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The map label for this gene is gatY [H]

Identifier: 226224741

GI number: 226224741

Start: 2219937

End: 2220791

Strand: Reverse

Name: gatY [H]

Synonym: Lm4b_02158

Alternate gene names: 226224741

Gene position: 2220791-2219937 (Counterclockwise)

Preceding gene: 226224742

Following gene: 226224740

Centisome position: 76.25

GC content: 40.23

Gene sequence:

>855_bases
ATGTATGTGTCCATGAAAGGTATGTTAGAACGTGCGAACAAGGAGCATTATGCAGTAATGGCAATTAATTGTTTTAATCT
GGAAACGGCTCGTGCAGTCATTGATGCTGCACAAGAACTTCGTGCGCCGATTATCATTGATTTACTTCAAGATCATTTGA
CAAGTCATCTAGGAAGTCGCTTTTTGACAAAACCCATTATAAAAATGGCAGAAGAAGCGAGTGTTGAAGTGGCAATTAAT
TTGGATCACGGGCATGATGTGGCGATAGTGAAGCAATGCTTAGCGGATGGTTTTTCTAGTGTGATGATGGATGCGTCTAG
TTTTCCTTATGAAGAAAATGTTGCAATTACGAAAAAAATGGTCGAGTTTGCAGAAGTTTATCATGCTAGTGTCGAGGCGG
AAGTTGGTAATATTGGTGCGGTGACTGGAGATAATTACACCAATCAAGAAATGTATACCGACCCCAAAGTGGCCATCGAT
TTTGCTAAACGAACAGGGATTGACGCTTTAGCAATTTCTTATGGTTCTTCCCATGGTGATTATCCAGAAGGTTTTACACC
GGCTTTCCAGTTTGATATTGTCAGAGAAATCAAATCCGCGACAAACATGCCGCTCGTTTTGCACGGAGGTTCTGGTTGCG
GGGCGGAAAATATTCGAGAATCCGTTCGACTGGGCATCAATAAAATCAATGTTGGCTCCGACTTCATGAAAGCACAAGTA
AATCAAATAAAAACGAATTTAAAAGAAAATCCGGCCGTTAACTATGTGGACTTAATTCATGAAACGATAAAAGCCGGCAC
AAAAGCTGTTAAAAATTATATTCAACTATCCGGTTCAACCGGAAAATCACTTTAA

Upstream 100 bases:

>100_bases
CTACTAAAGAAGAAGAACTCATTGCTGACCAAGGATTAGAAGAGGAAGATGAAGTTGATCTGTCTGGAATTAAAATTTCA
TAAGGTGAGGAGATTTTGAA

Downstream 100 bases:

>100_bases
AAGGAGAAATGAAAATATGTTAGTAAATATGAAACAATTATTAGAAGTAGCTAAGGAAAACAAATTCGCGGTGGGAGCAT
TTAATGTTGCAGACAGTAAC

Product: fructose-1,6-biphosphate aldolase type II

Products: NA

Alternate protein names: TBPA; TagBP aldolase; D-tagatose-bisphosphate aldolase class II; Tagatose-bisphosphate aldolase [H]

Number of amino acids: Translated: 284; Mature: 284

Protein sequence:

>284_residues
MYVSMKGMLERANKEHYAVMAINCFNLETARAVIDAAQELRAPIIIDLLQDHLTSHLGSRFLTKPIIKMAEEASVEVAIN
LDHGHDVAIVKQCLADGFSSVMMDASSFPYEENVAITKKMVEFAEVYHASVEAEVGNIGAVTGDNYTNQEMYTDPKVAID
FAKRTGIDALAISYGSSHGDYPEGFTPAFQFDIVREIKSATNMPLVLHGGSGCGAENIRESVRLGINKINVGSDFMKAQV
NQIKTNLKENPAVNYVDLIHETIKAGTKAVKNYIQLSGSTGKSL

Sequences:

