| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226223790
Identifier: 226223790
GI number: 226223790
Start: 1196674
End: 1197168
Strand: Direct
Name: 226223790
Synonym: Lm4b_01194
Alternate gene names: NA
Gene position: 1196674-1197168 (Clockwise)
Preceding gene: 226223788
Following gene: 226223791
Centisome position: 41.08
GC content: 40.0
Gene sequence:
>495_bases TTGAAAATTCAAAAATTAGTCTTATGTGCGATGTTGATTGCAATGTGTGTAATTGGCGCAAACATAAAATTAATGGGTTC AGTTGCATTTGACGCAGCCCCAGCTTTTATTGGGACTTTGCTGCTTGGTCCGATGTACGGAGCAGTGCTTGGGATTTTCG GTCATTTAACATCAGCATTACTAGCGGGTTTTCCGCTCACACTACCAATTCATTTGATTGTTGCTGGAATGATGGGCGTA ACGATGATTGCTTATGGCTTTACGCGCCAAAAACTAGCAGAAAAGAATCAATTAGTTGCGGTTAGTGTTTCTAGTATTGT TGCTTTTGTTTTTAATTGTCCATTATCATTACTTGCACTTTATCCATTAATGCATCAAGCGGTGTTTGTTTTGTTCCCAG TGCTTGCTATTGGTTCGATTTGCAACATTTTTGTCGCAGAAGTCGTTTACCAAGTATTGCCAGAACGCTGGAAAAGACGA ATTGCCGGGTACTAA
Upstream 100 bases:
>100_bases ACTATTTTGTTTTTCATGCTCTAAGTGACCTTGTACCAGTGGTTTAACAGGGATATAATGAAATGGAAATAACGCTTTCA TGAGAGGGTGATCTTTTCAA
Downstream 100 bases:
>100_bases ACAACTAAATAGGTGAATATATTAATCCGGGAAAGAGGTGAAAATCCTCTACAGGCCCTAGCTACTGTAATACGGACGAA AACCAAACATATGTCACTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MKIQKLVLCAMLIAMCVIGANIKLMGSVAFDAAPAFIGTLLLGPMYGAVLGIFGHLTSALLAGFPLTLPIHLIVAGMMGV TMIAYGFTRQKLAEKNQLVAVSVSSIVAFVFNCPLSLLALYPLMHQAVFVLFPVLAIGSICNIFVAEVVYQVLPERWKRR IAGY
Sequences:
>Translated_164_residues MKIQKLVLCAMLIAMCVIGANIKLMGSVAFDAAPAFIGTLLLGPMYGAVLGIFGHLTSALLAGFPLTLPIHLIVAGMMGV TMIAYGFTRQKLAEKNQLVAVSVSSIVAFVFNCPLSLLALYPLMHQAVFVLFPVLAIGSICNIFVAEVVYQVLPERWKRR IAGY >Mature_164_residues MKIQKLVLCAMLIAMCVIGANIKLMGSVAFDAAPAFIGTLLLGPMYGAVLGIFGHLTSALLAGFPLTLPIHLIVAGMMGV TMIAYGFTRQKLAEKNQLVAVSVSSIVAFVFNCPLSLLALYPLMHQAVFVLFPVLAIGSICNIFVAEVVYQVLPERWKRR IAGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17630; Mature: 17630
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 5.5 %Met (Translated Protein) 7.9 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 5.5 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIQKLVLCAMLIAMCVIGANIKLMGSVAFDAAPAFIGTLLLGPMYGAVLGIFGHLTSAL CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGFPLTLPIHLIVAGMMGVTMIAYGFTRQKLAEKNQLVAVSVSSIVAFVFNCPLSLLAL HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH YPLMHQAVFVLFPVLAIGSICNIFVAEVVYQVLPERWKRRIAGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKIQKLVLCAMLIAMCVIGANIKLMGSVAFDAAPAFIGTLLLGPMYGAVLGIFGHLTSAL CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LAGFPLTLPIHLIVAGMMGVTMIAYGFTRQKLAEKNQLVAVSVSSIVAFVFNCPLSLLAL HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH YPLMHQAVFVLFPVLAIGSICNIFVAEVVYQVLPERWKRRIAGY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA