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The map label for this gene is 226224493

Identifier: 226224493

GI number: 226224493

Start: 1950562

End: 1951107

Strand: Reverse

Name: 226224493

Synonym: Lm4b_01906

Alternate gene names: NA

Gene position: 1951107-1950562 (Counterclockwise)

Preceding gene: 226224494

Following gene: 226224492

Centisome position: 66.99

GC content: 37.91

Gene sequence:

>546_bases
GTGAAATCCATCGCAGTGACGGGGTATAAAAATTTTGAACTGGGAATTTTTAAAAAGGATGCAGATGAAGCGGTTTATAT
AAAAGAAACAATTAAACGGCATTTGCTTCCACTCGTGGAAGATGGGCTTGAATGGGTGATTATTTCTGGTCAGTTAGGAA
TTGAACTTTGGGCTGGCGATGTGGTTGCAGAATTAAAAGCAGACTATCCGATTAAACTAGCAATCCTTGAACCGTTTGAA
AAGCAAAGTGCTAACTGGAATGAAGCGAACCAATTATGGGCGAGCGAAGTACTAGAAAAAGCCGATTACCATGCTTTTAT
TACGAAGCGTCCTTATGAAAGTCCAGCGCAATTTGCGGCAAGAGATGGTTTTATTATTGATAATACGGATGGCGCATTAC
TTGTATATGATTTAGAAAAAGAAGGTTCGCCGAAATTCTTTTATGACCGAGCGATTCAAGCAAAAGAACAGTCTAATTAT
TATATAGACTGTATTGATTTTTATGCACTCCAAGAAGTTGTAGAGGATATGAACCAAACGTTTTAA

Upstream 100 bases:

>100_bases
ATGGAAAGTCTTTTTATAAACACTTCCTAGATCACTACCAATCTACCAAGTATACACTAACGAGAGTGAGAGATTTCTTA
AAAAGAAAAGAGGAATTGAT

Downstream 100 bases:

>100_bases
TATGGAAGTAAACAGTTATTTTCATAAAAAACACTCGAATAGATTGACAAATGGTGTGAGATTTGAAAAAATAAGGGTAA
GTATATGATTAGAACAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MKSIAVTGYKNFELGIFKKDADEAVYIKETIKRHLLPLVEDGLEWVIISGQLGIELWAGDVVAELKADYPIKLAILEPFE
KQSANWNEANQLWASEVLEKADYHAFITKRPYESPAQFAARDGFIIDNTDGALLVYDLEKEGSPKFFYDRAIQAKEQSNY
YIDCIDFYALQEVVEDMNQTF

Sequences:

>Translated_181_residues
MKSIAVTGYKNFELGIFKKDADEAVYIKETIKRHLLPLVEDGLEWVIISGQLGIELWAGDVVAELKADYPIKLAILEPFE
KQSANWNEANQLWASEVLEKADYHAFITKRPYESPAQFAARDGFIIDNTDGALLVYDLEKEGSPKFFYDRAIQAKEQSNY
YIDCIDFYALQEVVEDMNQTF
>Mature_181_residues
MKSIAVTGYKNFELGIFKKDADEAVYIKETIKRHLLPLVEDGLEWVIISGQLGIELWAGDVVAELKADYPIKLAILEPFE
KQSANWNEANQLWASEVLEKADYHAFITKRPYESPAQFAARDGFIIDNTDGALLVYDLEKEGSPKFFYDRAIQAKEQSNY
YIDCIDFYALQEVVEDMNQTF

Specific function: Unknown

COG id: COG4474

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0398 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010697 [H]

Pfam domain/function: PF06908 DUF1273 [H]

EC number: NA

Molecular weight: Translated: 20746; Mature: 20746

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSIAVTGYKNFELGIFKKDADEAVYIKETIKRHLLPLVEDGLEWVIISGQLGIELWAGD
CCCEEEECCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCH
VVAELKADYPIKLAILEPFEKQSANWNEANQLWASEVLEKADYHAFITKRPYESPAQFAA
HHHHHCCCCCEEEEEECCHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH
RDGFIIDNTDGALLVYDLEKEGSPKFFYDRAIQAKEQSNYYIDCIDFYALQEVVEDMNQT
CCCEEEECCCCEEEEEEECCCCCCCEEHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCC
F
C
>Mature Secondary Structure
MKSIAVTGYKNFELGIFKKDADEAVYIKETIKRHLLPLVEDGLEWVIISGQLGIELWAGD
CCCEEEECCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCH
VVAELKADYPIKLAILEPFEKQSANWNEANQLWASEVLEKADYHAFITKRPYESPAQFAA
HHHHHCCCCCEEEEEECCHHHCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHH
RDGFIIDNTDGALLVYDLEKEGSPKFFYDRAIQAKEQSNYYIDCIDFYALQEVVEDMNQT
CCCEEEECCCCEEEEEEECCCCCCCEEHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHCC
F
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]