Click here to switch to the map view.

The map label for this gene is ydeI [H]

Identifier: 226223845

GI number: 226223845

Start: 1254840

End: 1255433

Strand: Reverse

Name: ydeI [H]

Synonym: Lm4b_01250

Alternate gene names: 226223845

Gene position: 1255433-1254840 (Counterclockwise)

Preceding gene: 226223846

Following gene: 226223836

Centisome position: 43.1

GC content: 37.37

Gene sequence:

>594_bases
ATGGCAAAAACCGAATTAAATCCTAAAGTAGATGCGTTTCTAAGTAAACCATCCACTTGGCAAGCTGAATTCAAAGCATT
AAGAGAAATAGCAATCACGTTTGAACTAGAAGAAGAATTCAAATGGGGGAAACCTTGTTACGCTATTAATGGCAGCAACG
TTTTCTTAATTCATGGTTTTAAAAACTACTGTGCACTACTCTTTATGAAAGGCGCACTACTCCGTGATCCGGAAAACATT
TTAGTTCAGCAAACAGAAAATGTGCAAGCTGCCAGACAAATCCGCTTCACAAATTTACAGGAAATTCTTGATCAAAAAGA
ATTTCTAAAGGCGTATATTCAAAATGCAATTGAAGTAGAAAAAGCTGGGTTAGAAGTGGAACTTAAACCAAGGGAAGAAA
CGCCTATTCCAGAAGAATTACTCGCTAAATTTGAAGAAATGCCTGCGCTACAAACAGCTTTTGAAGCCTTAACTCCTGGT
CGTCAAAAAGCTTACTTGCTCTATTTTGCGGCTCCAAAGCAATCAAAAACGCGTGTTTCGCGCATTGAAAAATACGAAGC
AACGATTTTAGATGGATTAGGATTAAACGATTAA

Upstream 100 bases:

>100_bases
TTAAGTCCATTTTTAGTAGGCCGACCAAATTTGCAAGGCCTTTCATATTAAGTTAAAATAACACGTATCAAAGAAAAAGT
GTGGAAAAGAGGAATTCTTT

Downstream 100 bases:

>100_bases
TCGAAAAAAAGCGCACCCTGCGTGAAGGTTGCGCTTTTTTATTTATTTTACTTCTTCAAAATCATCTAATTGCCAACTGC
TATCAAAGGCTGGTTCGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MAKTELNPKVDAFLSKPSTWQAEFKALREIAITFELEEEFKWGKPCYAINGSNVFLIHGFKNYCALLFMKGALLRDPENI
LVQQTENVQAARQIRFTNLQEILDQKEFLKAYIQNAIEVEKAGLEVELKPREETPIPEELLAKFEEMPALQTAFEALTPG
RQKAYLLYFAAPKQSKTRVSRIEKYEATILDGLGLND

Sequences:

>Translated_197_residues
MAKTELNPKVDAFLSKPSTWQAEFKALREIAITFELEEEFKWGKPCYAINGSNVFLIHGFKNYCALLFMKGALLRDPENI
LVQQTENVQAARQIRFTNLQEILDQKEFLKAYIQNAIEVEKAGLEVELKPREETPIPEELLAKFEEMPALQTAFEALTPG
RQKAYLLYFAAPKQSKTRVSRIEKYEATILDGLGLND
>Mature_196_residues
AKTELNPKVDAFLSKPSTWQAEFKALREIAITFELEEEFKWGKPCYAINGSNVFLIHGFKNYCALLFMKGALLRDPENIL
VQQTENVQAARQIRFTNLQEILDQKEFLKAYIQNAIEVEKAGLEVELKPREETPIPEELLAKFEEMPALQTAFEALTPGR
QKAYLLYFAAPKQSKTRVSRIEKYEATILDGLGLND

Specific function: Unknown

COG id: COG4430

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014922
- InterPro:   IPR016786 [H]

Pfam domain/function: PF08818 DUF1801 [H]

EC number: NA

Molecular weight: Translated: 22546; Mature: 22415

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTELNPKVDAFLSKPSTWQAEFKALREIAITFELEEEFKWGKPCYAINGSNVFLIHGF
CCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHEEEEHHHCCCCCCEEEECCCCEEEEECH
KNYCALLFMKGALLRDPENILVQQTENVQAARQIRFTNLQEILDQKEFLKAYIQNAIEVE
HHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAGLEVELKPREETPIPEELLAKFEEMPALQTAFEALTPGRQKAYLLYFAAPKQSKTRVS
HCCCEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHH
RIEKYEATILDGLGLND
HHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AKTELNPKVDAFLSKPSTWQAEFKALREIAITFELEEEFKWGKPCYAINGSNVFLIHGF
CCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHEEEEHHHCCCCCCEEEECCCCEEEEECH
KNYCALLFMKGALLRDPENILVQQTENVQAARQIRFTNLQEILDQKEFLKAYIQNAIEVE
HHHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAGLEVELKPREETPIPEELLAKFEEMPALQTAFEALTPGRQKAYLLYFAAPKQSKTRVS
HCCCEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHH
RIEKYEATILDGLGLND
HHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]