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The map label for this gene is liaF [H]

Identifier: 226223638

GI number: 226223638

Start: 1050324

End: 1051037

Strand: Direct

Name: liaF [H]

Synonym: Lm4b_01040

Alternate gene names: 226223638

Gene position: 1050324-1051037 (Clockwise)

Preceding gene: 226223637

Following gene: 226223639

Centisome position: 36.06

GC content: 37.68

Gene sequence:

>714_bases
TTGAAAAAAATGGAAAGCTCGGTTGTTTTTGTATTTTTAATTGCGATTATTGTTGGCGTTGGTTTGGAGATGCTGTTCCA
GTGGGAGTTGCTTATTTTATTTGCACTCGGGATATTTTTTATCTTTACATCAAGGAAGGCAAGCGCAACAAAGAAAAGTG
CAAGAAACTCATTATTTATTGGTATCGTATTTATCATTATCGCCGTGTTACTTACAACCACGTTTAAAGTTGGGCTTGTT
GTTGCAGGTATTTATGCGATCATTCACTACATTAGTAGGAAGCGGGCACCCCAATTATTGATGCTCAAAACGAGAGAACC
TGACAGCAAGATTGACCGTACGGATAAGTTTATTCGTAATCAGTGGTTCGGTAACCAGCGTATACTTGATGTAGTGTATG
AATGGGATGACATCAATATTCAAACAGGGATTGGTGATACGATTCTTGATTTAGGGAACACGGTCTTACCAACTGGCGAA
AGTGTCATTATGATTCGTAGTGTCTCAGGAAAAATTCGGGTACTTGTTCCATTTGATATCGGTATTTGCATTGAACATTC
CGCAATTTTCGGAAACATCCAATATGATAAAGAAAGCACCTCTATTCAAAATAATAGCATCAAGGTCTACTCAGATAATT
ACGAAAGTTCCGCACGAAAAGTGAAAATCATGACTTCTGTAATCTTCGGAGATTTAGAGGTGATTAGACTATGA

Upstream 100 bases:

>100_bases
TCAATCAGTAAATCCTCGCTATAATTAACACAGCATGTACAAAGTAGCAAAAATCGAGAAATAACTTTGTCAAAAGAGGA
ACGTAAGGAGGTGTGTCAGC

Downstream 100 bases:

>100_bases
GTTTTTCGAAACTGATGATGGCTGTTTGCTCAGGGTTACTACTTGTTGCTACAGCCATCGGTACGGTCGGTTACTATTTT
TTTAGTGAAGGTTCTTGGTA

Product: YvqF protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MKKMESSVVFVFLIAIIVGVGLEMLFQWELLILFALGIFFIFTSRKASATKKSARNSLFIGIVFIIIAVLLTTTFKVGLV
VAGIYAIIHYISRKRAPQLLMLKTREPDSKIDRTDKFIRNQWFGNQRILDVVYEWDDINIQTGIGDTILDLGNTVLPTGE
SVIMIRSVSGKIRVLVPFDIGICIEHSAIFGNIQYDKESTSIQNNSIKVYSDNYESSARKVKIMTSVIFGDLEVIRL

Sequences:

>Translated_237_residues
MKKMESSVVFVFLIAIIVGVGLEMLFQWELLILFALGIFFIFTSRKASATKKSARNSLFIGIVFIIIAVLLTTTFKVGLV
VAGIYAIIHYISRKRAPQLLMLKTREPDSKIDRTDKFIRNQWFGNQRILDVVYEWDDINIQTGIGDTILDLGNTVLPTGE
SVIMIRSVSGKIRVLVPFDIGICIEHSAIFGNIQYDKESTSIQNNSIKVYSDNYESSARKVKIMTSVIFGDLEVIRL
>Mature_237_residues
MKKMESSVVFVFLIAIIVGVGLEMLFQWELLILFALGIFFIFTSRKASATKKSARNSLFIGIVFIIIAVLLTTTFKVGLV
VAGIYAIIHYISRKRAPQLLMLKTREPDSKIDRTDKFIRNQWFGNQRILDVVYEWDDINIQTGIGDTILDLGNTVLPTGE
SVIMIRSVSGKIRVLVPFDIGICIEHSAIFGNIQYDKESTSIQNNSIKVYSDNYESSARKVKIMTSVIFGDLEVIRL

Specific function: Unknown

COG id: COG4758

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016975 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26735; Mature: 26735

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKMESSVVFVFLIAIIVGVGLEMLFQWELLILFALGIFFIFTSRKASATKKSARNSLFI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHH
GIVFIIIAVLLTTTFKVGLVVAGIYAIIHYISRKRAPQLLMLKTREPDSKIDRTDKFIRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHH
QWFGNQRILDVVYEWDDINIQTGIGDTILDLGNTVLPTGESVIMIRSVSGKIRVLVPFDI
HCCCCCEEEEEEEECCCCEEECCCCHHHHHCCCEECCCCCCEEEEEECCCEEEEEEEECC
GICIEHSAIFGNIQYDKESTSIQNNSIKVYSDNYESSARKVKIMTSVIFGDLEVIRL
CEEEECCEEEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCEEEEEC
>Mature Secondary Structure
MKKMESSVVFVFLIAIIVGVGLEMLFQWELLILFALGIFFIFTSRKASATKKSARNSLFI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHH
GIVFIIIAVLLTTTFKVGLVVAGIYAIIHYISRKRAPQLLMLKTREPDSKIDRTDKFIRN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHH
QWFGNQRILDVVYEWDDINIQTGIGDTILDLGNTVLPTGESVIMIRSVSGKIRVLVPFDI
HCCCCCEEEEEEEECCCCEEECCCCHHHHHCCCEECCCCCCEEEEEECCCEEEEEEEECC
GICIEHSAIFGNIQYDKESTSIQNNSIKVYSDNYESSARKVKIMTSVIFGDLEVIRL
CEEEECCEEEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377; 12207695 [H]