| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is fhs [H]
Identifier: 226224480
GI number: 226224480
Start: 1938743
End: 1940425
Strand: Reverse
Name: fhs [H]
Synonym: Lm4b_01893
Alternate gene names: 226224480
Gene position: 1940425-1938743 (Counterclockwise)
Preceding gene: 226224481
Following gene: 226224479
Centisome position: 66.62
GC content: 41.71
Gene sequence:
>1683_bases ATGTCAAATAAAGTGAAATCAGATATTGAAATTGCATCAAAAGCAGAAATTCTACCAGTTACGACTATTGCGGAACATTT AGGACTAGACGCAGATGCACTCGAACTTTACGGAAAGTATAAAGCAAAGTTATCCTATGATACCATTCACTCGCTAAAAG ATAAAGAACCAGGAAAACTTGTTCTTGTTACGGCGATTAACCCAACGCCTGCTGGTGAAGGGAAATCGACAGTGACAGTT GGTCTTGGCGACGCACTGTCTAAAAAAGATAAGAAAACCGTTATTGCACTTCGCGAACCATCGCTCGGACCTACCATGGG TATTAAGGGCGGGGCAACAGGTGGCGGATACGCGCAGGTTATTCCAATGGAAGATATTAATTTACATTTTACTGGTGATT TCCACGCGATTACAGCAGCAAACAATGCTTTATCGGCATTTATTGATAACCATATGCAACAAGGGAATGACCTAGATATT GACGGCCGAAGAATCGTTTGGAAACGTGTGGTTGATTTGAACGACCGTGCACTTCGAAAAGTGGTTGTTGGTCTTGGAGG TCCTATTCAAGGGGTTCCACGTGAAGACGGTTTTGATATTACGGTTGCTTCTGAAATTATGGCGATCATTTGTTTAGCAA GTGATTTAAAAGATTTAAAGAAACGTTTAAGTGAAATCGTGATCGGTTATAACTATAAAAAAGAACCAATTACAGTTGGC GAAATGGGCTACGAAGGCGCTCTAACCTTACTATTAAAAGATGCTTTAAAACCTAATTTGGTGCAAACATTAGAACATAC ACCTGCCATCGTACACGGTGGACCTTTTGCTAATATTGCTCACGGATGTAATAGTGTTTCTGCGACAAGCACAGCACTTC GACTAGGTGAGTATGTAGTGACAGAGGCTGGATTTGGTGCAGACCTTGGTGCCGAGAAATTTTTAGATATTAAAGTTCCT GCCCTTGGAAAAGCGCCAGATTGCGTTGTTATTGTAGCAACGATTCGCGCACTGAAAATGCACGGTGGCGCTTTGAAAAC CGAGCTTAGCGAAGAAAATGTGGATGCGCTAGCTAAAGGTTTTACTAATTTACAAAAACATACGGAATCTATTCAAACAT TTGGTATTCCTTATGTTGTAGCCATTAATAAATTCATTACCGATTCTGACGCAGAAGTAGCGAAATTAGAAGCACTTTGC GAAGAACACGGCATTCCTTTCTCTCTGACAGAAGTTTGGGAAAAAGGCGGCGACGGTGGCCTTGAACTCGCGGATAAAGT CATTGCGGCTGTTGAAAGTGGAGAAGCGGACTACAAACGCATTTATGATGATGCGTGGTCGATAGAAGAAAAACTAGAAG CGATTGTGACGAAGGTTTACGGTGGTATTGGTGTGGAACTTTCCAGCAAGGCGCAGAAACAAATCGTTGAATTCAAAAAA TATGGTTGGGACCGCTATCCGATTTGTATGGCGAAAACCCAATATTCCTTATCGGATGACCCAACATTACTTGGACGCCC AACTGATTTTGTTATTCACATTCGCGAATTCATTCCAAAACTTGGTGCTGGTTTTGTCGTTGCTTTAACAGGCGATGTAA TGACGATGCCAGGTTTACCGAAAAAACCAGCGGCACTTAATATGGATGTCGATGAAAATGGGAATGCACAAGGTTTATTT TAA
Upstream 100 bases:
>100_bases AAATGGTGTTACATCGCTTGGTGTCGCGCTTTTTTGATGCACTAAAGAAGCCAAAACATCTTAATTCTTTGTTACAATAT ACATATTCGGAGGGGATATC
Downstream 100 bases:
>100_bases AAGTAAAAGTTCCAAAAGTGGAAGAGCCGCTTTTGGAACTTTTTTCATCTTAAGCAATTGCTATGTTCTATGTTTTCAGC TAGAATAGATAAGGACGAAC
Product: formate--tetrahydrofolate ligase
Products: NA
Alternate protein names: Formyltetrahydrofolate synthetase; FHS; FTHFS [H]
Number of amino acids: Translated: 560; Mature: 559
Protein sequence:
>560_residues MSNKVKSDIEIASKAEILPVTTIAEHLGLDADALELYGKYKAKLSYDTIHSLKDKEPGKLVLVTAINPTPAGEGKSTVTV GLGDALSKKDKKTVIALREPSLGPTMGIKGGATGGGYAQVIPMEDINLHFTGDFHAITAANNALSAFIDNHMQQGNDLDI DGRRIVWKRVVDLNDRALRKVVVGLGGPIQGVPREDGFDITVASEIMAIICLASDLKDLKKRLSEIVIGYNYKKEPITVG EMGYEGALTLLLKDALKPNLVQTLEHTPAIVHGGPFANIAHGCNSVSATSTALRLGEYVVTEAGFGADLGAEKFLDIKVP ALGKAPDCVVIVATIRALKMHGGALKTELSEENVDALAKGFTNLQKHTESIQTFGIPYVVAINKFITDSDAEVAKLEALC EEHGIPFSLTEVWEKGGDGGLELADKVIAAVESGEADYKRIYDDAWSIEEKLEAIVTKVYGGIGVELSSKAQKQIVEFKK YGWDRYPICMAKTQYSLSDDPTLLGRPTDFVIHIREFIPKLGAGFVVALTGDVMTMPGLPKKPAALNMDVDENGNAQGLF
