| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226224347
Identifier: 226224347
GI number: 226224347
Start: 1799887
End: 1800762
Strand: Reverse
Name: 226224347
Synonym: Lm4b_01758
Alternate gene names: NA
Gene position: 1800762-1799887 (Counterclockwise)
Preceding gene: 226224348
Following gene: 226224346
Centisome position: 61.82
GC content: 36.53
Gene sequence:
>876_bases ATGAAAATTTTAGTATTCGGTGGTACTCGTTTTTTTGGCAAGAAATTAGTGGAAAGACTTGTTTCAGAAGGACATGAGGT CACCATTGGGACAAGGGGCAAAACAGAAGATAATTTTGGTGATACTGTCAAACGGGTTATTTTAAATCGAGAATCAAGAG ATGCTTTATTCCAATTAGCAAAAGAAGACTGGGATGTTATTTACGATAATATATGTTTCTCTCCGAAAGAAGCACTTTAT GCCGTAGATGCATTTAAAGGCAAGGTAAAACGATACATATATACATCATCACTCTCTGTTTATAGTCAAAAAGGTCGAGC TTTAGTTGAAGCTGACTTTAATCCAGAGCATTATGAAATTGTTATTGGAGATAAAGAAGATTTTGATTACGGTGAAGGGA AACGACTTGCTGAAGCCGTATTTTTCCAAAAAGCTTCTTTTCCAGTAGTTGCAGTTCGTTTTCCAATCGTGCTTGGACTT GACGATTACACAAAACGCCTTCACTTTCATATTAATCATATTAAAAACCACCAAGAAATTGGGATTAGTAATGGACAAGC TGAGATTGGCTTTATTACTTCTGATGAAGCGGCGCATTTTTTAGAGTGGGTTGGTGTGGAATCGGATCTGACAGGACCGG TAAACGCTACCTCCAATGGCACATACGCATTAAATGGTTTCATCAAAATGCTTGAAGAAAAAATCGGGAAATTAGCACTA GTTGAAGAGGTGACGGATGACGTCGATGATTCTCCGTTTGGCATTGAAAAAACCTATTATTTAGATAATACGAAAGCTAC CGAAGCTGGTTTTGTGTTTAATGATTTAAAAGTATGGTTACCAGCTTTAGTGACAGCTATTTTAAAAGAAAATTAA
Upstream 100 bases:
>100_bases GAAAAAAGGCCAAGGATATATGATTGAATGACGAAAAAACAGGAAGATAGCGCTAAAAAACGCGAACTTCCTGTTTTTCG TAAATGGAGGAGGAGTCTAA
Downstream 100 bases:
>100_bases TTTGGGGGAAAAATAATACTATGTTAAACTTTGAAGAAAAAAAAGCATTAATAGAATCTATCGACGGCTTTGAATTACAC GAAATTTCTATGGGCCGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Reductase; Isoflavone Reductase; Nucleoside-Diphosphate-Sugar Epimerase; NAD-Dependent Epimerase/Dehydratase Family Protein; NAD Dependent Epimerase/Dehydratase Family Protein; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; Dtdpglucose 4 6-Dehydratase-Like Protein; Isoflavone_redu Isoflavone Reductase; NAD Dependent Epimerase; NAD Dependent Epimerase/Dehydratase Family; NAD Dependent Epimerase/Dehydratase
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MKILVFGGTRFFGKKLVERLVSEGHEVTIGTRGKTEDNFGDTVKRVILNRESRDALFQLAKEDWDVIYDNICFSPKEALY AVDAFKGKVKRYIYTSSLSVYSQKGRALVEADFNPEHYEIVIGDKEDFDYGEGKRLAEAVFFQKASFPVVAVRFPIVLGL DDYTKRLHFHINHIKNHQEIGISNGQAEIGFITSDEAAHFLEWVGVESDLTGPVNATSNGTYALNGFIKMLEEKIGKLAL VEEVTDDVDDSPFGIEKTYYLDNTKATEAGFVFNDLKVWLPALVTAILKEN
Sequences:
>Translated_291_residues MKILVFGGTRFFGKKLVERLVSEGHEVTIGTRGKTEDNFGDTVKRVILNRESRDALFQLAKEDWDVIYDNICFSPKEALY AVDAFKGKVKRYIYTSSLSVYSQKGRALVEADFNPEHYEIVIGDKEDFDYGEGKRLAEAVFFQKASFPVVAVRFPIVLGL DDYTKRLHFHINHIKNHQEIGISNGQAEIGFITSDEAAHFLEWVGVESDLTGPVNATSNGTYALNGFIKMLEEKIGKLAL VEEVTDDVDDSPFGIEKTYYLDNTKATEAGFVFNDLKVWLPALVTAILKEN >Mature_291_residues MKILVFGGTRFFGKKLVERLVSEGHEVTIGTRGKTEDNFGDTVKRVILNRESRDALFQLAKEDWDVIYDNICFSPKEALY AVDAFKGKVKRYIYTSSLSVYSQKGRALVEADFNPEHYEIVIGDKEDFDYGEGKRLAEAVFFQKASFPVVAVRFPIVLGL DDYTKRLHFHINHIKNHQEIGISNGQAEIGFITSDEAAHFLEWVGVESDLTGPVNATSNGTYALNGFIKMLEEKIGKLAL VEEVTDDVDDSPFGIEKTYYLDNTKATEAGFVFNDLKVWLPALVTAILKEN
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32753; Mature: 32753
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILVFGGTRFFGKKLVERLVSEGHEVTIGTRGKTEDNFGDTVKRVILNRESRDALFQLA CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHH KEDWDVIYDNICFSPKEALYAVDAFKGKVKRYIYTSSLSVYSQKGRALVEADFNPEHYEI HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEECCHHHHHCCCCEEEEECCCCCEEEE VIGDKEDFDYGEGKRLAEAVFFQKASFPVVAVRFPIVLGLDDYTKRLHFHINHIKNHQEI EEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEECCHHHHHHHHEEHHHHCCCHHC GISNGQAEIGFITSDEAAHFLEWVGVESDLTGPVNATSNGTYALNGFIKMLEEKIGKLAL CCCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCEEH VEEVTDDVDDSPFGIEKTYYLDNTKATEAGFVFNDLKVWLPALVTAILKEN HHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKILVFGGTRFFGKKLVERLVSEGHEVTIGTRGKTEDNFGDTVKRVILNRESRDALFQLA CEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHH KEDWDVIYDNICFSPKEALYAVDAFKGKVKRYIYTSSLSVYSQKGRALVEADFNPEHYEI HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHEEEECCHHHHHCCCCEEEEECCCCCEEEE VIGDKEDFDYGEGKRLAEAVFFQKASFPVVAVRFPIVLGLDDYTKRLHFHINHIKNHQEI EEECCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEEEECCHHHHHHHHEEHHHHCCCHHC GISNGQAEIGFITSDEAAHFLEWVGVESDLTGPVNATSNGTYALNGFIKMLEEKIGKLAL CCCCCCEEEEEEECCHHHHHHHHHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHCCEEH VEEVTDDVDDSPFGIEKTYYLDNTKATEAGFVFNDLKVWLPALVTAILKEN HHHHHHCCCCCCCCCEEEEEECCCCCCCCCEEHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA