Definition Listeria monocytogenes Clip81459, complete genome.
Accession NC_012488
Length 2,912,690

Click here to switch to the map view.

The map label for this gene is 226223434

Identifier: 226223434

GI number: 226223434

Start: 842649

End: 844124

Strand: Direct

Name: 226223434

Synonym: Lm4b_00832b

Alternate gene names: NA

Gene position: 842649-844124 (Clockwise)

Preceding gene: 226223433

Following gene: 226223435

Centisome position: 28.93

GC content: 41.46

Gene sequence:

>1476_bases
ATGAGTCGAATCGACATTGCAGAACTCAATGGCTTTCTTCAAGGATTACGAAGCAGTAATGCTGAGGCTAAAAAGATGAT
ACGCGGAATTCAACAAGCAGCAAGCAAGTATGCGCAAGATAAAAGTTTAAAAGGGCAAGCAGTATCAGCTTCCCAAAGCT
ATTTTGCTTCCAGTTATCCCTCTATTGCACAAAGTATTTTAGAAGCTCTAGAAGAAAGTGAAGAACGTCTAGCACAATAC
ATACGCGAGTTTGGTAGCCAAGTCGACAGCTCGCCTTCCGCACGAATTGATGCGGAAATCCTTCAAGAAGCGATGGCGAA
AGTGGCGAGTTTGAAGCGAAAAGAAGAAGATTTACATCGCCAACTCACTGCACCGAATACGAAACCGGATATGCAACAAG
TCTACGTAGTCCAAGCAAGAAGTGCGCACACGCAATTACTGCAAGCTATCGAAAAAGAAGATATACTAGAGAGGTACATC
GCCTTTGAACAAAGTCACGCCCAGTTTTTTAGTGCGTTAACCGAACTCATTCACTCCACAGGACGAGCGGTGCAAGAGTT
GAAACAAAATGTGACCTTCCATGAGAAAACAGGCACCTATGCTGTACCTAAAAGCGTTCATGCATCGATTAGTTTGATGA
GAAAAGCGATGGATAAAGCACGCAAAGAAAACGCCAAAGATTCCTTCCCAGAAGCATTCGAAGACTATCAGTTATTCGCC
TATACTTATGTGAATGACAAAGGCGAAACCGTCACGATGTGGCTATTGGAACGGAATGGCAAACGTGCCAGTAATAAAGA
ACTCCAAGCTTTTCTAGAGGAGAACGGAGCCGAGTTAGACCCTATTCTGTACACAAATCTTTCCGGTGATGAACTAGAGC
GCAAAGTAAATGATGCATGGAAAGACGGCGTCAACTACTTAAATGGTCAAAAAGTAACCGGGTTTTCCGAGGCGACACTG
AGGTCCTCTGCTTACGTAGCTAGCGTGAAGGATGCGATGGATGACGCTGGACTAACCGATATGGCATTAGGATTAGGCTT
TGGTATTGCGGCGGCGAGGAATAAAAAAATAATAGCTAAGAAATCAGAAAAAGTAGAAGTTGATCTTGGAAGATATTCTG
TAGCAACCTTAAATAGAGATCAAGCACGATTAGTGGTTGAACATCTTTTAGAAAGAGGAGAAATAAGCTTAAAAGATTTG
GGTGATATAATACCAAAAGGAACACCAAACACTTTTAAAACTACAGATACCTTGAAGAATGGTGCTAAGTATGAATTTCA
ATTAGCTGATGGACAAAAAGCGATAATTAGGTGGCATGAACCAGACCCTATTGCAGCTGCTAAATTTCCTGGTTCAGCTT
CTGGTTCAAGATGGACTGCTCAAATTAAGATAGGAAGTAAACAAGTAACAATAAATAAAGGATGGACAAAAAAGCAAAAC
TCAAATGAAGTGCATATTCCAATAAAAGGAAGGTAA

Upstream 100 bases:

>100_bases
CGGAAAAACGTGTTCATTTGGAAGAAGAAGCGCGGACTACTAGAGCAGAAATGCACGATATAGAGACCAAACAAGCCTCC
TTGCGAAAGGAGTGGAACCA

Downstream 100 bases:

>100_bases
TAATATGAAAAAAATTATGAAAAAAGATGATTATTCTAAAATGCCATGGGTATCAGCGGAGGATTTATATCTTTTATTTG
AACAAGCACTCAAGGACTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 491; Mature: 490

Protein sequence:

>491_residues
MSRIDIAELNGFLQGLRSSNAEAKKMIRGIQQAASKYAQDKSLKGQAVSASQSYFASSYPSIAQSILEALEESEERLAQY
IREFGSQVDSSPSARIDAEILQEAMAKVASLKRKEEDLHRQLTAPNTKPDMQQVYVVQARSAHTQLLQAIEKEDILERYI
AFEQSHAQFFSALTELIHSTGRAVQELKQNVTFHEKTGTYAVPKSVHASISLMRKAMDKARKENAKDSFPEAFEDYQLFA
YTYVNDKGETVTMWLLERNGKRASNKELQAFLEENGAELDPILYTNLSGDELERKVNDAWKDGVNYLNGQKVTGFSEATL
RSSAYVASVKDAMDDAGLTDMALGLGFGIAAARNKKIIAKKSEKVEVDLGRYSVATLNRDQARLVVEHLLERGEISLKDL
GDIIPKGTPNTFKTTDTLKNGAKYEFQLADGQKAIIRWHEPDPIAAAKFPGSASGSRWTAQIKIGSKQVTINKGWTKKQN
SNEVHIPIKGR

Sequences:

>Translated_491_residues
MSRIDIAELNGFLQGLRSSNAEAKKMIRGIQQAASKYAQDKSLKGQAVSASQSYFASSYPSIAQSILEALEESEERLAQY
IREFGSQVDSSPSARIDAEILQEAMAKVASLKRKEEDLHRQLTAPNTKPDMQQVYVVQARSAHTQLLQAIEKEDILERYI
AFEQSHAQFFSALTELIHSTGRAVQELKQNVTFHEKTGTYAVPKSVHASISLMRKAMDKARKENAKDSFPEAFEDYQLFA
YTYVNDKGETVTMWLLERNGKRASNKELQAFLEENGAELDPILYTNLSGDELERKVNDAWKDGVNYLNGQKVTGFSEATL
RSSAYVASVKDAMDDAGLTDMALGLGFGIAAARNKKIIAKKSEKVEVDLGRYSVATLNRDQARLVVEHLLERGEISLKDL
GDIIPKGTPNTFKTTDTLKNGAKYEFQLADGQKAIIRWHEPDPIAAAKFPGSASGSRWTAQIKIGSKQVTINKGWTKKQN
SNEVHIPIKGR
>Mature_490_residues
SRIDIAELNGFLQGLRSSNAEAKKMIRGIQQAASKYAQDKSLKGQAVSASQSYFASSYPSIAQSILEALEESEERLAQYI
REFGSQVDSSPSARIDAEILQEAMAKVASLKRKEEDLHRQLTAPNTKPDMQQVYVVQARSAHTQLLQAIEKEDILERYIA
FEQSHAQFFSALTELIHSTGRAVQELKQNVTFHEKTGTYAVPKSVHASISLMRKAMDKARKENAKDSFPEAFEDYQLFAY
TYVNDKGETVTMWLLERNGKRASNKELQAFLEENGAELDPILYTNLSGDELERKVNDAWKDGVNYLNGQKVTGFSEATLR
SSAYVASVKDAMDDAGLTDMALGLGFGIAAARNKKIIAKKSEKVEVDLGRYSVATLNRDQARLVVEHLLERGEISLKDLG
DIIPKGTPNTFKTTDTLKNGAKYEFQLADGQKAIIRWHEPDPIAAAKFPGSASGSRWTAQIKIGSKQVTINKGWTKKQNS
NEVHIPIKGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54588; Mature: 54457

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRIDIAELNGFLQGLRSSNAEAKKMIRGIQQAASKYAQDKSLKGQAVSASQSYFASSYP
CCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCH
SIAQSILEALEESEERLAQYIREFGSQVDSSPSARIDAEILQEAMAKVASLKRKEEDLHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QLTAPNTKPDMQQVYVVQARSAHTQLLQAIEKEDILERYIAFEQSHAQFFSALTELIHST
HHCCCCCCCCHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRAVQELKQNVTFHEKTGTYAVPKSVHASISLMRKAMDKARKENAKDSFPEAFEDYQLFA
HHHHHHHHHCCCEEECCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCEEEE
YTYVNDKGETVTMWLLERNGKRASNKELQAFLEENGAELDPILYTNLSGDELERKVNDAW
EEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHH
KDGVNYLNGQKVTGFSEATLRSSAYVASVKDAMDDAGLTDMALGLGFGIAAARNKKIIAK
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEC
KSEKVEVDLGRYSVATLNRDQARLVVEHLLERGEISLKDLGDIIPKGTPNTFKTTDTLKN
CCCCEEEECCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHCC
GAKYEFQLADGQKAIIRWHEPDPIAAAKFPGSASGSRWTAQIKIGSKQVTINKGWTKKQN
CCCEEEEECCCCEEEEEECCCCCCCEECCCCCCCCCEEEEEEEECCEEEEEECCCCCCCC
SNEVHIPIKGR
CCEEEEEECCC
>Mature Secondary Structure 
SRIDIAELNGFLQGLRSSNAEAKKMIRGIQQAASKYAQDKSLKGQAVSASQSYFASSYP
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCH
SIAQSILEALEESEERLAQYIREFGSQVDSSPSARIDAEILQEAMAKVASLKRKEEDLHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
QLTAPNTKPDMQQVYVVQARSAHTQLLQAIEKEDILERYIAFEQSHAQFFSALTELIHST
HHCCCCCCCCHHHEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRAVQELKQNVTFHEKTGTYAVPKSVHASISLMRKAMDKARKENAKDSFPEAFEDYQLFA
HHHHHHHHHCCCEEECCCCEECCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCEEEE
YTYVNDKGETVTMWLLERNGKRASNKELQAFLEENGAELDPILYTNLSGDELERKVNDAW
EEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHH
KDGVNYLNGQKVTGFSEATLRSSAYVASVKDAMDDAGLTDMALGLGFGIAAARNKKIIAK
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEC
KSEKVEVDLGRYSVATLNRDQARLVVEHLLERGEISLKDLGDIIPKGTPNTFKTTDTLKN
CCCCEEEECCCEEEEECCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCCCCCCHHHHCC
GAKYEFQLADGQKAIIRWHEPDPIAAAKFPGSASGSRWTAQIKIGSKQVTINKGWTKKQN
CCCEEEEECCCCEEEEEECCCCCCCEECCCCCCCCCEEEEEEEECCEEEEEECCCCCCCC
SNEVHIPIKGR
CCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA