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The map label for this gene is 226223449

Identifier: 226223449

GI number: 226223449

Start: 862189

End: 863100

Strand: Reverse

Name: 226223449

Synonym: Lm4b_00847

Alternate gene names: NA

Gene position: 863100-862189 (Counterclockwise)

Preceding gene: 226223454

Following gene: 226223448

Centisome position: 29.63

GC content: 36.4

Gene sequence:

>912_bases
ATGGAATTTCTACTTATTTTACTTCCAGTTTTTGGGATCTTCGCTATTGGGTTTATTGGACAAAAGACTTTAAAATTTGA
TATTCCTAACTTATCTAAACTCACGCTTTACTTAATGTCACCGTTTCTTGCATTTAATACTTTTTATACCAATGCGCTAA
CGATAGATTATGCATATTTGGCGATTTACATTTTTGCGCTTTGTCTGAGTTTGATTTTGCTTGTCAGTTTAATTAGTTTT
TTGCTTGGTTATAACTTGCAAGATCGTTGCGCGCTCATTTTGGCTAGTGCTTTTATGAATAATGGAAATTATGGAACACC
TGTTGTCTTGCTTGTTTTTGGGGCTGTTGGGCTTGATATTGCTGTTGTATTAATGGTGTTGCAGCAACTAGCTATGAGTA
CCATTGGGATTTATTTTGCCGCAAAAGGAAGTAAAGATGCAAATGGAATGAAAACGGTCATGAAACGGGTTGTTCGGATG
CCGATTGCTTACGGGGCTTTACTCGGGCTTACGCTTCAATTACTTCATGTTTCACTTCCATCCGCTTTAATGACTTGCGT
AAAACTTGTTGGCGACGCTGCTATTCCAACAATTATGATTGTCCTTGGAATGCAGTTGGCAGTTATTTCGTTTAGACGAA
TCGAACTTACAAAAGTAGGCATTGCATTAGTACTCAAATTACTCATTGCTCCAATCATTGCGTTTGGTTTAACGTTGATT
CTCCCTGTTGACGAAATGACAAAACAAATTATGATTTTACTTGCAGCTATGCCAACTGCAGCGAATACTACTTTAATGGC
TGTACAATTTGATACAAAACCAGATTTAGTTTCTAGTGCCACATTTATTAGTACAGTTTTAAGTATTATTACCTTACCCA
TTGTGCTCTATTTTCTTCATCCAGTTTTCTAA

Upstream 100 bases:

>100_bases
GATTAAGATAAATACTAAACTGGTAACATGTAAAAGTGTCTAACTGAAACTTCATTTTATGGTACAATAAGCTACAATAT
ACATAGAAAAGAGGGGCGCC

Downstream 100 bases:

>100_bases
GGCGGGCTCTAGCTCGTCTTTTTTGTATAGACCAATTATAAAACAAAACGTTTGCCTTGCTTACATTTAAGAAATATAAT
AGCTATACCAATTGAAAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MEFLLILLPVFGIFAIGFIGQKTLKFDIPNLSKLTLYLMSPFLAFNTFYTNALTIDYAYLAIYIFALCLSLILLVSLISF
LLGYNLQDRCALILASAFMNNGNYGTPVVLLVFGAVGLDIAVVLMVLQQLAMSTIGIYFAAKGSKDANGMKTVMKRVVRM
PIAYGALLGLTLQLLHVSLPSALMTCVKLVGDAAIPTIMIVLGMQLAVISFRRIELTKVGIALVLKLLIAPIIAFGLTLI
LPVDEMTKQIMILLAAMPTAANTTLMAVQFDTKPDLVSSATFISTVLSIITLPIVLYFLHPVF

Sequences:

>Translated_303_residues
MEFLLILLPVFGIFAIGFIGQKTLKFDIPNLSKLTLYLMSPFLAFNTFYTNALTIDYAYLAIYIFALCLSLILLVSLISF
LLGYNLQDRCALILASAFMNNGNYGTPVVLLVFGAVGLDIAVVLMVLQQLAMSTIGIYFAAKGSKDANGMKTVMKRVVRM
PIAYGALLGLTLQLLHVSLPSALMTCVKLVGDAAIPTIMIVLGMQLAVISFRRIELTKVGIALVLKLLIAPIIAFGLTLI
LPVDEMTKQIMILLAAMPTAANTTLMAVQFDTKPDLVSSATFISTVLSIITLPIVLYFLHPVF
>Mature_303_residues
MEFLLILLPVFGIFAIGFIGQKTLKFDIPNLSKLTLYLMSPFLAFNTFYTNALTIDYAYLAIYIFALCLSLILLVSLISF
LLGYNLQDRCALILASAFMNNGNYGTPVVLLVFGAVGLDIAVVLMVLQQLAMSTIGIYFAAKGSKDANGMKTVMKRVVRM
PIAYGALLGLTLQLLHVSLPSALMTCVKLVGDAAIPTIMIVLGMQLAVISFRRIELTKVGIALVLKLLIAPIIAFGLTLI
LPVDEMTKQIMILLAAMPTAANTTLMAVQFDTKPDLVSSATFISTVLSIITLPIVLYFLHPVF

Specific function: Unknown

COG id: COG0679

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the auxin efflux carrier (TC 2.A.69) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004776
- InterPro:   IPR014024 [H]

Pfam domain/function: PF03547 Mem_trans [H]

EC number: NA

Molecular weight: Translated: 32910; Mature: 32910

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFLLILLPVFGIFAIGFIGQKTLKFDIPNLSKLTLYLMSPFLAFNTFYTNALTIDYAYL
CHHHHHHHHHHHHHHHHHHCCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIYIFALCLSLILLVSLISFLLGYNLQDRCALILASAFMNNGNYGTPVVLLVFGAVGLDI
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
AVVLMVLQQLAMSTIGIYFAAKGSKDANGMKTVMKRVVRMPIAYGALLGLTLQLLHVSLP
HHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SALMTCVKLVGDAAIPTIMIVLGMQLAVISFRRIELTKVGIALVLKLLIAPIIAFGLTLI
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPVDEMTKQIMILLAAMPTAANTTLMAVQFDTKPDLVSSATFISTVLSIITLPIVLYFLH
CCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
PVF
CCC
>Mature Secondary Structure
MEFLLILLPVFGIFAIGFIGQKTLKFDIPNLSKLTLYLMSPFLAFNTFYTNALTIDYAYL
CHHHHHHHHHHHHHHHHHHCCHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIYIFALCLSLILLVSLISFLLGYNLQDRCALILASAFMNNGNYGTPVVLLVFGAVGLDI
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
AVVLMVLQQLAMSTIGIYFAAKGSKDANGMKTVMKRVVRMPIAYGALLGLTLQLLHVSLP
HHHHHHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SALMTCVKLVGDAAIPTIMIVLGMQLAVISFRRIELTKVGIALVLKLLIAPIIAFGLTLI
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LPVDEMTKQIMILLAAMPTAANTTLMAVQFDTKPDLVSSATFISTVLSIITLPIVLYFLH
CCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
PVF
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]