Definition | Listeria monocytogenes Clip81459, complete genome. |
---|---|
Accession | NC_012488 |
Length | 2,912,690 |
Click here to switch to the map view.
The map label for this gene is 226223571
Identifier: 226223571
GI number: 226223571
Start: 988327
End: 988560
Strand: Direct
Name: 226223571
Synonym: Lm4b_00973
Alternate gene names: NA
Gene position: 988327-988560 (Clockwise)
Preceding gene: 226223570
Following gene: 226223572
Centisome position: 33.93
GC content: 40.17
Gene sequence:
>234_bases GTGAAAAATAAAGTAGGAATTATTGCCGGAGCCGTGGGAGCTGTCGCTGGAGTTTTAGCTTGTGCAGTAGTATACGTGGT TAAAAAGCAACAGCCGCCTACCCCTTTTGATGAGGTAAATGATATTCGGACCCGTTACGCTGACAAAGAAATTTCTGAAA CAGAACTGGAAGAAAATAACATGATTTCAGAAGGTGGCGTTTCATCTCTTCAATATGAAGAAAAAGTCAAATAA
Upstream 100 bases:
>100_bases ATTATAATTCGAAACGAGTTTGAACTTTTCAAGCTCGTTTTTGTTTTACTTCTACTTTTTTAGGGAATAAAATAGTGGAT TTCAAGAGGAGGTTGATAGT
Downstream 100 bases:
>100_bases TGAGAATGCAGTTTGTATCTTGTGTTACGCGAGAACAAGCTGTTTTTTTATGTAGAAAACACTGCTTATTATAGTAGATT ATGTTATCCTGTAGTTAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MKNKVGIIAGAVGAVAGVLACAVVYVVKKQQPPTPFDEVNDIRTRYADKEISETELEENNMISEGGVSSLQYEEKVK
Sequences:
>Translated_77_residues MKNKVGIIAGAVGAVAGVLACAVVYVVKKQQPPTPFDEVNDIRTRYADKEISETELEENNMISEGGVSSLQYEEKVK >Mature_77_residues MKNKVGIIAGAVGAVAGVLACAVVYVVKKQQPPTPFDEVNDIRTRYADKEISETELEENNMISEGGVSSLQYEEKVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8357; Mature: 8357
Theoretical pI: Translated: 4.55; Mature: 4.55
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKVGIIAGAVGAVAGVLACAVVYVVKKQQPPTPFDEVNDIRTRYADKEISETELEENN CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHCCCC MISEGGVSSLQYEEKVK CCCCCCCCCCCHHHCCC >Mature Secondary Structure MKNKVGIIAGAVGAVAGVLACAVVYVVKKQQPPTPFDEVNDIRTRYADKEISETELEENN CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHCCCC MISEGGVSSLQYEEKVK CCCCCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA