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The map label for this gene is 226224631

Identifier: 226224631

GI number: 226224631

Start: 2105506

End: 2107044

Strand: Reverse

Name: 226224631

Synonym: Lm4b_02046

Alternate gene names: NA

Gene position: 2107044-2105506 (Counterclockwise)

Preceding gene: 226224632

Following gene: 226224630

Centisome position: 72.34

GC content: 33.2

Gene sequence:

>1539_bases
ATGAGAGAATATTTAGATTCAAAAAGCCAAAAAAAGGTAGCGCTTCTTGAGAAGATTTTTTATGCGGAAAATCATACAAG
TACACAAGAGGAACTATTAAATGATTTGAACATCACGTATCCAACCCTCATTTCTACGATTAAAACAATTAATTTTGATA
TTGAACGATTTGGATATAAAGCGTTTTCGATTGTTCACTCCGCGCCAAATTTGTCCTATACCTTAAAAATATCGGATAAT
TGTAGTATTCAACTCATTATCAACGCCTATATTAGAGAGTCACCCAAATTTCAAATTCTCGAAACTTTATTGCTGGCCTC
CTTCCCTAACTTACAAGTATTGGCAAACGAAGTACATGTTTCTTATTCTGGGATAAAGAAAGAAATAAAGGAATTGAATG
AAGAGCTAAGGGAACGGAACTTGTCTATTTCTACAGGAAGTCAGGTAGAAATAACGGGGGACGAATTTTCATTAAGAATA
TTCTATACCTTCCTCTTTTTAGTCGCATATAGTGGGGATCGTTGGCCCTTTTCTTTTGTTCAATATGATGAAATCACCGA
CATATTAGAGAGTTGCCCAAAAGAAATTTATAGAGCAAACTCGATAGATAAGGCGATGATGATTCATTATTATGTCGCTA
TGCATTTATTAAGAGATCGAATGAATTGTCAAATTGATACAACTAGGCAGTTTAAAGTGGCCCTATATAAGGCTTGCACC
GAGGAGTCTAAGAAATCAGAAAGTGCGTTCATTAAAAAGGTAGCGAAACAACTTCCTAATAGGAACTATAAAGAAATGAC
CTACACGACGCAAATTATACTGAGTACCATTGTTGCTTTCGGCAGTTATTCTTCCATTGAAAAAATGCCTTCCTTTTTCT
ACATGGATGAACAGTTAGAAGAAATGGGCTTCATGAAACTAGTTGATTTTGCCAGTGAACAAGTAAATGATAATCTCTCT
ATTCCATTTTCAGAGAAAGAGATGGAATTGCTCCGTTACTCCTTTGCGAGTATAAATTATAGATATTTCTTACTTGATAA
TTTAATCAATAAGTTCAATAATATTGTGCCAGGGTATACAGATCTTGATCGAAATATAAGAAAAATCCATAAAGTGAATC
ACCTAGAACCATTGATTAGTCAATTAGTAAATTTAAAAGAAATGGATTCATTAAAACCGTTTGAAGAAAGACTTGCTTCA
GATTATCTGATCATTTTGGATAAGCGGATTGATTTTTCTATACACACCTTGCCTATTAAAGTAACTATTTTATCGACCAT
ATCTAATGAAACAGCCGTATTTGATTTTATGAGGTATTTTTCTAGTTACTACAATCTGGAAATACTTAATCAGGTCGATT
CGGTGGTGGACTTATATATAAGTGATTTTTCCGTGTCTCCAGAAGTATTGACCTCTTTACGTATCAATCAGCCAATAATC
TATGTAAATACTAGATGGCTAGAATCTGATTATGTCAAAATTAATGATAATCTGGCGAAAATAGCGAGAAAAAAATTTAT
CGCTAATAAAAAAGATTAG

Upstream 100 bases:

>100_bases
CCTTAAGAGCCAATGGAGCGAATACGATGACTTAGAGGAATATCTTATTGCTGTTACCTGGATTTTACATAAAAAGTAAA
CATTGAAAGGAAGTGTTTTA

Downstream 100 bases:

>100_bases
GGAAACACTTGTTGGAATGGATATGGAAAATGTTTAAATGGAAAACCAAGGTCTTGTCCGAGTAATGATCGTTACTCGGA
TTTTTTTATTTCTATTTTTC

Product: transcription regulator (VirR)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 512; Mature: 512

Protein sequence:

>512_residues
MREYLDSKSQKKVALLEKIFYAENHTSTQEELLNDLNITYPTLISTIKTINFDIERFGYKAFSIVHSAPNLSYTLKISDN
CSIQLIINAYIRESPKFQILETLLLASFPNLQVLANEVHVSYSGIKKEIKELNEELRERNLSISTGSQVEITGDEFSLRI
FYTFLFLVAYSGDRWPFSFVQYDEITDILESCPKEIYRANSIDKAMMIHYYVAMHLLRDRMNCQIDTTRQFKVALYKACT
EESKKSESAFIKKVAKQLPNRNYKEMTYTTQIILSTIVAFGSYSSIEKMPSFFYMDEQLEEMGFMKLVDFASEQVNDNLS
IPFSEKEMELLRYSFASINYRYFLLDNLINKFNNIVPGYTDLDRNIRKIHKVNHLEPLISQLVNLKEMDSLKPFEERLAS
DYLIILDKRIDFSIHTLPIKVTILSTISNETAVFDFMRYFSSYYNLEILNQVDSVVDLYISDFSVSPEVLTSLRINQPII
YVNTRWLESDYVKINDNLAKIARKKFIANKKD

