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The map label for this gene is yvdE [H]

Identifier: 226224398

GI number: 226224398

Start: 1852774

End: 1853508

Strand: Reverse

Name: yvdE [H]

Synonym: Lm4b_01811

Alternate gene names: 226224398

Gene position: 1853508-1852774 (Counterclockwise)

Preceding gene: 226224399

Following gene: 226224397

Centisome position: 63.64

GC content: 41.77

Gene sequence:

>735_bases
ATGAAGCCAGTTATTGGAATTACCGGAAATAGATTAGTAAAAGGTGTGGACGTTTTTTACGGACACCGTGTGACTTATAC
GCAACAGCGATATGTAGATGCTATTCAAAAAGTTGGCGGATTTCCTATCGCTTTGCCAATAGATGACCCGTCTGTTGCCG
TTCAAGCAATTTCTCTCGTAGATGGTTTGCTTTTAACCGGTGGACAAGACATTACGCCACAATTTTATTTAGAAGAGCCG
TCCCAAGAAATCGGCGCTTATTTTCCACCTCGGGACAGCTATGAAATCGCCTTAGTTCGAGCAGCATTAGACGCTGGAAA
ACCGATTTTTGCTATTTGCCGCGGGATGCAACTAGTTAATGTGGCGTTAGGCGGCTCACTTTATCAAGATATCAGCCAAG
TCGAAACGAAAGCCCTCCAACATTTGCAGCGCGTCGATGAACAACTCGGCTCTCATACAATTGATATTGAACCGACAAGT
GAACTCGCAAAGCATCATCCAAATAAAAAATTAGTCAATTCATTGCATCACCAATTTATCAAAAAATTAGCGCCAAGTTT
TAAAGTAACAGCGCGTACTGCGGATGGAATGATTGAAGCTGTAGAAGGTGACAATTTGCCAAGTTGGTATTTAGGTGTTC
AGTGGCACCCAGAATTAATGTTCCAAGCAGATCCGGAAAGTGAACAATTATTCCGGGCATTAGTAGATGAATCCAAAAAA
ACTATGGTAAAATAA

Upstream 100 bases:

>100_bases
TCAATTTGGCGAGTTTTTTTATAACTATTTTTAAATAATCATCAGAGAAGCAATTACCTCACTAAATGTTGTAAAATAGA
ATAGAAATGGAGGAATTGTG

Downstream 100 bases:

>100_bases
GGACATAATCGCTAGTGGAGGTGTCCAGTGGAAATCATCCAAAAAGTTGTCGTCAAACAAATTCTAACCGAAGCAAGTAA
ACAAGAATTAATCGAGTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MKPVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQKVGGFPIALPIDDPSVAVQAISLVDGLLLTGGQDITPQFYLEEP
SQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLVNVALGGSLYQDISQVETKALQHLQRVDEQLGSHTIDIEPTS
ELAKHHPNKKLVNSLHHQFIKKLAPSFKVTARTADGMIEAVEGDNLPSWYLGVQWHPELMFQADPESEQLFRALVDESKK
TMVK

Sequences:

>Translated_244_residues
MKPVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQKVGGFPIALPIDDPSVAVQAISLVDGLLLTGGQDITPQFYLEEP
SQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLVNVALGGSLYQDISQVETKALQHLQRVDEQLGSHTIDIEPTS
ELAKHHPNKKLVNSLHHQFIKKLAPSFKVTARTADGMIEAVEGDNLPSWYLGVQWHPELMFQADPESEQLFRALVDESKK
TMVK
>Mature_244_residues
MKPVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQKVGGFPIALPIDDPSVAVQAISLVDGLLLTGGQDITPQFYLEEP
SQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLVNVALGGSLYQDISQVETKALQHLQRVDEQLGSHTIDIEPTS
ELAKHHPNKKLVNSLHHQFIKKLAPSFKVTARTADGMIEAVEGDNLPSWYLGVQWHPELMFQADPESEQLFRALVDESKK
TMVK

Specific function: Unknown

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=256, Percent_Identity=35.15625, Blast_Score=126, Evalue=1e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: NA

Molecular weight: Translated: 27046; Mature: 27046

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQKVGGFPIALPIDDPSVAVQAISLV
CCCCCCCCCCHHHHHHHHHHCCEEEEHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHH
DGLLLTGGQDITPQFYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLVN
HHHHHCCCCCCCCCEEECCCHHHCCCCCCCCCCHHHHHEEHHHHCCCHHHHHHCCHHHHH
VALGGSLYQDISQVETKALQHLQRVDEQLGSHTIDIEPTSELAKHHPNKKLVNSLHHQFI
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHCCCHHHHHHHHHHHH
KKLAPSFKVTARTADGMIEAVEGDNLPSWYLGVQWHPELMFQADPESEQLFRALVDESKK
HHHCCCCEEEEECCCCEEEECCCCCCCCEEEEEEECCCEEEECCCCHHHHHHHHHHHHHH
TMVK
HCCC
>Mature Secondary Structure
MKPVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQKVGGFPIALPIDDPSVAVQAISLV
CCCCCCCCCCHHHHHHHHHHCCEEEEHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHH
DGLLLTGGQDITPQFYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLVN
HHHHHCCCCCCCCCEEECCCHHHCCCCCCCCCCHHHHHEEHHHHCCCHHHHHHCCHHHHH
VALGGSLYQDISQVETKALQHLQRVDEQLGSHTIDIEPTSELAKHHPNKKLVNSLHHQFI
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHCCCHHHHHHHHHHHH
KKLAPSFKVTARTADGMIEAVEGDNLPSWYLGVQWHPELMFQADPESEQLFRALVDESKK
HHHCCCCEEEEECCCCEEEECCCCCCCCEEEEEEECCCEEEECCCCHHHHHHHHHHHHHH
TMVK
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]