Sequences:
>Translated_560_residues MSNKVKSDIEIASKAEILPVTTIAEHLGLDADALELYGKYKAKLSYDTIHSLKDKEPGKLVLVTAINPTPAGEGKSTVTV GLGDALSKKDKKTVIALREPSLGPTMGIKGGATGGGYAQVIPMEDINLHFTGDFHAITAANNALSAFIDNHMQQGNDLDI DGRRIVWKRVVDLNDRALRKVVVGLGGPIQGVPREDGFDITVASEIMAIICLASDLKDLKKRLSEIVIGYNYKKEPITVG EMGYEGALTLLLKDALKPNLVQTLEHTPAIVHGGPFANIAHGCNSVSATSTALRLGEYVVTEAGFGADLGAEKFLDIKVP ALGKAPDCVVIVATIRALKMHGGALKTELSEENVDALAKGFTNLQKHTESIQTFGIPYVVAINKFITDSDAEVAKLEALC EEHGIPFSLTEVWEKGGDGGLELADKVIAAVESGEADYKRIYDDAWSIEEKLEAIVTKVYGGIGVELSSKAQKQIVEFKK YGWDRYPICMAKTQYSLSDDPTLLGRPTDFVIHIREFIPKLGAGFVVALTGDVMTMPGLPKKPAALNMDVDENGNAQGLF >Mature_559_residues SNKVKSDIEIASKAEILPVTTIAEHLGLDADALELYGKYKAKLSYDTIHSLKDKEPGKLVLVTAINPTPAGEGKSTVTVG LGDALSKKDKKTVIALREPSLGPTMGIKGGATGGGYAQVIPMEDINLHFTGDFHAITAANNALSAFIDNHMQQGNDLDID GRRIVWKRVVDLNDRALRKVVVGLGGPIQGVPREDGFDITVASEIMAIICLASDLKDLKKRLSEIVIGYNYKKEPITVGE MGYEGALTLLLKDALKPNLVQTLEHTPAIVHGGPFANIAHGCNSVSATSTALRLGEYVVTEAGFGADLGAEKFLDIKVPA LGKAPDCVVIVATIRALKMHGGALKTELSEENVDALAKGFTNLQKHTESIQTFGIPYVVAINKFITDSDAEVAKLEALCE EHGIPFSLTEVWEKGGDGGLELADKVIAAVESGEADYKRIYDDAWSIEEKLEAIVTKVYGGIGVELSSKAQKQIVEFKKY GWDRYPICMAKTQYSLSDDPTLLGRPTDFVIHIREFIPKLGAGFVVALTGDVMTMPGLPKKPAALNMDVDENGNAQGLF
Specific function: Unknown
COG id: COG2759
COG function: function code F; Formyltetrahydrofolate synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the formate--tetrahydrofolate ligase family [H]
Homologues:
Organism=Homo sapiens, GI36796743, Length=622, Percent_Identity=45.016077170418, Blast_Score=457, Evalue=1e-128, Organism=Homo sapiens, GI222136639, Length=626, Percent_Identity=43.1309904153355, Blast_Score=454, Evalue=1e-127, Organism=Homo sapiens, GI310124614, Length=84, Percent_Identity=40.4761904761905, Blast_Score=69, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17568737, Length=614, Percent_Identity=42.671009771987, Blast_Score=441, Evalue=1e-124, Organism=Caenorhabditis elegans, GI17568739, Length=614, Percent_Identity=42.671009771987, Blast_Score=441, Evalue=1e-124, Organism=Saccharomyces cerevisiae, GI6319558, Length=637, Percent_Identity=45.0549450549451, Blast_Score=475, Evalue=1e-135, Organism=Saccharomyces cerevisiae, GI6321643, Length=626, Percent_Identity=43.2907348242812, Blast_Score=449, Evalue=1e-127, Organism=Drosophila melanogaster, GI24645718, Length=621, Percent_Identity=41.3848631239936, Blast_Score=447, Evalue=1e-125, Organism=Drosophila melanogaster, GI17137370, Length=621, Percent_Identity=41.3848631239936, Blast_Score=447, Evalue=1e-125, Organism=Drosophila melanogaster, GI62472483, Length=621, Percent_Identity=41.3848631239936, Blast_Score=447, Evalue=1e-125, Organism=Drosophila melanogaster, GI45551871, Length=621, Percent_Identity=41.3848631239936, Blast_Score=447, Evalue=1e-125,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000559 - InterPro: IPR020628 [H]