Sequences:

>Translated_512_residues
MREYLDSKSQKKVALLEKIFYAENHTSTQEELLNDLNITYPTLISTIKTINFDIERFGYKAFSIVHSAPNLSYTLKISDN
CSIQLIINAYIRESPKFQILETLLLASFPNLQVLANEVHVSYSGIKKEIKELNEELRERNLSISTGSQVEITGDEFSLRI
FYTFLFLVAYSGDRWPFSFVQYDEITDILESCPKEIYRANSIDKAMMIHYYVAMHLLRDRMNCQIDTTRQFKVALYKACT
EESKKSESAFIKKVAKQLPNRNYKEMTYTTQIILSTIVAFGSYSSIEKMPSFFYMDEQLEEMGFMKLVDFASEQVNDNLS
IPFSEKEMELLRYSFASINYRYFLLDNLINKFNNIVPGYTDLDRNIRKIHKVNHLEPLISQLVNLKEMDSLKPFEERLAS
DYLIILDKRIDFSIHTLPIKVTILSTISNETAVFDFMRYFSSYYNLEILNQVDSVVDLYISDFSVSPEVLTSLRINQPII
YVNTRWLESDYVKINDNLAKIARKKFIANKKD
>Mature_512_residues
MREYLDSKSQKKVALLEKIFYAENHTSTQEELLNDLNITYPTLISTIKTINFDIERFGYKAFSIVHSAPNLSYTLKISDN
CSIQLIINAYIRESPKFQILETLLLASFPNLQVLANEVHVSYSGIKKEIKELNEELRERNLSISTGSQVEITGDEFSLRI
FYTFLFLVAYSGDRWPFSFVQYDEITDILESCPKEIYRANSIDKAMMIHYYVAMHLLRDRMNCQIDTTRQFKVALYKACT
EESKKSESAFIKKVAKQLPNRNYKEMTYTTQIILSTIVAFGSYSSIEKMPSFFYMDEQLEEMGFMKLVDFASEQVNDNLS
IPFSEKEMELLRYSFASINYRYFLLDNLINKFNNIVPGYTDLDRNIRKIHKVNHLEPLISQLVNLKEMDSLKPFEERLAS
DYLIILDKRIDFSIHTLPIKVTILSTISNETAVFDFMRYFSSYYNLEILNQVDSVVDLYISDFSVSPEVLTSLRINQPII
YVNTRWLESDYVKINDNLAKIARKKFIANKKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 59821; Mature: 59821

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREYLDSKSQKKVALLEKIFYAENHTSTQEELLNDLNITYPTLISTIKTINFDIERFGYK
CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCHH
AFSIVHSAPNLSYTLKISDNCSIQLIINAYIRESPKFQILETLLLASFPNLQVLANEVHV
HHHHEECCCCCEEEEEECCCCEEEEEEEEHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHH
SYSGIKKEIKELNEELRERNLSISTGSQVEITGDEFSLRIFYTFLFLVAYSGDRWPFSFV
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEHHHHHHHHHHHHCCCCCCCCHHE
QYDEITDILESCPKEIYRANSIDKAMMIHYYVAMHLLRDRMNCQIDTTRQFKVALYKACT
EHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHH
EESKKSESAFIKKVAKQLPNRNYKEMTYTTQIILSTIVAFGSYSSIEKMPSFFYMDEQLE
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHH
EMGFMKLVDFASEQVNDNLSIPFSEKEMELLRYSFASINYRYFLLDNLINKFNNIVPGYT
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEEHHHHHHHHHHHCCCCCCH
DLDRNIRKIHKVNHLEPLISQLVNLKEMDSLKPFEERLASDYLIILDKRIDFSIHTLPIK
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHCCCEEEEEECCCCCEEEEEEEE
VTILSTISNETAVFDFMRYFSSYYNLEILNQVDSVVDLYISDFSVSPEVLTSLRINQPII
EEEEEHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEE
YVNTRWLESDYVKINDNLAKIARKKFIANKKD
EEEEEEECCCCEEECCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MREYLDSKSQKKVALLEKIFYAENHTSTQEELLNDLNITYPTLISTIKTINFDIERFGYK
CCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHCHH
AFSIVHSAPNLSYTLKISDNCSIQLIINAYIRESPKFQILETLLLASFPNLQVLANEVHV
HHHHEECCCCCEEEEEECCCCEEEEEEEEHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHH
SYSGIKKEIKELNEELRERNLSISTGSQVEITGDEFSLRIFYTFLFLVAYSGDRWPFSFV
HHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCEEHHHHHHHHHHHHCCCCCCCCHHE
QYDEITDILESCPKEIYRANSIDKAMMIHYYVAMHLLRDRMNCQIDTTRQFKVALYKACT
EHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHH
EESKKSESAFIKKVAKQLPNRNYKEMTYTTQIILSTIVAFGSYSSIEKMPSFFYMDEQLE
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHH
EMGFMKLVDFASEQVNDNLSIPFSEKEMELLRYSFASINYRYFLLDNLINKFNNIVPGYT
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCEEEHHHHHHHHHHHCCCCCCH
DLDRNIRKIHKVNHLEPLISQLVNLKEMDSLKPFEERLASDYLIILDKRIDFSIHTLPIK
HHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHHHCCCEEEEEECCCCCEEEEEEEE
VTILSTISNETAVFDFMRYFSSYYNLEILNQVDSVVDLYISDFSVSPEVLTSLRINQPII
EEEEEHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCEE
YVNTRWLESDYVKINDNLAKIARKKFIANKKD
EEEEEEECCCCEEECCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA