Definition | Listeria monocytogenes Clip81459, complete genome. |
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Accession | NC_012488 |
Length | 2,912,690 |
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The map label for this gene is 226224689
Identifier: 226224689
GI number: 226224689
Start: 2160172
End: 2160798
Strand: Reverse
Name: 226224689
Synonym: Lm4b_02104
Alternate gene names: NA
Gene position: 2160798-2160172 (Counterclockwise)
Preceding gene: 226224690
Following gene: 226224688
Centisome position: 74.19
GC content: 42.58
Gene sequence:
>627_bases ATGACTGAAAAGAAAATTGATTTTAAAAAAGAAGAGAAGAAATTCTACGCGCCTAAAAGGAAGCCAGAGCGTATTTTTGT TCCGGAAATGAATTTTTTGATGGTGGATGGGAAAGGTGATCCGGACGGTGAGGCGTATCAAAAAGCAGTGCAGTCTCTTT ATGCGATTGCGTACACGATTAAAATGAGCAAGATGGGCGAGACGCGTCTGGATGGTTACACGGATTTTGTTGTACCGCCG CTGGAAGGTTTTTGGTGGTCTGAAGAGAGGTTTGATTTAAAGGATAGAGATGCGTGGCTTTGGACATCCATTCTTAGACA ACCGGACTTTGTCACCGAAGAAGTGTTGGAATGGGCGAAAGAGGTTGCTAAGAAGAAAAAGCCTGATCTTGATACGAGTC ACGTAAAATTGGTTCGTTTTGAAGAAGGAGAATGTGTGCAGATGATGCATATTGGTCCTTTTAGTGAAGAAGTGAAAACG GTCGCGGAAATGCACCAATTCATGGAAACAGAAGGACTTCATAATGATACAGGGGCTGTTCGTAAACACCATGAAATTTA TTTGAGTGATCCGCGTAAAGTGGACCCAGAAAAAATGAAGACCATCCTTCGACTTCCAGTGAGTTGA
Upstream 100 bases:
>100_bases GTAATTTTAAAAAGTTGATGGATTATGCAGCAAAGACGGTCGCTAGTCACGATAATTTTCAAAGGATAGTGCCGAATTGG ATGAACGAGGAGGAATTCAA
Downstream 100 bases:
>100_bases ATAATTGGAATGTTTTGCGTTATAGTATAGTAGAAATAGGACAAAGGCGACTGCCCGGAATACAAATATTTCAGGGTAGT TTTTTTGTGAAGTGGGGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MTEKKIDFKKEEKKFYAPKRKPERIFVPEMNFLMVDGKGDPDGEAYQKAVQSLYAIAYTIKMSKMGETRLDGYTDFVVPP LEGFWWSEERFDLKDRDAWLWTSILRQPDFVTEEVLEWAKEVAKKKKPDLDTSHVKLVRFEEGECVQMMHIGPFSEEVKT VAEMHQFMETEGLHNDTGAVRKHHEIYLSDPRKVDPEKMKTILRLPVS
Sequences:
>Translated_208_residues MTEKKIDFKKEEKKFYAPKRKPERIFVPEMNFLMVDGKGDPDGEAYQKAVQSLYAIAYTIKMSKMGETRLDGYTDFVVPP LEGFWWSEERFDLKDRDAWLWTSILRQPDFVTEEVLEWAKEVAKKKKPDLDTSHVKLVRFEEGECVQMMHIGPFSEEVKT VAEMHQFMETEGLHNDTGAVRKHHEIYLSDPRKVDPEKMKTILRLPVS >Mature_207_residues TEKKIDFKKEEKKFYAPKRKPERIFVPEMNFLMVDGKGDPDGEAYQKAVQSLYAIAYTIKMSKMGETRLDGYTDFVVPPL EGFWWSEERFDLKDRDAWLWTSILRQPDFVTEEVLEWAKEVAKKKKPDLDTSHVKLVRFEEGECVQMMHIGPFSEEVKTV AEMHQFMETEGLHNDTGAVRKHHEIYLSDPRKVDPEKMKTILRLPVS
Specific function: Unknown
COG id: COG4832
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24448; Mature: 24317
Theoretical pI: Translated: 5.99; Mature: 5.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEKKIDFKKEEKKFYAPKRKPERIFVPEMNFLMVDGKGDPDGEAYQKAVQSLYAIAYTI CCCCCCCCCHHHHHHCCCCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH KMSKMGETRLDGYTDFVVPPLEGFWWSEERFDLKDRDAWLWTSILRQPDFVTEEVLEWAK HHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH EVAKKKKPDLDTSHVKLVRFEEGECVQMMHIGPFSEEVKTVAEMHQFMETEGLHNDTGAV HHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHH RKHHEIYLSDPRKVDPEKMKTILRLPVS HHCCEEEECCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure TEKKIDFKKEEKKFYAPKRKPERIFVPEMNFLMVDGKGDPDGEAYQKAVQSLYAIAYTI CCCCCCCCHHHHHHCCCCCCCCEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH KMSKMGETRLDGYTDFVVPPLEGFWWSEERFDLKDRDAWLWTSILRQPDFVTEEVLEWAK HHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHH EVAKKKKPDLDTSHVKLVRFEEGECVQMMHIGPFSEEVKTVAEMHQFMETEGLHNDTGAV HHHHHCCCCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCHHH RKHHEIYLSDPRKVDPEKMKTILRLPVS HHCCEEEECCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA