCCCCHHHHHHHHEEEECCCCHHHHHHHHHHHCCCCEEEEEEECCEEEECCCE
ILKLREETNDAIGVNLDPSHLWWQGIDPVGAIKILGKAGAIHHFHAKDTYLDQDNINMYG
EEEECCCCCCEEEECCCCCHHEECCCCCCHHEEEECCCCCEEEEECCCCEECCCCCEEEE
LTDMQPYGDVQTRSWTFRSVGCGHSLTEWSDIMSALRTYGYDYVVSIEHEDPLMSIDEGF
CCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHH
DRAVTNLQSILIKDKPLDMWWA
HHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377; 8704981 [H]