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The map label for this gene is ycnI [H]

Identifier: 226224667

GI number: 226224667

Start: 2142115

End: 2142732

Strand: Reverse

Name: ycnI [H]

Synonym: Lm4b_02082

Alternate gene names: 226224667

Gene position: 2142732-2142115 (Counterclockwise)

Preceding gene: 226224668

Following gene: 226224666

Centisome position: 73.57

GC content: 42.07

Gene sequence:

>618_bases
ATGAAAAAAATTATCAGCTCCATCGTCGTTTTATTAGCTGTCTTTATCATTCCGTTTCAAGCGAGCGCACATGTTTCTGT
ATTACCGAGCGAATCGACCGTAGACTCCTGGGAAACCTACACAATGAAAGTACCGTCAGAAAAAGATGTCGCCTCTAAAA
AAATCGTTTTAAAAGTAGAAAAAGGCGTATCATTCGAATCTTATGAACCAGTGCCAGGCTGGACAACGACAGTAGATAAG
AAAAATGGCACAGTAACATGGCAAACAGAAGGCAACGGAATTGAAAAAGGCCAATTCCAGCGCTTTAGTTTTATCGCTAA
AAATCCAAGTGAAGAAGGCGAAATTGCTTGGAATGCCTATCAATATTATGAAGATGGCTCCATCGTTGAATGGGTTGGCG
CAGAAGATTCCGAGACACCACATGCTACCACAAAAATTGTCAAAGAGTCTTCCAAATCCGCAACTGGCTCGCACGGAGAA
GTAGTTGCGGGAGCGGAGAACACAGCAGGGGATACAAGCAGTACTGGAGATAATACGATTTTATTATGGACCGCAGTAGC
TATCAGCGTTATTGCACTTATCACGGGGATTCTTGCTATTTTAAGCCGAAAAAAATAA

Upstream 100 bases:

>100_bases
AACCGGCAAGTGGGAAATTACGGTTCATGGTTTAACAAAAGATTTCACAGATATAAATCAAACATTTACAACCAATATTA
CACAGTAAAGGGGAAAAATA

Downstream 100 bases:

>100_bases
CTTCAAAGGAGTAAGCAGATGGAACGGAAAATCATGCATTTAGCTGTAGGTAAGCCGAAAGAACTTAACCTTTCAAATAA
CAAACGGATGATGACGGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 205

Protein sequence:

>205_residues
MKKIISSIVVLLAVFIIPFQASAHVSVLPSESTVDSWETYTMKVPSEKDVASKKIVLKVEKGVSFESYEPVPGWTTTVDK
KNGTVTWQTEGNGIEKGQFQRFSFIAKNPSEEGEIAWNAYQYYEDGSIVEWVGAEDSETPHATTKIVKESSKSATGSHGE
VVAGAENTAGDTSSTGDNTILLWTAVAISVIALITGILAILSRKK

Sequences:

>Translated_205_residues
MKKIISSIVVLLAVFIIPFQASAHVSVLPSESTVDSWETYTMKVPSEKDVASKKIVLKVEKGVSFESYEPVPGWTTTVDK
KNGTVTWQTEGNGIEKGQFQRFSFIAKNPSEEGEIAWNAYQYYEDGSIVEWVGAEDSETPHATTKIVKESSKSATGSHGE
VVAGAENTAGDTSSTGDNTILLWTAVAISVIALITGILAILSRKK
>Mature_205_residues
MKKIISSIVVLLAVFIIPFQASAHVSVLPSESTVDSWETYTMKVPSEKDVASKKIVLKVEKGVSFESYEPVPGWTTTVDK
KNGTVTWQTEGNGIEKGQFQRFSFIAKNPSEEGEIAWNAYQYYEDGSIVEWVGAEDSETPHATTKIVKESSKSATGSHGE
VVAGAENTAGDTSSTGDNTILLWTAVAISVIALITGILAILSRKK

Specific function: Unknown

COG id: COG4549

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell membrane; Single-pass type I membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012533 [H]

Pfam domain/function: PF07987 DUF1775 [H]

EC number: NA

Molecular weight: Translated: 22146; Mature: 22146

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIISSIVVLLAVFIIPFQASAHVSVLPSESTVDSWETYTMKVPSEKDVASKKIVLKVE
CHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEEEE
KGVSFESYEPVPGWTTTVDKKNGTVTWQTEGNGIEKGQFQRFSFIAKNPSEEGEIAWNAY
CCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEEE
QYYEDGSIVEWVGAEDSETPHATTKIVKESSKSATGSHGEVVAGAENTAGDTSSTGDNTI
EEECCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCEE
LLWTAVAISVIALITGILAILSRKK
EHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKIISSIVVLLAVFIIPFQASAHVSVLPSESTVDSWETYTMKVPSEKDVASKKIVLKVE
CHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCCCCCCCCEEEEEEE
KGVSFESYEPVPGWTTTVDKKNGTVTWQTEGNGIEKGQFQRFSFIAKNPSEEGEIAWNAY
CCCCCCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCEEEEEECCCCCCCCEEEEEE
QYYEDGSIVEWVGAEDSETPHATTKIVKESSKSATGSHGEVVAGAENTAGDTSSTGDNTI
EEECCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCEE
LLWTAVAISVIALITGILAILSRKK
EHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]