Click here to switch to the map view.

The map label for this gene is 226224765

Identifier: 226224765

GI number: 226224765

Start: 2243156

End: 2243341

Strand: Reverse

Name: 226224765

Synonym: Lm4b_02183

Alternate gene names: NA

Gene position: 2243341-2243156 (Counterclockwise)

Preceding gene: 226224766

Following gene: 226224764

Centisome position: 77.02

GC content: 37.1

Gene sequence:

>186_bases
ATGAGCGAAGATAAAGGCATGAAAGACAAAGCAAAAGGACTTAAAGACAAAGTAGTAGGTGACGCAAAAGACAAGTTCGG
TAAAGCAACAGATGATAAAGGCAAACAAGTAGAAGGTAAAGCTCAAAAAGCTAAAGGCGAAGTAGAAGATAAAACTGGCG
ACGCTAAAAAGAAATTATCCGAATAA

Upstream 100 bases:

>100_bases
TATTTAAAAAAGATGTTTTAGCTTCCTAAACTGTGGAAAACACTACTATGGAGATAAAGAATTCTTCATTAGAAAATATT
CTAATTAGGAGGCAATATCA

Downstream 100 bases:

>100_bases
GTTAAAAAGAGCGGCTTGAATTTTTCAAGCCGCTCTTTTTTTGGTCCAATAATAGCAAAAGGTTTTGAATAATTTTACGG
AGGTATAAAAAGAAAGTATG

Product: YwmG protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 61; Mature: 60

Protein sequence:

>61_residues
MSEDKGMKDKAKGLKDKVVGDAKDKFGKATDDKGKQVEGKAQKAKGEVEDKTGDAKKKLSE

Sequences:

>Translated_61_residues
MSEDKGMKDKAKGLKDKVVGDAKDKFGKATDDKGKQVEGKAQKAKGEVEDKTGDAKKKLSE
>Mature_60_residues
SEDKGMKDKAKGLKDKVVGDAKDKFGKATDDKGKQVEGKAQKAKGEVEDKTGDAKKKLSE

Specific function: Unknown

COG id: COG3237

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0337 (CsbD) family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y2158_LISMO (Q929L4)

Other databases:

- EMBL:   AL591982
- PIR:   AI1714
- RefSeq:   NP_465682.1
- ProteinModelPortal:   Q929L4
- SMR:   Q929L4
- GeneID:   984441
- GenomeReviews:   AL591824_GR
- KEGG:   lmo:lmo2158
- GenoList:   LMO2158
- HOGENOM:   HBG704474
- ProtClustDB:   CLSK895034
- BioCyc:   LMON169963:LMO2158-MONOMER
- InterPro:   IPR008462
- Gene3D:   G3DSA:1.10.1470.10

Pfam domain/function: PF05532 CsbD; SSF69047 CsbD

EC number: NA

Molecular weight: Translated: 6554; Mature: 6423

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEDKGMKDKAKGLKDKVVGDAKDKFGKATDDKGKQVEGKAQKAKGEVEDKTGDAKKKLS
CCCCCCCCHHHCCHHHHHCCCCHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHCC
E
C
>Mature Secondary Structure 
SEDKGMKDKAKGLKDKVVGDAKDKFGKATDDKGKQVEGKAQKAKGEVEDKTGDAKKKLS
CCCCCCCHHHCCHHHHHCCCCHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHCC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669