| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226223726
Identifier: 226223726
GI number: 226223726
Start: 1141512
End: 1141967
Strand: Direct
Name: 226223726
Synonym: Lm4b_01129
Alternate gene names: NA
Gene position: 1141512-1141967 (Clockwise)
Preceding gene: 226223725
Following gene: 226223730
Centisome position: 39.19
GC content: 35.09
Gene sequence:
>456_bases ATGGAGTATGAACAGCTGTTACAAAGCGAACTTGGTGAACTTGAAATAATTCGGGAAGAACTACAAAACAAAGAATATCG AGGAATGATTGTAAAAACGGCTAAAGATGGCACAACGATTCGTACGCGTTTGGCGAAGAAAACAGATAAAAAAGCAGGGT ACTTTGTTGCTTTTTGGGAGAAAGGTGAATTTGGTAAGAATTGTCCTTTTGATGAGAATGATAGCGCTGATTTTTTAAGC ATTGTTGTTATGGATGGTGATTTGAACGGTTTATTTGTTTTTCCAAGGCAGTGTTTAATTGATAAGGAGATTTTAACTAG TGAAGCTGGTATTGGAAAAATGGCTGCTAGATTTTATCCAACATGGTGTCAGGATTTAAATAAAACAGCGAAAAAAACGC AAGCTTGGCAACAGGCGTATTTTAAAAATTATTCTATAAGAAAAGAAGACCATTAA
Upstream 100 bases:
>100_bases TTTTATTTGAAGCATGGATTTGTGGTTTCTTCTAGAAGTGATGCGGACGGTTTTGGTAAGCCCTATCCAATTCTTCATTT GCAACTGAAGGAGAGCGTTA
Downstream 100 bases:
>100_bases TTTGGTCTTCTTTTTATTGTATAGAGACTACTTGCTCGCAGTAATCTAAGTAAGCATCGTCTACTAGAAAATATTTTGGA ACCATTAAGCCAACAATATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MEYEQLLQSELGELEIIREELQNKEYRGMIVKTAKDGTTIRTRLAKKTDKKAGYFVAFWEKGEFGKNCPFDENDSADFLS IVVMDGDLNGLFVFPRQCLIDKEILTSEAGIGKMAARFYPTWCQDLNKTAKKTQAWQQAYFKNYSIRKEDH
Sequences:
>Translated_151_residues MEYEQLLQSELGELEIIREELQNKEYRGMIVKTAKDGTTIRTRLAKKTDKKAGYFVAFWEKGEFGKNCPFDENDSADFLS IVVMDGDLNGLFVFPRQCLIDKEILTSEAGIGKMAARFYPTWCQDLNKTAKKTQAWQQAYFKNYSIRKEDH >Mature_151_residues MEYEQLLQSELGELEIIREELQNKEYRGMIVKTAKDGTTIRTRLAKKTDKKAGYFVAFWEKGEFGKNCPFDENDSADFLS IVVMDGDLNGLFVFPRQCLIDKEILTSEAGIGKMAARFYPTWCQDLNKTAKKTQAWQQAYFKNYSIRKEDH
Specific function: Unknown
COG id: COG4815
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17525; Mature: 17525
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEYEQLLQSELGELEIIREELQNKEYRGMIVKTAKDGTTIRTRLAKKTDKKAGYFVAFWE CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEC KGEFGKNCPFDENDSADFLSIVVMDGDLNGLFVFPRQCLIDKEILTSEAGIGKMAARFYP CCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCHHHHHHHHHHHCCCCCHHHHHHHCC TWCQDLNKTAKKTQAWQQAYFKNYSIRKEDH HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MEYEQLLQSELGELEIIREELQNKEYRGMIVKTAKDGTTIRTRLAKKTDKKAGYFVAFWE CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHHHHCCCCCCEEEEEEC KGEFGKNCPFDENDSADFLSIVVMDGDLNGLFVFPRQCLIDKEILTSEAGIGKMAARFYP CCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEECCHHHHHHHHHHHCCCCCHHHHHHHCC TWCQDLNKTAKKTQAWQQAYFKNYSIRKEDH HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA