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The map label for this gene is stp [H]

Identifier: 226224424

GI number: 226224424

Start: 1881717

End: 1882475

Strand: Reverse

Name: stp [H]

Synonym: Lm4b_01837

Alternate gene names: 226224424

Gene position: 1882475-1881717 (Counterclockwise)

Preceding gene: 226224425

Following gene: 226224423

Centisome position: 64.63

GC content: 39.92

Gene sequence:

>759_bases
ATGCATGCAGAATTTAGAACAGATAGAGGCAGAATAAGACATCATAATGAAGACAACGGCGGGGTTTTTGAAAATAAAGA
TAACCAGCCGATTGTCATTGTTGCAGACGGCATGGGTGGTCACCGGGCAGGAGACGTGGCAAGCGAAATGGCTGTGCGTC
TACTAAGCGATGCATGGAAAGAAACGACCGCACTTTTGACCGCAGAAGAAATTGAAACTTGGCTACAAAAAACAATTCAA
GAAGTCAATAAAGAAATTGTTCTTTATTCGGAAAGTGAAATGGATTTAAATGGTATGGGAACAACACTTGTTGCAGCAAT
TATGGCGCAGTCACAAGTCGTTATTGCCAACGTAGGAGATAGCAGAGGTTATTTACTTCAAAATCATGTCTTACGTCAAC
TAACCGAAGATCATTCACTAGTACATGAACTCCTTCGAACAGGCGAAATCAGCAAAGAAGATGCCATGAATCATCCGCGG
AAAAATATTCTTTTACGCGCACTTGGTGTAGAAGGAAAAGTAGAAGTGGACACATTTGTTGTCCCTTTTCAAACGAGCGA
TACGTTACTACTTTGTTCCGATGGTTTAACGAATATGGTTCCAGAAACAGAAATGGAAGAAATTTTAAAAAGTAAAAGAA
CTCTTTCTGAAAAAGCAGATGTATTTATTACAAAAGCTAATTCTTATGGGGGAGAAGATAATATAACTGTGCTGTTAGTC
GAACGAGATCTGACGCAGAAAGGGAGGGATGCTTCATGA

Upstream 100 bases:

>100_bases
GATTTTATTCAACTTTTACCAACAGATATTGGAAGCGATGGTTTCTTCGTTTCTAGCCTTAGAAAAGTAAAGTCCTGAAA
AATAGTGAGGTGCTTTTAAA

Downstream 100 bases:

>100_bases
TGATTGGTAAGCGATTAAGTGATCGATATAAAATTTTACATGCAATAGGCGGCGGCGGAATGGCCAATGTGTATTTGGCG
CATGATATTATTCTTGATAG

Product: phosphoprotein phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MHAEFRTDRGRIRHHNEDNGGVFENKDNQPIVIVADGMGGHRAGDVASEMAVRLLSDAWKETTALLTAEEIETWLQKTIQ
EVNKEIVLYSESEMDLNGMGTTLVAAIMAQSQVVIANVGDSRGYLLQNHVLRQLTEDHSLVHELLRTGEISKEDAMNHPR
KNILLRALGVEGKVEVDTFVVPFQTSDTLLLCSDGLTNMVPETEMEEILKSKRTLSEKADVFITKANSYGGEDNITVLLV
ERDLTQKGRDAS

Sequences:

>Translated_252_residues
MHAEFRTDRGRIRHHNEDNGGVFENKDNQPIVIVADGMGGHRAGDVASEMAVRLLSDAWKETTALLTAEEIETWLQKTIQ
EVNKEIVLYSESEMDLNGMGTTLVAAIMAQSQVVIANVGDSRGYLLQNHVLRQLTEDHSLVHELLRTGEISKEDAMNHPR
KNILLRALGVEGKVEVDTFVVPFQTSDTLLLCSDGLTNMVPETEMEEILKSKRTLSEKADVFITKANSYGGEDNITVLLV
ERDLTQKGRDAS
>Mature_252_residues
MHAEFRTDRGRIRHHNEDNGGVFENKDNQPIVIVADGMGGHRAGDVASEMAVRLLSDAWKETTALLTAEEIETWLQKTIQ
EVNKEIVLYSESEMDLNGMGTTLVAAIMAQSQVVIANVGDSRGYLLQNHVLRQLTEDHSLVHELLRTGEISKEDAMNHPR
KNILLRALGVEGKVEVDTFVVPFQTSDTLLLCSDGLTNMVPETEMEEILKSKRTLSEKADVFITKANSYGGEDNITVLLV
ERDLTQKGRDAS

Specific function: Protein phosphatase that dephosphorylates EF-Tu [H]

COG id: COG0631

COG function: function code T; Serine/threonine protein phosphatase

Gene ontology:

Cell location: Cytoplasm. Membrane; Peripheral membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PP2C-like domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17553792, Length=260, Percent_Identity=27.3076923076923, Blast_Score=72, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015655
- InterPro:   IPR001932
- InterPro:   IPR014045 [H]

Pfam domain/function: PF00481 PP2C [H]

EC number: =3.1.3.16 [H]

Molecular weight: Translated: 28014; Mature: 28014

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAEFRTDRGRIRHHNEDNGGVFENKDNQPIVIVADGMGGHRAGDVASEMAVRLLSDAWK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
ETTALLTAEEIETWLQKTIQEVNKEIVLYSESEMDLNGMGTTLVAAIMAQSQVVIANVGD
HHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCC
SRGYLLQNHVLRQLTEDHSLVHELLRTGEISKEDAMNHPRKNILLRALGVEGKVEVDTFV
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHEEEEECCCCEEEEEEEE
VPFQTSDTLLLCSDGLTNMVPETEMEEILKSKRTLSEKADVFITKANSYGGEDNITVLLV
EEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEE
ERDLTQKGRDAS
ECCCCCCCCCCC
>Mature Secondary Structure
MHAEFRTDRGRIRHHNEDNGGVFENKDNQPIVIVADGMGGHRAGDVASEMAVRLLSDAWK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
ETTALLTAEEIETWLQKTIQEVNKEIVLYSESEMDLNGMGTTLVAAIMAQSQVVIANVGD
HHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCC
SRGYLLQNHVLRQLTEDHSLVHELLRTGEISKEDAMNHPRKNILLRALGVEGKVEVDTFV
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHEEEEECCCCEEEEEEEE
VPFQTSDTLLLCSDGLTNMVPETEMEEILKSKRTLSEKADVFITKANSYGGEDNITVLLV
EEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEE
ERDLTQKGRDAS
ECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]