Definition Listeria monocytogenes Clip81459, complete genome.
Accession NC_012488
Length 2,912,690

Click here to switch to the map view.

The map label for this gene is 226224626

Identifier: 226224626

GI number: 226224626

Start: 2096243

End: 2096716

Strand: Reverse

Name: 226224626

Synonym: Lm4b_02041

Alternate gene names: NA

Gene position: 2096716-2096243 (Counterclockwise)

Preceding gene: 226224627

Following gene: 226224625

Centisome position: 71.99

GC content: 33.76

Gene sequence:

>474_bases
ATGAAGAAGAAAAGAGTAGTGATCATATCCTTACTACTATTGTTAGTAAGTGTCATTGGAATCAGTAGTTATTTTCTATT
CAAGGATAAAATAAATCTGTTGGATGTAGACCATTCTGCCGTTGATTGGAACGGGAAAAAACAGAAGGATACAAGTGGAG
AAGAAAATACAATCGCCATTCCGGGTTTTGAAAAAGTAACGTTGTATGCAAATGAAACAACACAAGCAGTCAATTTCCAT
AATCCGGAAATTAATGATTGTTACTTCAAAATATCGCTTATTCATCCGGATGGTTCGGTTCTATGGATATCCGATTTGAT
TGAACCGGGAAAAGGTATGTATTCCATTGAATTAGAAAAAACGTTAGCGGTAGGCGAATATGAAAATGCAGTATTAAAAT
ATGAATGTTTTTCTTTAAACGATCAGTCACCTTTAAACGGGTCTGAAATAAATTTAAAATTAGTTGTCGTCTAG

Upstream 100 bases:

>100_bases
CAGGGAACGTTGTATTTTCGATTAAGTATGACTGATGTAAATTAGCCAGACTAGTGATCATGTCAAGGTCATTTGGTTAT
GAATAAATTGGAGGTTACCT

Downstream 100 bases:

>100_bases
ACAAAGGAGGAAATTTTTTATGAATAAATTAGTATTAAGTACGTTAAGTGTAGCAGCAATGGGTATGGTGTTTTTTAGCG
GAGGGACAGCCTACGCGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MKKKRVVIISLLLLLVSVIGISSYFLFKDKINLLDVDHSAVDWNGKKQKDTSGEENTIAIPGFEKVTLYANETTQAVNFH
NPEINDCYFKISLIHPDGSVLWISDLIEPGKGMYSIELEKTLAVGEYENAVLKYECFSLNDQSPLNGSEINLKLVVV

Sequences:

>Translated_157_residues
MKKKRVVIISLLLLLVSVIGISSYFLFKDKINLLDVDHSAVDWNGKKQKDTSGEENTIAIPGFEKVTLYANETTQAVNFH
NPEINDCYFKISLIHPDGSVLWISDLIEPGKGMYSIELEKTLAVGEYENAVLKYECFSLNDQSPLNGSEINLKLVVV
>Mature_157_residues
MKKKRVVIISLLLLLVSVIGISSYFLFKDKINLLDVDHSAVDWNGKKQKDTSGEENTIAIPGFEKVTLYANETTQAVNFH
NPEINDCYFKISLIHPDGSVLWISDLIEPGKGMYSIELEKTLAVGEYENAVLKYECFSLNDQSPLNGSEINLKLVVV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17594; Mature: 17594

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKKRVVIISLLLLLVSVIGISSYFLFKDKINLLDVDHSAVDWNGKKQKDTSGEENTIAI
CCCCEEHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCEECCCCCCCCCCCCCCCEEEE
PGFEKVTLYANETTQAVNFHNPEINDCYFKISLIHPDGSVLWISDLIEPGKGMYSIELEK
CCCEEEEEEECCCEEEEECCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCEEEEEEEE
TLAVGEYENAVLKYECFSLNDQSPLNGSEINLKLVVV
EEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MKKKRVVIISLLLLLVSVIGISSYFLFKDKINLLDVDHSAVDWNGKKQKDTSGEENTIAI
CCCCEEHHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCEECCCCCCCCCCCCCCCEEEE
PGFEKVTLYANETTQAVNFHNPEINDCYFKISLIHPDGSVLWISDLIEPGKGMYSIELEK
CCCEEEEEEECCCEEEEECCCCCCCCEEEEEEEECCCCCEEEEECCCCCCCCEEEEEEEE
TLAVGEYENAVLKYECFSLNDQSPLNGSEINLKLVVV
EEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA