Definition | Listeria monocytogenes Clip81459, complete genome. |
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Accession | NC_012488 |
Length | 2,912,690 |
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The map label for this gene is 226224626
Identifier: 226224626
GI number: 226224626
Start: 2096243
End: 2096716
Strand: Reverse
Name: 226224626
Synonym: Lm4b_02041
Alternate gene names: NA
Gene position: 2096716-2096243 (Counterclockwise)
Preceding gene: 226224627
Following gene: 226224625
Centisome position: 71.99
GC content: 33.76
Gene sequence:
>474_bases ATGAAGAAGAAAAGAGTAGTGATCATATCCTTACTACTATTGTTAGTAAGTGTCATTGGAATCAGTAGTTATTTTCTATT CAAGGATAAAATAAATCTGTTGGATGTAGACCATTCTGCCGTTGATTGGAACGGGAAAAAACAGAAGGATACAAGTGGAG AAGAAAATACAATCGCCATTCCGGGTTTTGAAAAAGTAACGTTGTATGCAAATGAAACAACACAAGCAGTCAATTTCCAT AATCCGGAAATTAATGATTGTTACTTCAAAATATCGCTTATTCATCCGGATGGTTCGGTTCTATGGATATCCGATTTGAT TGAACCGGGAAAAGGTATGTATTCCATTGAATTAGAAAAAACGTTAGCGGTAGGCGAATATGAAAATGCAGTATTAAAAT ATGAATGTTTTTCTTTAAACGATCAGTCACCTTTAAACGGGTCTGAAATAAATTTAAAATTAGTTGTCGTCTAG
Upstream 100 bases:
>100_bases CAGGGAACGTTGTATTTTCGATTAAGTATGACTGATGTAAATTAGCCAGACTAGTGATCATGTCAAGGTCATTTGGTTAT GAATAAATTGGAGGTTACCT
Downstream 100 bases:
>100_bases ACAAAGGAGGAAATTTTTTATGAATAAATTAGTATTAAGTACGTTAAGTGTAGCAGCAATGGGTATGGTGTTTTTTAGCG GAGGGACAGCCTACGCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 157
Protein sequence:
>157_residues MKKKRVVIISLLLLLVSVIGISSYFLFKDKINLLDVDHSAVDWNGKKQKDTSGEENTIAIPGFEKVTLYANETTQAVNFH NPEINDCYFKISLIHPDGSVLWISDLIEPGKGMYSIELEKTLAVGEYENAVLKYECFSLNDQSPLNGSEINLKLVVV
Sequences:
>Translated_157_residues MKKKRVVIISLLLLLVSVIGISSYFLFKDKINLLDVDHSAVDWNGKKQKDTSGEENTIAIPGFEKVTLYANETTQAVNFH NPEINDCYFKISLIHPDGSVLWISDLIEPGKGMYSIELEKTLAVGEYENAVLKYECFSLNDQSPLNGSEINLKLVVV >Mature_157_residues MKKKRVVIISLLLLLVSVIGISSYFLFKDKINLLDVDHSAVDWNGKKQKDTSGEENTIAIPGFEKVTLYANETTQAVNFH NPEINDCYFKISLIHPDGSVLWISDLIEPGKGMYSIELEKTLAVGEYENAVLKYECFSLNDQSPLNGSEINLKLVVV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17594; Mature: 17594
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKRVVIISLLLLLVSVIGISSYFLFKDKINLLDVDHSAVDWNGKKQKDTSGEENTIAI CCCCEEHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCEECCCCCCCCCCCCCCCEEEE PGFEKVTLYANETTQAVNFHNPEINDCYFKISLIHPDGSVLWISDLIEPGKGMYSIELEK CCCEEEEEEECCCEEEEECCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCEEEEEEEE TLAVGEYENAVLKYECFSLNDQSPLNGSEINLKLVVV EEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEEEEC >Mature Secondary Structure MKKKRVVIISLLLLLVSVIGISSYFLFKDKINLLDVDHSAVDWNGKKQKDTSGEENTIAI CCCCEEHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCEECCCCCCCCCCCCCCCEEEE PGFEKVTLYANETTQAVNFHNPEINDCYFKISLIHPDGSVLWISDLIEPGKGMYSIELEK CCCEEEEEEECCCEEEEECCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCEEEEEEEE TLAVGEYENAVLKYECFSLNDQSPLNGSEINLKLVVV EEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA