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The map label for this gene is uidR [C]

Identifier: 226224567

GI number: 226224567

Start: 2030685

End: 2031305

Strand: Reverse

Name: uidR [C]

Synonym: Lm4b_01981

Alternate gene names: 226224567

Gene position: 2031305-2030685 (Counterclockwise)

Preceding gene: 226224568

Following gene: 226224564

Centisome position: 69.74

GC content: 39.13

Gene sequence:

>621_bases
ATGGATGAAAAACGATTAAAAATTTTAGAAGTAGCAATGGGAGAATTTACGGAAAAAGGATATCAGGCGGCTAGTACGAA
TAAAATTTGCGCAAAAGCTGGTGTTTCCAAAGGGCTGATTTTTCACTATTTTGGTTCTAAAGAAAAGCTTTATATTGCGG
CTGTTAGTTATGCGGTTGATTTTGCGACCAAGGAGGTTCGTTTGGAAGGGGAACATTGGGGAGACTTTGTCGAAATGGCG
ATTTGGTCAACGAAGATGAAACTGGATTTTAATCGCAAATATCCTGCTGTGTTTGGCTTAATTATGCAAGCTTATGGAAA
TCCGCCAGTTGCATTGAAAGATAAACTTGAGGGCTTTTTTGATAAGGCGATTGAGCGATCAGAGGCGCAAATGAATCAAG
TTTTAAGTGAAATGAAGTTGAAAAAAGATGTAAATATGGATGCAGCGCGTAAAGTGATGGCGGCTCTTTTTAAACATATT
ACGGAGATTAGTACAGTTTATTTGCAGAGCCATCCAAATGCGACGATGGAAGATTTTGTTCCGCTTGCGAAGGATTTTAC
GGAAATGATGCGAATTGTCGAATTTGGGATATGCGAAGAAAAAAAGGATTTGGGCGAGTGA

Upstream 100 bases:

>100_bases
AAGGGATTACAGGAACCAATGCACTGATTTCTTGTGGGGTAATTGTTGTGATGGTTGCTATGACATTTGTTCTTTATAAG
AAAAAGGATTTGAAAGTATA

Downstream 100 bases:

>100_bases
GCCCAAATCCTTTTTTTAACCAATAAAGCTTTCGTGATGCGTGCTAATCATCGCTTCATCTGCGGCAGTTGGTTCTAAAT
ATTTTTTCGCACTATTAATC

Product: transcription regulator (TetR family)

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; Transcription Regulator; Transcriptional Regulator; Regulatory Protein; Regulatory Protein TetR; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MDEKRLKILEVAMGEFTEKGYQAASTNKICAKAGVSKGLIFHYFGSKEKLYIAAVSYAVDFATKEVRLEGEHWGDFVEMA
IWSTKMKLDFNRKYPAVFGLIMQAYGNPPVALKDKLEGFFDKAIERSEAQMNQVLSEMKLKKDVNMDAARKVMAALFKHI
TEISTVYLQSHPNATMEDFVPLAKDFTEMMRIVEFGICEEKKDLGE

Sequences:

>Translated_206_residues
MDEKRLKILEVAMGEFTEKGYQAASTNKICAKAGVSKGLIFHYFGSKEKLYIAAVSYAVDFATKEVRLEGEHWGDFVEMA
IWSTKMKLDFNRKYPAVFGLIMQAYGNPPVALKDKLEGFFDKAIERSEAQMNQVLSEMKLKKDVNMDAARKVMAALFKHI
TEISTVYLQSHPNATMEDFVPLAKDFTEMMRIVEFGICEEKKDLGE
>Mature_206_residues
MDEKRLKILEVAMGEFTEKGYQAASTNKICAKAGVSKGLIFHYFGSKEKLYIAAVSYAVDFATKEVRLEGEHWGDFVEMA
IWSTKMKLDFNRKYPAVFGLIMQAYGNPPVALKDKLEGFFDKAIERSEAQMNQVLSEMKLKKDVNMDAARKVMAALFKHI
TEISTVYLQSHPNATMEDFVPLAKDFTEMMRIVEFGICEEKKDLGE

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23419; Mature: 23419

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.8 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEKRLKILEVAMGEFTEKGYQAASTNKICAKAGVSKGLIFHYFGSKEKLYIAAVSYAVD
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEECCCCEEEEEHHHHHHH
FATKEVRLEGEHWGDFVEMAIWSTKMKLDFNRKYPAVFGLIMQAYGNPPVALKDKLEGFF
HHHHHEEECCCHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
DKAIERSEAQMNQVLSEMKLKKDVNMDAARKVMAALFKHITEISTVYLQSHPNATMEDFV
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
PLAKDFTEMMRIVEFGICEEKKDLGE
HHHHHHHHHHHHHHHCCCCCHHHCCC
>Mature Secondary Structure
MDEKRLKILEVAMGEFTEKGYQAASTNKICAKAGVSKGLIFHYFGSKEKLYIAAVSYAVD
CCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEECCCCEEEEEHHHHHHH
FATKEVRLEGEHWGDFVEMAIWSTKMKLDFNRKYPAVFGLIMQAYGNPPVALKDKLEGFF
HHHHHEEECCCHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHH
DKAIERSEAQMNQVLSEMKLKKDVNMDAARKVMAALFKHITEISTVYLQSHPNATMEDFV
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
PLAKDFTEMMRIVEFGICEEKKDLGE
HHHHHHHHHHHHHHHCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA