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The map label for this gene is 226224405

Identifier: 226224405

GI number: 226224405

Start: 1861382

End: 1861714

Strand: Reverse

Name: 226224405

Synonym: Lm4b_01818

Alternate gene names: NA

Gene position: 1861714-1861382 (Counterclockwise)

Preceding gene: 226224406

Following gene: 226224404

Centisome position: 63.92

GC content: 31.23

Gene sequence:

>333_bases
TTGTTTGAGAAGACAAACCGTATGAATTTATTATTTGATTTTTACCAGGAATTACTAACAACAAAACAAAAAGCCTATGT
TTCTTTTTATTATCTAGATGATTACTCGCTAGGCGAAATTGCTGAAGAATTTGAAGTGAGTAGACAAGCCATTTATGATA
ATATTAAAAGAACCGAAGAAAGCCTAGAAAAATACGAAGAAAAACTAGGGATGCTAAAAAAATACCAACAACGAGAAAAA
CTTTTTAGTCAATTAGAAGCACAATTAACCAAGAAGAATTTTCTGGACGAGCAAGTGAAAGATACGCTCGAACAGCTTAA
AAATATCGATTAG

Upstream 100 bases:

>100_bases
GAATGATTCTCGTCATTCTGGCTTTTTTCTCTTTTGTTTAACCTTCCTTGACATTCCCGCGATTTCCCCGTATCCTTTAA
AAGGAGAGAGGTGAAATGCC

Downstream 100 bases:

>100_bases
GAGGCCAGAATCATGGCATTTGAAGGACTAGCTGGAAGACTCCAAGAAACAATGAACAAAATTCGCGGCAAAGGGAAAGT
AAACGAAGCTGACGTAAAAG

Product: putative DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MFEKTNRMNLLFDFYQELLTTKQKAYVSFYYLDDYSLGEIAEEFEVSRQAIYDNIKRTEESLEKYEEKLGMLKKYQQREK
LFSQLEAQLTKKNFLDEQVKDTLEQLKNID

Sequences:

>Translated_110_residues
MFEKTNRMNLLFDFYQELLTTKQKAYVSFYYLDDYSLGEIAEEFEVSRQAIYDNIKRTEESLEKYEEKLGMLKKYQQREK
LFSQLEAQLTKKNFLDEQVKDTLEQLKNID
>Mature_110_residues
MFEKTNRMNLLFDFYQELLTTKQKAYVSFYYLDDYSLGEIAEEFEVSRQAIYDNIKRTEESLEKYEEKLGMLKKYQQREK
LFSQLEAQLTKKNFLDEQVKDTLEQLKNID

Specific function: Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein [H]

COG id: COG2739

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0122 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013324
- InterPro:   IPR007394
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04297 UPF0122 [H]

EC number: NA

Molecular weight: Translated: 13392; Mature: 13392

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEKTNRMNLLFDFYQELLTTKQKAYVSFYYLDDYSLGEIAEEFEVSRQAIYDNIKRTEE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
SLEKYEEKLGMLKKYQQREKLFSQLEAQLTKKNFLDEQVKDTLEQLKNID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFEKTNRMNLLFDFYQELLTTKQKAYVSFYYLDDYSLGEIAEEFEVSRQAIYDNIKRTEE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
SLEKYEEKLGMLKKYQQREKLFSQLEAQLTKKNFLDEQVKDTLEQLKNID
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]