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The map label for this gene is yurN [H]

Identifier: 226223478

GI number: 226223478

Start: 898953

End: 899831

Strand: Direct

Name: yurN [H]

Synonym: Lm4b_00876

Alternate gene names: 226223478

Gene position: 898953-899831 (Clockwise)

Preceding gene: 226223477

Following gene: 226223479

Centisome position: 30.86

GC content: 38.34

Gene sequence:

>879_bases
ATGAAGCGGCGAAATAACAAATTGGGCTGGTCATTTACCAGCCCGTATCTCATATTCACTGCGATATTTTTCTTAGTACC
GCTTGTTTGGTCGATTTGGTTATCTGTAACTGATTGGAACATGATGAGTCCGGAAATTAATTTTGTTGGCTTTGATAATT
TTATTAAAGCGTTTACTAGTCCAGCAGTTCAAGCAGCCTTTTTTGTTACTTATAAATTTTTGATTGTTTTTGTTCCTATG
GCGTTAATTATTTCGATGATTGTCGCGGTATTAGTGAACGGCTTGCCGAAATTTAAAGGACTTTATCTGGTTGCGTTTTT
CCTACCGTATTTGTCTTCAGGCGTTGTAACTTCGCTTATTGTGCAAGGGTTACTTTCATACAATAGTGCGCTGAATGTGT
TTTTACGCGGGCATTTTGGTTGGGATATCGATTGGCTCGGGACACCAATGTCGGCGCTCGTTATTATTTCACTGATGATA
GCTTGGAAAATGTCTGGTTACTATGCGCTCATTTTAATTTCTGGACTTGCTAGCATTAATCATGAAATTTATGAAGCTGC
AGCAATGGATGGTTCTGGTAGATTTAGAACATTTTGGAAAGTCACTGTTCCGATGCTATATCCAGCTTTATTTACCGTAA
TTGTTTTAGCGGTAGGCGTTAGTTTTGGGATTTTCACCGAAGTTTACCAATTGACTGGTGGTGGACCGAACTTTGCAACA
AATACATGGCAAATGGAAATTTTTAACCAAGCATTCGTTAACTTGAATTCTGGTTATGCTTCAGCGATTTCTCTAATGGC
TGCTACTGTAACATTTGCATCGATTGGTGTTATTAAGAAAATGCTTGAGAAATGGGGTCAAAGAAATGGTTGGACATAA

Upstream 100 bases:

>100_bases
TCATTGGTGAAGAAGCGTGGAATCCGATTGTACGCGGGGAGAAAAAACCTGCTAAAGCTTGGTCAGATATGAAGAAAGCG
GAGGACGGGGTGCTTCAAGA

Downstream 100 bases:

>100_bases
TAGTAAAGCGGGTAAAATTGTTCGCTATATACTGACAACATTACTTATGCTAGTCATGATTTATCCTTTTATTTATTTAG
TATTAAACTCATTTGCTGCT

Product: sugar ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MKRRNNKLGWSFTSPYLIFTAIFFLVPLVWSIWLSVTDWNMMSPEINFVGFDNFIKAFTSPAVQAAFFVTYKFLIVFVPM
ALIISMIVAVLVNGLPKFKGLYLVAFFLPYLSSGVVTSLIVQGLLSYNSALNVFLRGHFGWDIDWLGTPMSALVIISLMI
AWKMSGYYALILISGLASINHEIYEAAAMDGSGRFRTFWKVTVPMLYPALFTVIVLAVGVSFGIFTEVYQLTGGGPNFAT
NTWQMEIFNQAFVNLNSGYASAISLMAATVTFASIGVIKKMLEKWGQRNGWT

Sequences:

>Translated_292_residues
MKRRNNKLGWSFTSPYLIFTAIFFLVPLVWSIWLSVTDWNMMSPEINFVGFDNFIKAFTSPAVQAAFFVTYKFLIVFVPM
ALIISMIVAVLVNGLPKFKGLYLVAFFLPYLSSGVVTSLIVQGLLSYNSALNVFLRGHFGWDIDWLGTPMSALVIISLMI
AWKMSGYYALILISGLASINHEIYEAAAMDGSGRFRTFWKVTVPMLYPALFTVIVLAVGVSFGIFTEVYQLTGGGPNFAT
NTWQMEIFNQAFVNLNSGYASAISLMAATVTFASIGVIKKMLEKWGQRNGWT
>Mature_292_residues
MKRRNNKLGWSFTSPYLIFTAIFFLVPLVWSIWLSVTDWNMMSPEINFVGFDNFIKAFTSPAVQAAFFVTYKFLIVFVPM
ALIISMIVAVLVNGLPKFKGLYLVAFFLPYLSSGVVTSLIVQGLLSYNSALNVFLRGHFGWDIDWLGTPMSALVIISLMI
AWKMSGYYALILISGLASINHEIYEAAAMDGSGRFRTFWKVTVPMLYPALFTVIVLAVGVSFGIFTEVYQLTGGGPNFAT
NTWQMEIFNQAFVNLNSGYASAISLMAATVTFASIGVIKKMLEKWGQRNGWT

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=264, Percent_Identity=28.4090909090909, Blast_Score=98, Evalue=6e-22,
Organism=Escherichia coli, GI1790465, Length=195, Percent_Identity=29.2307692307692, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI1787570, Length=252, Percent_Identity=24.2063492063492, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32568; Mature: 32568

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRNNKLGWSFTSPYLIFTAIFFLVPLVWSIWLSVTDWNMMSPEINFVGFDNFIKAFTS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHCC
PAVQAAFFVTYKFLIVFVPMALIISMIVAVLVNGLPKFKGLYLVAFFLPYLSSGVVTSLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHH
VQGLLSYNSALNVFLRGHFGWDIDWLGTPMSALVIISLMIAWKMSGYYALILISGLASIN
HHHHHHHHHHHHHHEECCCCCCCHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
HEIYEAAAMDGSGRFRTFWKVTVPMLYPALFTVIVLAVGVSFGIFTEVYQLTGGGPNFAT
HHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NTWQMEIFNQAFVNLNSGYASAISLMAATVTFASIGVIKKMLEKWGQRNGWT
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKRRNNKLGWSFTSPYLIFTAIFFLVPLVWSIWLSVTDWNMMSPEINFVGFDNFIKAFTS
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHCC
PAVQAAFFVTYKFLIVFVPMALIISMIVAVLVNGLPKFKGLYLVAFFLPYLSSGVVTSLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHH
VQGLLSYNSALNVFLRGHFGWDIDWLGTPMSALVIISLMIAWKMSGYYALILISGLASIN
HHHHHHHHHHHHHHEECCCCCCCHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
HEIYEAAAMDGSGRFRTFWKVTVPMLYPALFTVIVLAVGVSFGIFTEVYQLTGGGPNFAT
HHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
NTWQMEIFNQAFVNLNSGYASAISLMAATVTFASIGVIKKMLEKWGQRNGWT
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]