Definition | Listeria monocytogenes Clip81459, complete genome. |
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Accession | NC_012488 |
Length | 2,912,690 |
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The map label for this gene is yieG [C]
Identifier: 226224448
GI number: 226224448
Start: 1907237
End: 1908520
Strand: Reverse
Name: yieG [C]
Synonym: Lm4b_01861
Alternate gene names: 226224448
Gene position: 1908520-1907237 (Counterclockwise)
Preceding gene: 226224450
Following gene: 226224447
Centisome position: 65.52
GC content: 41.43
Gene sequence:
>1284_bases ATGCAGAAATTTTTCAACAAAGTATTTCGGCTGAACGAGCATAAAACCAATTTCCGGACCGAATTTTTGGCTGGTATGAT TGGCTTTTTTACGGTGGCATATATTATTGTCGTCAATAGCTCGATTTTAGCGGAGGCTGGAGTTCCTTATCAAGGAGCAG TCCTTGCGACGATTTTTATTTCGGCGTTAGGTTGTTTGATTATGGGATTTTGGGCAAATGCACCGCTTATTCTAATGCCT GGGATGGGGATTAATGCGCTGTTTGCGTATACCCTTGTTCAAGGAATGGGACTAAGTTGGCAGGTTGCACTCGCTGCTGT TACGATGAGTGGCTTACTATTTATGATTCTTGCGTTTACACCACTTGCAGGAAAACTAAATGAAGCTATTCCCCTAATTT TAAAACAAGCGATTACGGTTGGGTTAGGTTTATTCTTAATCTTCCTAGGGCTTGAGAAGGGCGGAATCGTCACGCGCGGG AAACATGCTATTATTGCCGTTGGAGATTTAGGCGATCCATTCGTATTAGCAACACTTGTAACACTACTATTAACGATGAT TCTAGTTATTCGAAAAATTCCAGGCGCTTTCTTATGGAGTTTAATAATCGGGACAGTCGTTGGTGTGATGTTTGGTGTTG CCGGGAAAGCTGGAGGTGCTTCGATAAGCGTTGCACCGTGGAGTGATGTACTCTTTAAAGCTGATTTTTCCGGAATGGCG AGCGTTGGTTTTTGGAGTGCCGTCTTTACGATGACGATGGTTATTGTGTTTGAAACAGTTGGACTTACCAATGGACAAGT AAGGCAACTGAAGCAAACCGAAAAATTACCACGCATTTTAAAAGCTAGCTCACTGACAGCCTTTTTATCTGGCTTATTTG GTACAAGCCCAACGATCTCTGCACTTGAAAGTGGCTCGATGTTTGCGAGTGGAGCAAAAACTGGTTTAGCAACAATAACA ACTGGTCTGTTCTTTATCGCATCCCTTTTCTTAATGCCGGTATTATCTTTTATTCCGAACAGTGCGATTGCGCCGATTTT AATTATTATCGGTATGTCGATGCTGCAAGAATTTAAAGAAATGGATTTATCGAATGCGGCAGAAACTTTTTCAGCACTAC TGATTATTGTGTTAATCCCGCTGACGTATAGTATTGCAGACGGAATTGCAGCTGGTTTCATTGCGTATCCAATCCTTCGT GCTTTCACGAAAAATGAGGAACGTACTTCACCAGTCATGTATGTAATTGCAGCTTTATTTTTGCTTCAATTTATCATACA ATAA
Upstream 100 bases:
>100_bases TTCCTTTCGTATATGTACTATCTTTGTTATAATAAAGTTCTGTGGCAGGGGCAATACTCTGCGGGTTGGGAGAGGGACAA TTTCATAATGAGGAAAAAGT
Downstream 100 bases:
>100_bases CAAAGAAGTGATGCGCTCTTCTTATTTTTAAAGGGGAGCGCGTACTTTTTATCTAACTGATGTGAAAAGAGGGTTCGGAA AATGTACTATTATCTAATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MQKFFNKVFRLNEHKTNFRTEFLAGMIGFFTVAYIIVVNSSILAEAGVPYQGAVLATIFISALGCLIMGFWANAPLILMP GMGINALFAYTLVQGMGLSWQVALAAVTMSGLLFMILAFTPLAGKLNEAIPLILKQAITVGLGLFLIFLGLEKGGIVTRG KHAIIAVGDLGDPFVLATLVTLLLTMILVIRKIPGAFLWSLIIGTVVGVMFGVAGKAGGASISVAPWSDVLFKADFSGMA SVGFWSAVFTMTMVIVFETVGLTNGQVRQLKQTEKLPRILKASSLTAFLSGLFGTSPTISALESGSMFASGAKTGLATIT TGLFFIASLFLMPVLSFIPNSAIAPILIIIGMSMLQEFKEMDLSNAAETFSALLIIVLIPLTYSIADGIAAGFIAYPILR AFTKNEERTSPVMYVIAALFLLQFIIQ
Sequences:
>Translated_427_residues MQKFFNKVFRLNEHKTNFRTEFLAGMIGFFTVAYIIVVNSSILAEAGVPYQGAVLATIFISALGCLIMGFWANAPLILMP GMGINALFAYTLVQGMGLSWQVALAAVTMSGLLFMILAFTPLAGKLNEAIPLILKQAITVGLGLFLIFLGLEKGGIVTRG KHAIIAVGDLGDPFVLATLVTLLLTMILVIRKIPGAFLWSLIIGTVVGVMFGVAGKAGGASISVAPWSDVLFKADFSGMA SVGFWSAVFTMTMVIVFETVGLTNGQVRQLKQTEKLPRILKASSLTAFLSGLFGTSPTISALESGSMFASGAKTGLATIT TGLFFIASLFLMPVLSFIPNSAIAPILIIIGMSMLQEFKEMDLSNAAETFSALLIIVLIPLTYSIADGIAAGFIAYPILR AFTKNEERTSPVMYVIAALFLLQFIIQ >Mature_427_residues MQKFFNKVFRLNEHKTNFRTEFLAGMIGFFTVAYIIVVNSSILAEAGVPYQGAVLATIFISALGCLIMGFWANAPLILMP GMGINALFAYTLVQGMGLSWQVALAAVTMSGLLFMILAFTPLAGKLNEAIPLILKQAITVGLGLFLIFLGLEKGGIVTRG KHAIIAVGDLGDPFVLATLVTLLLTMILVIRKIPGAFLWSLIIGTVVGVMFGVAGKAGGASISVAPWSDVLFKADFSGMA SVGFWSAVFTMTMVIVFETVGLTNGQVRQLKQTEKLPRILKASSLTAFLSGLFGTSPTISALESGSMFASGAKTGLATIT TGLFFIASLFLMPVLSFIPNSAIAPILIIIGMSMLQEFKEMDLSNAAETFSALLIIVLIPLTYSIADGIAAGFIAYPILR AFTKNEERTSPVMYVIAALFLLQFIIQ