Pfam domain/function: PF01268 FTHFS [H]
EC number: =6.3.4.3 [H]
Molecular weight: Translated: 60127; Mature: 59996
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: PS00722 FTHFS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNKVKSDIEIASKAEILPVTTIAEHLGLDADALELYGKYKAKLSYDTIHSLKDKEPGKL CCCCCCCCHHHHCCCCEEEHHHHHHHHCCCHHHHHHHHHHHEEECHHHHHHHCCCCCCCE VLVTAINPTPAGEGKSTVTVGLGDALSKKDKKTVIALREPSLGPTMGIKGGATGGGYAQV EEEEEECCCCCCCCCCEEEEECCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEE IPMEDINLHFTGDFHAITAANNALSAFIDNHMQQGNDLDIDGRRIVWKRVVDLNDRALRK EEECCCEEEEECCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHCCCHHHHHH VVVGLGGPIQGVPREDGFDITVASEIMAIICLASDLKDLKKRLSEIVIGYNYKKEPITVG HHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEC EMGYEGALTLLLKDALKPNLVQTLEHTPAIVHGGPFANIAHGCNSVSATSTALRLGEYVV CCCCCHHHHHHHHHHCCCHHHHHHHCCCEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHE TEAGFGADLGAEKFLDIKVPALGKAPDCVVIVATIRALKMHGGALKTELSEENVDALAKG ECCCCCCCCCCCCEEEEECCCCCCCCCCEEEHHHHHHHHHCCCHHCCCCCCCHHHHHHHH FTNLQKHTESIQTFGIPYVVAINKFITDSDAEVAKLEALCEEHGIPFSLTEVWEKGGDGG HHHHHHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHHHCCCCEEHHHHHHCCCCCC LELADKVIAAVESGEADYKRIYDDAWSIEEKLEAIVTKVYGGIGVELSSKAQKQIVEFKK HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHH YGWDRYPICMAKTQYSLSDDPTLLGRPTDFVIHIREFIPKLGAGFVVALTGDVMTMPGLP CCCCCCCEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCEEEEEECCEEECCCCC KKPAALNMDVDENGNAQGLF CCCCEEECCCCCCCCCCCCC >Mature Secondary Structure SNKVKSDIEIASKAEILPVTTIAEHLGLDADALELYGKYKAKLSYDTIHSLKDKEPGKL CCCCCCCHHHHCCCCEEEHHHHHHHHCCCHHHHHHHHHHHEEECHHHHHHHCCCCCCCE VLVTAINPTPAGEGKSTVTVGLGDALSKKDKKTVIALREPSLGPTMGIKGGATGGGYAQV EEEEEECCCCCCCCCCEEEEECCHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEE IPMEDINLHFTGDFHAITAANNALSAFIDNHMQQGNDLDIDGRRIVWKRVVDLNDRALRK EEECCCEEEEECCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEEHHHHCCCHHHHHH VVVGLGGPIQGVPREDGFDITVASEIMAIICLASDLKDLKKRLSEIVIGYNYKKEPITVG HHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCEEEC EMGYEGALTLLLKDALKPNLVQTLEHTPAIVHGGPFANIAHGCNSVSATSTALRLGEYVV CCCCCHHHHHHHHHHCCCHHHHHHHCCCEEEECCCHHHHHHCCCCCHHHHHHHHHHHHHE TEAGFGADLGAEKFLDIKVPALGKAPDCVVIVATIRALKMHGGALKTELSEENVDALAKG ECCCCCCCCCCCCEEEEECCCCCCCCCCEEEHHHHHHHHHCCCHHCCCCCCCHHHHHHHH FTNLQKHTESIQTFGIPYVVAINKFITDSDAEVAKLEALCEEHGIPFSLTEVWEKGGDGG HHHHHHHHHHHHHCCCCEEEEEHHHHCCCCHHHHHHHHHHHHCCCCEEHHHHHHCCCCCC LELADKVIAAVESGEADYKRIYDDAWSIEEKLEAIVTKVYGGIGVELSSKAQKQIVEFKK HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHH YGWDRYPICMAKTQYSLSDDPTLLGRPTDFVIHIREFIPKLGAGFVVALTGDVMTMPGLP CCCCCCCEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCEEEEEECCEEECCCCC KKPAALNMDVDENGNAQGLF CCCCEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11679669 [H]