Click here to switch to the map view.

The map label for this gene is 226223813

Identifier: 226223813

GI number: 226223813

Start: 1215145

End: 1215456

Strand: Direct

Name: 226223813

Synonym: Lm4b_01218

Alternate gene names: NA

Gene position: 1215145-1215456 (Clockwise)

Preceding gene: 226223812

Following gene: 226223814

Centisome position: 41.72

GC content: 37.5

Gene sequence:

>312_bases
ATGAATGAAAAATTACGGAAAGCCTATCTTCCAATGACCGAAACCGCTTTTTACATATTACTATCGCTCGTCAAACCAAG
GCACGGTTACGCGATTATCGAAAACGTCGCAAAGATGACAGATGATCGAATCAAGCTTGGTCCCGGGACTATTTACGGAA
GCTTATCCAAAATGAACAAAGATAATTTGATCCAAATTATTCAAGAAGAGAGTAATCGGAAAATCTATCAAATTACTGAA
ATTGGCACAGATATTTTGCAATTAGAAAAAGCGCGCATCGAAGAATTGTATAGAAACTCAAGGGAGGTCTAA

Upstream 100 bases:

>100_bases
AGAAAAAACGGTATTTCAAGAAATAAAAAATGGGGTATTGCAAATTATATCGAGCCGTGATATATTATAAGCATCAAATA
CATCGAGGTGCGATATAGTT

Downstream 100 bases:

>100_bases
TAATGGAGAAAAAAGTCGTTAAGTTTTTTACCGTGGACAATATGAAGAAAGAAGAAGCCTATTTAAATGAAATGGCACAA
AATGGTTGGTTCTTTCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator PadR-Like Family; PadR-Like Family Transcriptional Regulator; Transcriptional Regulator PadR Family; Transcriptional Regulator PadR Family Protein; Transcriptional Regulator; PadR Family Regulatory Protein

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MNEKLRKAYLPMTETAFYILLSLVKPRHGYAIIENVAKMTDDRIKLGPGTIYGSLSKMNKDNLIQIIQEESNRKIYQITE
IGTDILQLEKARIEELYRNSREV

Sequences:

>Translated_103_residues
MNEKLRKAYLPMTETAFYILLSLVKPRHGYAIIENVAKMTDDRIKLGPGTIYGSLSKMNKDNLIQIIQEESNRKIYQITE
IGTDILQLEKARIEELYRNSREV
>Mature_103_residues
MNEKLRKAYLPMTETAFYILLSLVKPRHGYAIIENVAKMTDDRIKLGPGTIYGSLSKMNKDNLIQIIQEESNRKIYQITE
IGTDILQLEKARIEELYRNSREV

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11989; Mature: 11989

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEKLRKAYLPMTETAFYILLSLVKPRHGYAIIENVAKMTDDRIKLGPGTIYGSLSKMNK
CCCHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEECCCCHHHHHHHHCCH
DNLIQIIQEESNRKIYQITEIGTDILQLEKARIEELYRNSREV
HHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNEKLRKAYLPMTETAFYILLSLVKPRHGYAIIENVAKMTDDRIKLGPGTIYGSLSKMNK
CCCHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEECCCCHHHHHHHHCCH
DNLIQIIQEESNRKIYQITEIGTDILQLEKARIEELYRNSREV
HHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA