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The map label for this gene is 226224403

Identifier: 226224403

GI number: 226224403

Start: 1858978

End: 1859874

Strand: Reverse

Name: 226224403

Synonym: Lm4b_01816

Alternate gene names: NA

Gene position: 1859874-1858978 (Counterclockwise)

Preceding gene: 226224404

Following gene: 226224402

Centisome position: 63.85

GC content: 38.35

Gene sequence:

>897_bases
ATGAAACATTGGGTAAAAGTAACAGGGGCAGGGGTGCTAAGCGCGACTTTACTATTAGGAGGATGCGGAGCGCAGTCAGA
AGAAAAAGCGGAGGCAAACGTTAAAACCGAGCAAACAGTCAAACCAGGAAGCCAAATTAAATTAGAAGGTGCTGTAAATG
TCCGGGACTTAGGCGGATACAAAACAACGGATGGACTAACTATCAAGCCACATAAACTCATTAGAAGTGCCGAACTCGCT
AACTTAAGTGATTCGGATAAAAAGAAACTCGTAAATACATACGATTTGTCTCATATAGTTGATTTCCGAACAAGTTCAGA
AGTCGCAGCCAAACCAGACCCAAAACTCACAGATGTTGACTATACGCACGATTCTGTTATGAAAGATAATGGTGCATCTA
CAAGCACACAAGATTTAACTGCCAGCCTAGCCAAAATGGATAATCCAGAAACATTTCTCATTAATGCCAATAAGAGCTTT
ATTACAGATGAAACTTCGATACAAGCCTATAAAGATTTTTTTGATATACTATTAGCAAACCAAGATGGATCTGTTCTTTG
GCACTGTACAGCTGGAAAAGATCGTGCTGGATTTGGAACCGCCCTCGTTCTGTCAGCATTAGGAGTGGATAAAAACACAG
TCATTAACGATTATATGCTTTCCAATAAATATCGTGCCCTCGAAAATAAAAAAGCAATTGAAGCCGTTGCAGCAAAAACA
GATAATAAAAAAGTGATTGATGGAATGACAGCCGTAATGGAAGTTCGTGAATCTTATATCAATGCAGCCTTTGATGAAAT
TGATGCAAAATATGGTTCGATGGACAACTTTTTAAAAGAAAAACTCGGACTAACCGATGCTAAAAAAGAACAACTAAAAA
AAGCCTATCTTTATTAA

Upstream 100 bases:

>100_bases
TACCTTAACATCCCTAAAATCATTTCTTTACAAACCCTTCATTCAACCAACAAATTGCGTTGCTATAAAGTACAAGAAGC
TTACAAAAGGAGGAGAAAGA

Downstream 100 bases:

>100_bases
AAAAGTAAGCCCTTGAAAAAGGGCTTTTTTTTTGCGTACAAATAGAATCTGAAGTGAAGAACCATTTTAAAAAGATTTGT
ATACAATTGAAAGACAATTC

Product: protein-tyrosine phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MKHWVKVTGAGVLSATLLLGGCGAQSEEKAEANVKTEQTVKPGSQIKLEGAVNVRDLGGYKTTDGLTIKPHKLIRSAELA
NLSDSDKKKLVNTYDLSHIVDFRTSSEVAAKPDPKLTDVDYTHDSVMKDNGASTSTQDLTASLAKMDNPETFLINANKSF
ITDETSIQAYKDFFDILLANQDGSVLWHCTAGKDRAGFGTALVLSALGVDKNTVINDYMLSNKYRALENKKAIEAVAAKT
DNKKVIDGMTAVMEVRESYINAAFDEIDAKYGSMDNFLKEKLGLTDAKKEQLKKAYLY

Sequences:

>Translated_298_residues
MKHWVKVTGAGVLSATLLLGGCGAQSEEKAEANVKTEQTVKPGSQIKLEGAVNVRDLGGYKTTDGLTIKPHKLIRSAELA
NLSDSDKKKLVNTYDLSHIVDFRTSSEVAAKPDPKLTDVDYTHDSVMKDNGASTSTQDLTASLAKMDNPETFLINANKSF
ITDETSIQAYKDFFDILLANQDGSVLWHCTAGKDRAGFGTALVLSALGVDKNTVINDYMLSNKYRALENKKAIEAVAAKT
DNKKVIDGMTAVMEVRESYINAAFDEIDAKYGSMDNFLKEKLGLTDAKKEQLKKAYLY
>Mature_298_residues
MKHWVKVTGAGVLSATLLLGGCGAQSEEKAEANVKTEQTVKPGSQIKLEGAVNVRDLGGYKTTDGLTIKPHKLIRSAELA
NLSDSDKKKLVNTYDLSHIVDFRTSSEVAAKPDPKLTDVDYTHDSVMKDNGASTSTQDLTASLAKMDNPETFLINANKSF
ITDETSIQAYKDFFDILLANQDGSVLWHCTAGKDRAGFGTALVLSALGVDKNTVINDYMLSNKYRALENKKAIEAVAAKT
DNKKVIDGMTAVMEVRESYINAAFDEIDAKYGSMDNFLKEKLGLTDAKKEQLKKAYLY

Specific function: Unknown

COG id: COG2365

COG function: function code T; Protein tyrosine/serine phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the protein-tyrosine phosphatase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000387
- InterPro:   IPR016130 [H]

Pfam domain/function: NA

EC number: =3.1.3.48 [H]

Molecular weight: Translated: 32533; Mature: 32533

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHWVKVTGAGVLSATLLLGGCGAQSEEKAEANVKTEQTVKPGSQIKLEGAVNVRDLGGY
CCCEEEECCCHHHHHHHHHCCCCCCCCHHHHCCCCCHHCCCCCCEEEEECCCEEEECCCE
KTTDGLTIKPHKLIRSAELANLSDSDKKKLVNTYDLSHIVDFRTSSEVAAKPDPKLTDVD
ECCCCCEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
YTHDSVMKDNGASTSTQDLTASLAKMDNPETFLINANKSFITDETSIQAYKDFFDILLAN
CCCHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCEECCCHHHHHHHHHHHHEEEC
QDGSVLWHCTAGKDRAGFGTALVLSALGVDKNTVINDYMLSNKYRALENKKAIEAVAAKT
CCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCC
DNKKVIDGMTAVMEVRESYINAAFDEIDAKYGSMDNFLKEKLGLTDAKKEQLKKAYLY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKHWVKVTGAGVLSATLLLGGCGAQSEEKAEANVKTEQTVKPGSQIKLEGAVNVRDLGGY
CCCEEEECCCHHHHHHHHHCCCCCCCCHHHHCCCCCHHCCCCCCEEEEECCCEEEECCCE
KTTDGLTIKPHKLIRSAELANLSDSDKKKLVNTYDLSHIVDFRTSSEVAAKPDPKLTDVD
ECCCCCEECHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
YTHDSVMKDNGASTSTQDLTASLAKMDNPETFLINANKSFITDETSIQAYKDFFDILLAN
CCCHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCEECCCHHHHHHHHHHHHEEEC
QDGSVLWHCTAGKDRAGFGTALVLSALGVDKNTVINDYMLSNKYRALENKKAIEAVAAKT
CCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHCC
DNKKVIDGMTAVMEVRESYINAAFDEIDAKYGSMDNFLKEKLGLTDAKKEQLKKAYLY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8405966 [H]