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The map label for this gene is gatC

Identifier: 226224359

GI number: 226224359

Start: 1812846

End: 1813139

Strand: Reverse

Name: gatC

Synonym: Lm4b_01770

Alternate gene names: 226224359

Gene position: 1813139-1812846 (Counterclockwise)

Preceding gene: 226224360

Following gene: 226224358

Centisome position: 62.25

GC content: 37.07

Gene sequence:

>294_bases
TTGTCAAATATATCAAAAGAAACAGTAGAAAAAGTAGCAAATCTTGCCAAACTAGAAGTATCAGAAACAGAAGCAACAGC
CTTCGCTGGTCAGCTTGGTAAAATTATTGAGCTAGTAGAGCAATTAAATACATTAGATACAACGAATGTAGAACCTACCA
GCCATGCAATCGACGTATCAAACGTATTACGTGAAGATGTGGCAACAAAAGGGTTGGATCGCAAAGAAGTACTAAAAAAT
GCGCCTGATGAACAAGATGGCATGTTCAAAGTACCGACAATTATGGAACAATAA

Upstream 100 bases:

>100_bases
TCCTGTTGTATAATTATGCAGGAGAGGACAGTTCTTCCCATTTTTAACAGGCGGGAAGCACTACCGCGTAGTAAGTACCA
CTAAAAAGGAGGATGGCATT

Downstream 100 bases:

>100_bases
ATAGGCTAAGGAGGGAAAATATTTTGGGTTTATTTGATTTTTCAGTAAAAGAACTACATGATAAATTAGTTAAAAAAGAG
ATTTCACCATTCGATTTAGT

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C [H]

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MSNISKETVEKVANLAKLEVSETEATAFAGQLGKIIELVEQLNTLDTTNVEPTSHAIDVSNVLREDVATKGLDRKEVLKN
APDEQDGMFKVPTIMEQ

Sequences:

>Translated_97_residues
MSNISKETVEKVANLAKLEVSETEATAFAGQLGKIIELVEQLNTLDTTNVEPTSHAIDVSNVLREDVATKGLDRKEVLKN
APDEQDGMFKVPTIMEQ
>Mature_96_residues
SNISKETVEKVANLAKLEVSETEATAFAGQLGKIIELVEQLNTLDTTNVEPTSHAIDVSNVLREDVATKGLDRKEVLKNA
PDEQDGMFKVPTIMEQ

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003837 [H]

Pfam domain/function: PF02686 Glu-tRNAGln [H]

EC number: 6.3.5.-

Molecular weight: Translated: 10627; Mature: 10496

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNISKETVEKVANLAKLEVSETEATAFAGQLGKIIELVEQLNTLDTTNVEPTSHAIDVS
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
NVLREDVATKGLDRKEVLKNAPDEQDGMFKVPTIMEQ
HHHHHHHHHCCCCHHHHHHCCCCCCCCCEECCHHHCC
>Mature Secondary Structure 
SNISKETVEKVANLAKLEVSETEATAFAGQLGKIIELVEQLNTLDTTNVEPTSHAIDVS
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
NVLREDVATKGLDRKEVLKNAPDEQDGMFKVPTIMEQ
HHHHHHHHHCCCCHHHHHHCCCCCCCCCEECCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]