| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226223841
Identifier: 226223841
GI number: 226223841
Start: 1248018
End: 1248491
Strand: Direct
Name: 226223841
Synonym: Lm4b_01246
Alternate gene names: NA
Gene position: 1248018-1248491 (Clockwise)
Preceding gene: 226223840
Following gene: 226223842
Centisome position: 42.85
GC content: 29.54
Gene sequence:
>474_bases ATGACTTTTTTAAACACCTTAAAATTAAATTTGGAAAATGAAAAAAAGAGAATGTTATCCGATGCTTTTATGAAAAAACA AGAAGGAATCATTGTAAACTATATAGTGACTTGCAGTAAGGATTCTGCTATTGGCATTAGTAAAAAGGCAATTGATATAT TATTGATAATCAATGAAAATACATTTCCTGAATGGCCAAATGTAGATAGATGGCTTTCTATTTTGCCAAAATATTTTACG GATTCTTTTTCAAAATCAAAAATATTGCATAGTGAAGATTGGCTATTTGAAGAGTGGTTATACTGGTTTGAACCTGAAAA TAGATTTTGGTTTTTAGGAGAATTAGATCCTGTTGATAATGAGCATTTGAAAATAAGCATAGTTGTACAAGAACACCCTT TTCCAGTAGAATCATTAGAAGTTCTACTTATGAAGCTAGGAACAAGCGAATTACATGAAATTGGTATGGAATGA
Upstream 100 bases:
>100_bases TGAAAACGATAGAAGCAATTATAGGTATCGACTACCATATATTACTGAAAAAAGAGCTAGATTAAATAAAAAAATAATTC TAACATCATAGGAGGCAATT
Downstream 100 bases:
>100_bases GGTTAAATGTACTTTTAACGGATATATCTTTTACAATAGAGCTGAATTTTGTTAGAGTTTAAAATGAAAAAACAACTAAG TTATAACGAAAGGAGCTAAC
Product: gpI
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MTFLNTLKLNLENEKKRMLSDAFMKKQEGIIVNYIVTCSKDSAIGISKKAIDILLIINENTFPEWPNVDRWLSILPKYFT DSFSKSKILHSEDWLFEEWLYWFEPENRFWFLGELDPVDNEHLKISIVVQEHPFPVESLEVLLMKLGTSELHEIGME
Sequences:
>Translated_157_residues MTFLNTLKLNLENEKKRMLSDAFMKKQEGIIVNYIVTCSKDSAIGISKKAIDILLIINENTFPEWPNVDRWLSILPKYFT DSFSKSKILHSEDWLFEEWLYWFEPENRFWFLGELDPVDNEHLKISIVVQEHPFPVESLEVLLMKLGTSELHEIGME >Mature_156_residues TFLNTLKLNLENEKKRMLSDAFMKKQEGIIVNYIVTCSKDSAIGISKKAIDILLIINENTFPEWPNVDRWLSILPKYFTD SFSKSKILHSEDWLFEEWLYWFEPENRFWFLGELDPVDNEHLKISIVVQEHPFPVESLEVLLMKLGTSELHEIGME
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18538; Mature: 18406
Theoretical pI: Translated: 4.57; Mature: 4.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFLNTLKLNLENEKKRMLSDAFMKKQEGIIVNYIVTCSKDSAIGISKKAIDILLIINEN CCCEEEEEEEECHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEECC TFPEWPNVDRWLSILPKYFTDSFSKSKILHSEDWLFEEWLYWFEPENRFWFLGELDPVDN CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHEEECCCCCEEEEECCCCCCC EHLKISIVVQEHPFPVESLEVLLMKLGTSELHEIGME CCEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHCCCC >Mature Secondary Structure TFLNTLKLNLENEKKRMLSDAFMKKQEGIIVNYIVTCSKDSAIGISKKAIDILLIINEN CCEEEEEEEECHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCEEEEEEEEECC TFPEWPNVDRWLSILPKYFTDSFSKSKILHSEDWLFEEWLYWFEPENRFWFLGELDPVDN CCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHEEECCCCCEEEEECCCCCCC EHLKISIVVQEHPFPVESLEVLLMKLGTSELHEIGME CCEEEEEEEECCCCCHHHHHHHHHHHCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA