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The map label for this gene is gbuC

Identifier: 226223634

GI number: 226223634

Start: 1046921

End: 1047823

Strand: Direct

Name: gbuC

Synonym: Lm4b_01036

Alternate gene names: 226223634

Gene position: 1046921-1047823 (Clockwise)

Preceding gene: 226223633

Following gene: 226223635

Centisome position: 35.94

GC content: 38.21

Gene sequence:

>903_bases
TTGCTAAAAAAATTAATCACCACCGCAGTTTTGGCTATGCTTATTTTCACTTTAGCAGCCTGCGGAACAACCCTTGCTCC
TTATGACGCGAAAAAAGATTTAGGCGAACAAATCAATTATACAATCACAGGAATTGATGCTGGAGCAGGAATTATGCTTG
CAACACAAAATGCGATTAAAGATTACCATTTAGATGATGATAATTGGCAATTACAAACAAGTTCTACCGCGGCGATGACA
AGTACACTTCAAAAAGCGATGAAAGATAAGCGCCCGATTGTTGTGACTGGTTGGACCCCGCACTGGATGTTTACAAAATT
TGATTTGAAATTTTTGGATGATCCCAAAAATGTTTATGGTAATGCAGAAAACATCCACACCATTGTACGTAAAGGCTTAA
AAGAAGATAAACCTTCCGCTTACCAAGTGCTAGATAATTTCTTCTGGACTGCGGAAGATATGTCTGAAGTAATGCTTGAA
GTTAATGACGGTGTAGATCCAGAAGAAGCCGCTAAAAAATGGATTAAAAATAATCCAGAAAAAGTAGCAAAATGGACGGA
TGGCGTGGAAAAAGTAGATGGCGATGAAATCAAGTTAACTTATGTAGCTTGGGATTCTGAAATTGCCTCTACAAACGTTG
TCGCAGAAGCATTAAAACAAGTTGGCTACAAACCAACGATTCAAGCAATGGAAATTCAACCGATGTGGGCGTCCGTTGCT
ACGGATGCAGCTGATGGTATGGTTGCTGCATGGCTTCCAAATACTTCCGGGATCTACTACAAAGATTATAAAGGAAAATT
TGAAGATTTAGGACCAAACTTAAAAGGTGCTAAAATCGGTCTAGCAGTTCCAAAATACATGACAAACATTAATTCCATTG
AAGATTTAAAAACAAGCAAATAA

Upstream 100 bases:

>100_bases
TTTGTAGCTGGGATTGCGATTGTTATCGTAGCAATCATCCTAGACCGTCTGACACAAGCTTTCAATAAAAAAGCGAAATC
AGAATGAGGAGGAGAGTAGA

Downstream 100 bases:

>100_bases
ACGTTTAAAAAGGCATGAAGAAAATCAAGTGATGCTTGATAGTTTCTCCGTGCCTTTTTTTCTCTATAAGGGTAAAATAG
TAGTTGATTCATGAAATTGC

Product: glycine betaine ABC transporter (glycine betaine-binding protein)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MLKKLITTAVLAMLIFTLAACGTTLAPYDAKKDLGEQINYTITGIDAGAGIMLATQNAIKDYHLDDDNWQLQTSSTAAMT
STLQKAMKDKRPIVVTGWTPHWMFTKFDLKFLDDPKNVYGNAENIHTIVRKGLKEDKPSAYQVLDNFFWTAEDMSEVMLE
VNDGVDPEEAAKKWIKNNPEKVAKWTDGVEKVDGDEIKLTYVAWDSEIASTNVVAEALKQVGYKPTIQAMEIQPMWASVA
TDAADGMVAAWLPNTSGIYYKDYKGKFEDLGPNLKGAKIGLAVPKYMTNINSIEDLKTSK

Sequences:

>Translated_300_residues
MLKKLITTAVLAMLIFTLAACGTTLAPYDAKKDLGEQINYTITGIDAGAGIMLATQNAIKDYHLDDDNWQLQTSSTAAMT
STLQKAMKDKRPIVVTGWTPHWMFTKFDLKFLDDPKNVYGNAENIHTIVRKGLKEDKPSAYQVLDNFFWTAEDMSEVMLE
VNDGVDPEEAAKKWIKNNPEKVAKWTDGVEKVDGDEIKLTYVAWDSEIASTNVVAEALKQVGYKPTIQAMEIQPMWASVA
TDAADGMVAAWLPNTSGIYYKDYKGKFEDLGPNLKGAKIGLAVPKYMTNINSIEDLKTSK
>Mature_300_residues
MLKKLITTAVLAMLIFTLAACGTTLAPYDAKKDLGEQINYTITGIDAGAGIMLATQNAIKDYHLDDDNWQLQTSSTAAMT
STLQKAMKDKRPIVVTGWTPHWMFTKFDLKFLDDPKNVYGNAENIHTIVRKGLKEDKPSAYQVLDNFFWTAEDMSEVMLE
VNDGVDPEEAAKKWIKNNPEKVAKWTDGVEKVDGDEIKLTYVAWDSEIASTNVVAEALKQVGYKPTIQAMEIQPMWASVA
TDAADGMVAAWLPNTSGIYYKDYKGKFEDLGPNLKGAKIGLAVPKYMTNINSIEDLKTSK

Specific function: Involved in a multicomponent binding-protein-dependent transport system for glycine betaine [H]

COG id: COG2113

COG function: function code E; ABC-type proline/glycine betaine transport systems, periplasmic components

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 33290; Mature: 33290

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKLITTAVLAMLIFTLAACGTTLAPYDAKKDLGEQINYTITGIDAGAGIMLATQNAIK
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCEEEEEECCCCCEEEEEHHHHH
DYHLDDDNWQLQTSSTAAMTSTLQKAMKDKRPIVVTGWTPHWMFTKFDLKFLDDPKNVYG
CCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECEEECCCCHHHCC
NAENIHTIVRKGLKEDKPSAYQVLDNFFWTAEDMSEVMLEVNDGVDPEEAAKKWIKNNPE
CHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHH
KVAKWTDGVEKVDGDEIKLTYVAWDSEIASTNVVAEALKQVGYKPTIQAMEIQPMWASVA
HHHHHHCCHHHCCCCEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHH
TDAADGMVAAWLPNTSGIYYKDYKGKFEDLGPNLKGAKIGLAVPKYMTNINSIEDLKTSK
HHCCCCEEEEECCCCCCEEEECCCCCHHHCCCCCCCCEEEEEHHHHHHCCCHHHHHCCCC
>Mature Secondary Structure
MLKKLITTAVLAMLIFTLAACGTTLAPYDAKKDLGEQINYTITGIDAGAGIMLATQNAIK
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCEEEEEECCCCCEEEEEHHHHH
DYHLDDDNWQLQTSSTAAMTSTLQKAMKDKRPIVVTGWTPHWMFTKFDLKFLDDPKNVYG
CCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCEEEEEECEEECCCCHHHCC
NAENIHTIVRKGLKEDKPSAYQVLDNFFWTAEDMSEVMLEVNDGVDPEEAAKKWIKNNPE
CHHHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCHH
KVAKWTDGVEKVDGDEIKLTYVAWDSEIASTNVVAEALKQVGYKPTIQAMEIQPMWASVA
HHHHHHCCHHHCCCCEEEEEEEEECCHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHH
TDAADGMVAAWLPNTSGIYYKDYKGKFEDLGPNLKGAKIGLAVPKYMTNINSIEDLKTSK
HHCCCCEEEEECCCCCCEEEECCCCCHHHCCCCCCCCEEEEEHHHHHHCCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7622480; 8969502; 9384377 [H]