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The map label for this gene is cbiM [H]

Identifier: 226223804

GI number: 226223804

Start: 1208944

End: 1209678

Strand: Direct

Name: cbiM [H]

Synonym: Lm4b_01208

Alternate gene names: 226223804

Gene position: 1208944-1209678 (Clockwise)

Preceding gene: 226223803

Following gene: 226223805

Centisome position: 41.51

GC content: 40.41

Gene sequence:

>735_bases
ATGAAAAAATTATGGAAGTTTCTACCATTTGTTTTAATCGGTGTTATTTATTTTACTTTAACGAATCCAGAATCCGCACA
CGCAATGCATATTATGGAGGGCTTTTTACCAGTTAAATGGGCTGTCTTTTGGTTCATTGTATTTATCCCATTCCTTGTAC
TTGGTTTAATTCGTATTCGTAAATTAATTGCCCTAGATAAAAACAACAAATTACTGTTGGCACTATGCGCAGCCTTTATC
TTTGTTCTTTCAGCGCTTAAAATTCCGTCCGTTACAGGATCTTGTTCTCATCCGACTGGTGTTGGCCTTGCAACTGTTAT
GTTCGGACCGCTCGTTGTCAGTGTACTTGGTGTGATTGTCTTACTTTTCCAAGCGTTACTACTTGCACACGGCGGTATTA
CAACTCTTGGCGCAAACGCAATGTCGATGGCGGTTATCGGTCCAATGGTTGGTTTTGTCGTATACAAACTCGCTCGTAAA
TTAAACTGTAATAAAAGTGTTTCGATTTTCTTATGTGCGATGACAGCTGACTTAGCAACCTACTTAACTACCAGCGTCCA
GCTCGGAGTCGTTTTCCCAGATCCAGCATCCGGCATGATGGCATCTATTCTGAAGTTCATGGCGATTTTCTGTGTGACAC
AAGTTCCAATTGCGATTGCAGAAGGATTGCTAACGGTAGTCATGTACAATCTTATTAGCAAAAATTTACCAGAAAAGGTG
GCACAATTACGATGA

Upstream 100 bases:

>100_bases
CGACTGAAAAAATCACATACGGCATGAACGAGATAAACCCAGACGAAAAAATGTCATACTTTACCACGATTATCGTGAAA
AAAAGAAGGGAGCAATATAA

Downstream 100 bases:

>100_bases
AAAAAATAAATATCAATGTCATTTTAATTCTATTAGTAGTATTGTTAATGGTTAGTCCATTCTTCTTCAATAAAACGGGA
GAATACGGCGGCTCGGACGG

Product: cobalt transport protein CbiM

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 244; Mature: 244

Protein sequence:

>244_residues
MKKLWKFLPFVLIGVIYFTLTNPESAHAMHIMEGFLPVKWAVFWFIVFIPFLVLGLIRIRKLIALDKNNKLLLALCAAFI
FVLSALKIPSVTGSCSHPTGVGLATVMFGPLVVSVLGVIVLLFQALLLAHGGITTLGANAMSMAVIGPMVGFVVYKLARK
LNCNKSVSIFLCAMTADLATYLTTSVQLGVVFPDPASGMMASILKFMAIFCVTQVPIAIAEGLLTVVMYNLISKNLPEKV
AQLR

Sequences:

>Translated_244_residues
MKKLWKFLPFVLIGVIYFTLTNPESAHAMHIMEGFLPVKWAVFWFIVFIPFLVLGLIRIRKLIALDKNNKLLLALCAAFI
FVLSALKIPSVTGSCSHPTGVGLATVMFGPLVVSVLGVIVLLFQALLLAHGGITTLGANAMSMAVIGPMVGFVVYKLARK
LNCNKSVSIFLCAMTADLATYLTTSVQLGVVFPDPASGMMASILKFMAIFCVTQVPIAIAEGLLTVVMYNLISKNLPEKV
AQLR
>Mature_244_residues
MKKLWKFLPFVLIGVIYFTLTNPESAHAMHIMEGFLPVKWAVFWFIVFIPFLVLGLIRIRKLIALDKNNKLLLALCAAFI
FVLSALKIPSVTGSCSHPTGVGLATVMFGPLVVSVLGVIVLLFQALLLAHGGITTLGANAMSMAVIGPMVGFVVYKLARK
LNCNKSVSIFLCAMTADLATYLTTSVQLGVVFPDPASGMMASILKFMAIFCVTQVPIAIAEGLLTVVMYNLISKNLPEKV
AQLR

Specific function: Unknown

COG id: COG0310

COG function: function code P; ABC-type Co2+ transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiM family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002751
- InterPro:   IPR018024 [H]

Pfam domain/function: PF01891 CbiM [H]

EC number: NA

Molecular weight: Translated: 26420; Mature: 26420

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHCC
>Mature Secondary Structure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HHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8501034; 11677609 [H]