Click here to switch to the map view.

The map label for this gene is srtA

Identifier: 226223548

GI number: 226223548

Start: 967369

End: 968037

Strand: Direct

Name: srtA

Synonym: Lm4b_00948

Alternate gene names: 226223548

Gene position: 967369-968037 (Clockwise)

Preceding gene: 226223547

Following gene: 226223549

Centisome position: 33.21

GC content: 34.98

Gene sequence:

>669_bases
ATGTTAAAGAAAACAATTGCAATAATTATTTTAATCATTGGGCTACTATTAATTTTTTCCCCATTCATCAAAAACGGCAT
TGTGAAATACATGAGTGGTCATGAAACAATCGAGCAATATAAAGCATCAGATATAAAGAAAAATAATGAAAAAGACGCTA
CATTTGATTTTGAAAGTGTTCAGCTACCCTCTATGACATCTGTTATTAAAGGAGCAGCAAATTACGACAAAGATGCAGTC
GTTGGTTCTATCGCAGTTCCATCTGTAGACGTTAACCTCTTAGTTTTCAAAGGAACAAATACAGCTAATTTACTGGCGGG
TGCAACAACCATGCGTTCTGATCAAGTCATGGGTAAAGGTAACTATCCGCTGGCAGGTCACCATATGCGTGATGAATCTA
TGTTGTTTGGTCCTATAATGAAAGTCAAAAAAGGCGACAAGATTTATCTAACAGATCTTGAGAATTTATACGAATACACT
GTTACGGAAACAAAAACGATTGATGAAACAGAAGTAAGTGTGATTGACGATACGAAAGACGCTAGAATTACACTTATTAC
ATGTGATAAACCAACTGAAACAACAAAACGGTTTGTCGCGGTTGGTGAACTAGAAAAAACGGAAAAGCTAACAAAAGAAC
TAGAGAATAAATATTTCCCTAGTAAATAA

Upstream 100 bases:

>100_bases
TTTTGTCACAGGTAGAGAAAATAGTTTTATCCAGACACTGATTTTCTTTGCTTCATAAGAAGAGCTACTATATAATGAAA
TAGTTACAAGGAGGAATTAT

Downstream 100 bases:

>100_bases
TGAGAAAAGACAGCGTATTTTCTAAGCTGTCTTTTTTTCTGGATAATTTCTCCTTTTATTATAAATGTTGTATCATATAA
AGGAGGTTTATTTTGAGAAA

Product: Sortase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MLKKTIAIIILIIGLLLIFSPFIKNGIVKYMSGHETIEQYKASDIKKNNEKDATFDFESVQLPSMTSVIKGAANYDKDAV
VGSIAVPSVDVNLLVFKGTNTANLLAGATTMRSDQVMGKGNYPLAGHHMRDESMLFGPIMKVKKGDKIYLTDLENLYEYT
VTETKTIDETEVSVIDDTKDARITLITCDKPTETTKRFVAVGELEKTEKLTKELENKYFPSK

Sequences:

>Translated_222_residues
MLKKTIAIIILIIGLLLIFSPFIKNGIVKYMSGHETIEQYKASDIKKNNEKDATFDFESVQLPSMTSVIKGAANYDKDAV
VGSIAVPSVDVNLLVFKGTNTANLLAGATTMRSDQVMGKGNYPLAGHHMRDESMLFGPIMKVKKGDKIYLTDLENLYEYT
VTETKTIDETEVSVIDDTKDARITLITCDKPTETTKRFVAVGELEKTEKLTKELENKYFPSK
>Mature_222_residues
MLKKTIAIIILIIGLLLIFSPFIKNGIVKYMSGHETIEQYKASDIKKNNEKDATFDFESVQLPSMTSVIKGAANYDKDAV
VGSIAVPSVDVNLLVFKGTNTANLLAGATTMRSDQVMGKGNYPLAGHHMRDESMLFGPIMKVKKGDKIYLTDLENLYEYT
VTETKTIDETEVSVIDDTKDARITLITCDKPTETTKRFVAVGELEKTEKLTKELENKYFPSK

Specific function: Unknown

COG id: COG3764

COG function: function code M; Sortase (surface protein transpeptidase)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C60 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005754 [H]

Pfam domain/function: PF04203 Sortase [H]

EC number: NA

Molecular weight: Translated: 24713; Mature: 24713

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKTIAIIILIIGLLLIFSPFIKNGIVKYMSGHETIEQYKASDIKKNNEKDATFDFESV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEECCCCC
QLPSMTSVIKGAANYDKDAVVGSIAVPSVDVNLLVFKGTNTANLLAGATTMRSDQVMGKG
CCCHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCHHHCCCHHCCCCCEECCC
NYPLAGHHMRDESMLFGPIMKVKKGDKIYLTDLENLYEYTVTETKTIDETEVSVIDDTKD
CCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCCCCCCCEEEEEECCCC
ARITLITCDKPTETTKRFVAVGELEKTEKLTKELENKYFPSK
CEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MLKKTIAIIILIIGLLLIFSPFIKNGIVKYMSGHETIEQYKASDIKKNNEKDATFDFESV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEECCCCC
QLPSMTSVIKGAANYDKDAVVGSIAVPSVDVNLLVFKGTNTANLLAGATTMRSDQVMGKG
CCCHHHHHHHCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCHHHCCCHHCCCCCEECCC
NYPLAGHHMRDESMLFGPIMKVKKGDKIYLTDLENLYEYTVTETKTIDETEVSVIDDTKD
CCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHCCCCCCCCCCEEEEEECCCC
ARITLITCDKPTETTKRFVAVGELEKTEKLTKELENKYFPSK
CEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]