Specific function: Unknown
COG id: COG2252
COG function: function code R; Permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the xanthine/uracil permease family. AzgA purine transporter (TC 2.A.1.40) subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790150, Length=432, Percent_Identity=31.9444444444444, Blast_Score=211, Evalue=8e-56, Organism=Escherichia coli, GI87082309, Length=427, Percent_Identity=30.6791569086651, Blast_Score=206, Evalue=2e-54, Organism=Escherichia coli, GI1790499, Length=428, Percent_Identity=29.2056074766355, Blast_Score=159, Evalue=4e-40, Organism=Escherichia coli, GI48994909, Length=419, Percent_Identity=27.6849642004773, Blast_Score=149, Evalue=2e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006043 [H]
Pfam domain/function: PF00860 Xan_ur_permease [H]
EC number: NA
Molecular weight: Translated: 45517; Mature: 45517
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKFFNKVFRLNEHKTNFRTEFLAGMIGFFTVAYIIVVNSSILAEAGVPYQGAVLATIFI CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHH SALGCLIMGFWANAPLILMPGMGINALFAYTLVQGMGLSWQVALAAVTMSGLLFMILAFT HHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC PLAGKLNEAIPLILKQAITVGLGLFLIFLGLEKGGIVTRGKHAIIAVGDLGDPFVLATLV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEEEECCCCCHHHHHHHH TLLLTMILVIRKIPGAFLWSLIIGTVVGVMFGVAGKAGGASISVAPWSDVLFKADFSGMA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHCCCCCHH SVGFWSAVFTMTMVIVFETVGLTNGQVRQLKQTEKLPRILKASSLTAFLSGLFGTSPTIS HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH ALESGSMFASGAKTGLATITTGLFFIASLFLMPVLSFIPNSAIAPILIIIGMSMLQEFKE HHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH MDLSNAAETFSALLIIVLIPLTYSIADGIAAGFIAYPILRAFTKNEERTSPVMYVIAALF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LLQFIIQ HHHHHHC >Mature Secondary Structure MQKFFNKVFRLNEHKTNFRTEFLAGMIGFFTVAYIIVVNSSILAEAGVPYQGAVLATIFI CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHH SALGCLIMGFWANAPLILMPGMGINALFAYTLVQGMGLSWQVALAAVTMSGLLFMILAFT HHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC PLAGKLNEAIPLILKQAITVGLGLFLIFLGLEKGGIVTRGKHAIIAVGDLGDPFVLATLV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCEEEEEECCCCCHHHHHHHH TLLLTMILVIRKIPGAFLWSLIIGTVVGVMFGVAGKAGGASISVAPWSDVLFKADFSGMA HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHCCCCCHH SVGFWSAVFTMTMVIVFETVGLTNGQVRQLKQTEKLPRILKASSLTAFLSGLFGTSPTIS HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH ALESGSMFASGAKTGLATITTGLFFIASLFLMPVLSFIPNSAIAPILIIIGMSMLQEFKE HHHCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH MDLSNAAETFSALLIIVLIPLTYSIADGIAAGFIAYPILRAFTKNEERTSPVMYVIAALF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH LLQFIIQ HHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]