>Translated_284_residues
MYVSMKGMLERANKEHYAVMAINCFNLETARAVIDAAQELRAPIIIDLLQDHLTSHLGSRFLTKPIIKMAEEASVEVAIN
LDHGHDVAIVKQCLADGFSSVMMDASSFPYEENVAITKKMVEFAEVYHASVEAEVGNIGAVTGDNYTNQEMYTDPKVAID
FAKRTGIDALAISYGSSHGDYPEGFTPAFQFDIVREIKSATNMPLVLHGGSGCGAENIRESVRLGINKINVGSDFMKAQV
NQIKTNLKENPAVNYVDLIHETIKAGTKAVKNYIQLSGSTGKSL
>Mature_284_residues
MYVSMKGMLERANKEHYAVMAINCFNLETARAVIDAAQELRAPIIIDLLQDHLTSHLGSRFLTKPIIKMAEEASVEVAIN
LDHGHDVAIVKQCLADGFSSVMMDASSFPYEENVAITKKMVEFAEVYHASVEAEVGNIGAVTGDNYTNQEMYTDPKVAID
FAKRTGIDALAISYGSSHGDYPEGFTPAFQFDIVREIKSATNMPLVLHGGSGCGAENIRESVRLGINKINVGSDFMKAQV
NQIKTNLKENPAVNYVDLIHETIKAGTKAVKNYIQLSGSTGKSL

Specific function: Catalytic subunit of the tagatose-1,6-bisphosphate aldolase GatYZ, which catalyzes the reversible aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to produce tagatose 1,6- bisphosphate (T

COG id: COG0191

COG function: function code G; Fructose/tagatose bisphosphate aldolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class II fructose-bisphosphate aldolase family. TagBP aldolase GatY subfamily [H]

Homologues:

Organism=Escherichia coli, GI87082041, Length=287, Percent_Identity=36.9337979094077, Blast_Score=172, Evalue=2e-44,
Organism=Escherichia coli, GI1788072, Length=273, Percent_Identity=35.1648351648352, Blast_Score=164, Evalue=8e-42,
Organism=Escherichia coli, GI1789526, Length=286, Percent_Identity=31.8181818181818, Blast_Score=150, Evalue=1e-37,
Organism=Escherichia coli, GI1789293, Length=299, Percent_Identity=26.4214046822742, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000771
- InterPro:   IPR011288 [H]

Pfam domain/function: PF01116 F_bP_aldolase [H]

EC number: =4.1.2.40 [H]

Molecular weight: Translated: 30979; Mature: 30979

Theoretical pI: Translated: 5.58; Mature: 5.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVSMKGMLERANKEHYAVMAINCFNLETARAVIDAAQELRAPIIIDLLQDHLTSHLGSR
CEECHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
FLTKPIIKMAEEASVEVAINLDHGHDVAIVKQCLADGFSSVMMDASSFPYEENVAITKKM
HHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
VEFAEVYHASVEAEVGNIGAVTGDNYTNQEMYTDPKVAIDFAKRTGIDALAISYGSSHGD
HHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHEEEHHHHCCCCEEEEEECCCCCC
YPEGFTPAFQFDIVREIKSATNMPLVLHGGSGCGAENIRESVRLGINKINVGSDFMKAQV
CCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCEECCCHHHHHHHH
NQIKTNLKENPAVNYVDLIHETIKAGTKAVKNYIQLSGSTGKSL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MYVSMKGMLERANKEHYAVMAINCFNLETARAVIDAAQELRAPIIIDLLQDHLTSHLGSR
CEECHHHHHHHCCCCCEEEEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
FLTKPIIKMAEEASVEVAINLDHGHDVAIVKQCLADGFSSVMMDASSFPYEENVAITKKM
HHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHH
VEFAEVYHASVEAEVGNIGAVTGDNYTNQEMYTDPKVAIDFAKRTGIDALAISYGSSHGD
HHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHEEEHHHHCCCCEEEEEECCCCCC
YPEGFTPAFQFDIVREIKSATNMPLVLHGGSGCGAENIRESVRLGINKINVGSDFMKAQV
CCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHCCCEECCCHHHHHHHH
NQIKTNLKENPAVNYVDLIHETIKAGTKAVKNYIQLSGSTGKSL
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA