Definition | Listeria monocytogenes Clip81459, complete genome. |
---|---|
Accession | NC_012488 |
Length | 2,912,690 |
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The map label for this gene is mhqA [H]
Identifier: 226223377
GI number: 226223377
Start: 784614
End: 785573
Strand: Direct
Name: mhqA [H]
Synonym: Lm4b_00775
Alternate gene names: 226223377
Gene position: 784614-785573 (Clockwise)
Preceding gene: 226223376
Following gene: 226223378
Centisome position: 26.94
GC content: 40.73
Gene sequence:
>960_bases ATGATTAAAGATTTAAAAGGAATTCACCACGTAACAGCAATGACAAGTAGTGCGGAGAAAAATTATGCGTTTTTTACAGA AGTTTTAGGAATGCGTTTAGTGAAAAAAACCGTCAACCAAGACGATATTCATACGTATCATTTGTTTTTCGCCGATGACA AAGGTTCAGCGGGAACGGATATGACATTTTTTGACTTTCCAAATTTACCAAAAGGACGTCACGGCACAGACAGTATTTCT CGCGTAGCTTTCCGAGTACCTAGTGATGCGGCGCTTGAATACTGGCTTGATCGTTTTGAACAATTAGAAGTTCCTCATAG TGATATCAAAACTCTATTTGGCAAAAAATATCTGACATTCCAAGATTTTGACGACCAACAATTACAACTGATTTCAGATG AAAATAACGAAGGGGTAGCAGCTGGAACTCCATGGAAAAACGGACCAGTCCCAGAAAAATATGCAATTTATGGCTTAGGA CCAGTCTTTTTAACGGTTGTTTCGCTCAAAAATATGGATGCGATTTTGCAAACGATTTTTGGCTTTAGAAAAGTGACAGA AGAAGACGGACTTCATTTATACGAGGTTGGCGAAGGTGGTAATGGGGCGCAAGTGATTGTCGAAGAACGTACCGATATTC CAGCTGCAATGCAAGGCTACGGTGGCGTTCACCATGTGGCTTTTCGAGTAGAAGACCACGAAGAATTGCAAAAATGGATT GACCGCATGAATACAATCGAAGCACCCAACTCTGGCTATGTAAACCGCTTCTACTTTGAATCATTGTATGTACCCGTTTC AGAACGAATTTTGTTTGAATTCGCGACAGATGGTCCGGGCTTTGCAAGTGATGAACCATACGAAACACTCGGTGAAAAAT TAGCCTTGCCTCCATTTTTAGAACCAAAACGCGCAGAAATTGAAAAAATGGTACGTCCGATTAATACGAAACGGAGCTGA
Upstream 100 bases:
>100_bases TTGACGAACCGCTTGAAACAATGGGCGACAACTTAGCCTTACCAAGCTTTTTAGAAGAAAAAAGAACAGAAATTGAAACT TATTTTGGAGGAGATTTATC
Downstream 100 bases:
>100_bases TAAACGATGGAACTCATTTATATTCCAGGGAAAAATAAGGATTTAGCCCCACTATTACTACTTCACGGGACAGGCGGCGA TGAAAAGTCGCTTGTCGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MIKDLKGIHHVTAMTSSAEKNYAFFTEVLGMRLVKKTVNQDDIHTYHLFFADDKGSAGTDMTFFDFPNLPKGRHGTDSIS RVAFRVPSDAALEYWLDRFEQLEVPHSDIKTLFGKKYLTFQDFDDQQLQLISDENNEGVAAGTPWKNGPVPEKYAIYGLG PVFLTVVSLKNMDAILQTIFGFRKVTEEDGLHLYEVGEGGNGAQVIVEERTDIPAAMQGYGGVHHVAFRVEDHEELQKWI DRMNTIEAPNSGYVNRFYFESLYVPVSERILFEFATDGPGFASDEPYETLGEKLALPPFLEPKRAEIEKMVRPINTKRS
Sequences:
>Translated_319_residues MIKDLKGIHHVTAMTSSAEKNYAFFTEVLGMRLVKKTVNQDDIHTYHLFFADDKGSAGTDMTFFDFPNLPKGRHGTDSIS RVAFRVPSDAALEYWLDRFEQLEVPHSDIKTLFGKKYLTFQDFDDQQLQLISDENNEGVAAGTPWKNGPVPEKYAIYGLG PVFLTVVSLKNMDAILQTIFGFRKVTEEDGLHLYEVGEGGNGAQVIVEERTDIPAAMQGYGGVHHVAFRVEDHEELQKWI DRMNTIEAPNSGYVNRFYFESLYVPVSERILFEFATDGPGFASDEPYETLGEKLALPPFLEPKRAEIEKMVRPINTKRS >Mature_319_residues MIKDLKGIHHVTAMTSSAEKNYAFFTEVLGMRLVKKTVNQDDIHTYHLFFADDKGSAGTDMTFFDFPNLPKGRHGTDSIS RVAFRVPSDAALEYWLDRFEQLEVPHSDIKTLFGKKYLTFQDFDDQQLQLISDENNEGVAAGTPWKNGPVPEKYAIYGLG PVFLTVVSLKNMDAILQTIFGFRKVTEEDGLHLYEVGEGGNGAQVIVEERTDIPAAMQGYGGVHHVAFRVEDHEELQKWI DRMNTIEAPNSGYVNRFYFESLYVPVSERILFEFATDGPGFASDEPYETLGEKLALPPFLEPKRAEIEKMVRPINTKRS
Specific function: Putative ring-cleavage dioxygenase that may contribute to the degradation of aromatic compounds (Potential) [H]
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the extradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: NA
Molecular weight: Translated: 36114; Mature: 36114
Theoretical pI: Translated: 4.86; Mature: 4.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKDLKGIHHVTAMTSSAEKNYAFFTEVLGMRLVKKTVNQDDIHTYHLFFADDKGSAGTD CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCC MTFFDFPNLPKGRHGTDSISRVAFRVPSDAALEYWLDRFEQLEVPHSDIKTLFGKKYLTF CEEECCCCCCCCCCCCHHHHHHEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEE QDFDDQQLQLISDENNEGVAAGTPWKNGPVPEKYAIYGLGPVFLTVVSLKNMDAILQTIF ECCCCCCEEEEECCCCCCEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH GFRKVTEEDGLHLYEVGEGGNGAQVIVEERTDIPAAMQGYGGVHHVAFRVEDHEELQKWI HHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCHHHHCCCCEEEEEEEECCHHHHHHHH DRMNTIEAPNSGYVNRFYFESLYVPVSERILFEFATDGPGFASDEPYETLGEKLALPPFL HHHHCCCCCCCCCCCEEEHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCC EPKRAEIEKMVRPINTKRS CCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MIKDLKGIHHVTAMTSSAEKNYAFFTEVLGMRLVKKTVNQDDIHTYHLFFADDKGSAGTD CCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCC MTFFDFPNLPKGRHGTDSISRVAFRVPSDAALEYWLDRFEQLEVPHSDIKTLFGKKYLTF CEEECCCCCCCCCCCCHHHHHHEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCEEEE QDFDDQQLQLISDENNEGVAAGTPWKNGPVPEKYAIYGLGPVFLTVVSLKNMDAILQTIF ECCCCCCEEEEECCCCCCEECCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHH GFRKVTEEDGLHLYEVGEGGNGAQVIVEERTDIPAAMQGYGGVHHVAFRVEDHEELQKWI HHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCHHHHCCCCEEEEEEEECCHHHHHHHH DRMNTIEAPNSGYVNRFYFESLYVPVSERILFEFATDGPGFASDEPYETLGEKLALPPFL HHHHCCCCCCCCCCCEEEHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCCCCC EPKRAEIEKMVRPINTKRS CCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]