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The map label for this gene is fnr [C]

Identifier: 226223371

GI number: 226223371

Start: 779442

End: 780122

Strand: Direct

Name: fnr [C]

Synonym: Lm4b_00769

Alternate gene names: 226223371

Gene position: 779442-780122 (Clockwise)

Preceding gene: 226223370

Following gene: 226223372

Centisome position: 26.76

GC content: 32.75

Gene sequence:

>681_bases
ATGAACATTCGAACTGAATTACAAAATAGCCAATTATGCGAAGGATTAACAGAAGCTCAATTAAACGAACTGATGAATAA
AATTACGGTTAAAGAAAAGCACTATAAAAATAATGAGATTTTATTTTATACAGACGAAGTAACGAAAGTATATATTTTAG
TTAAAGGAAATGCGGCCATTGCTAAAAATACAAGTAGCGGTAAGCGGATTCTAGGTAAAAATGTCACAGAACCTGGAGAA
CTGGCTGGGGAGATTTATTATTTCTCGCATCGCAATCCATTTTGGGACTATGTAATCGTGCTTGAACCGACAACAGTATT
AGAAATTAGCAGCATCGACCAAGAAACTCTTCAAACCTTAGATTTAGCTTTACAAAACCAACTATTAGTCAATTTATTAA
AAAGTGTTACTAGAAAATTTGAATATATAGGTGAAAAGGTACGAATGGTTTCAGAAGACTCTGTTCGTGCAAAAATAAGC
AATTATTTATTTGGCATCCAAGACGATGATGGCAGTATCGAATTAACAGAAACAAGAGAAGAAATTGCCGACTATCTTGA
TATTACAAGACCTTCACTTTCGAGAGAACTTGGCAGAATGCAAAAAGAAAATATTATTCGTATCGAAGGAAGTAGCGTTA
TTATTTTAGATGCGATTATATTTGATACTTTTATTGAGTAA

Upstream 100 bases:

>100_bases
AATTTAGCAGAATTTTTTTGATGCAGTCGTAATTGCTATTTAAAAGAAAGTGGTCTATGCTTATCGTTAAAAGTAACTTT
CATTTTAGAGGAGAAGCAAA

Downstream 100 bases:

>100_bases
CTAGTAACCAGCGTTACATCTTTTCGTATGCGGTAATGGTAAGCTATTCGTATTAAAAGAATGAATACGGAGGAGATTAG
ATGTTATTAACTAGAAACGA

Product: transcription regulator Crp/Fnr family

Products: NA

Alternate protein names: Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; Transcription Regulator Crp/Fnr Family; Transcriptional Regulator Crp Family

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MNIRTELQNSQLCEGLTEAQLNELMNKITVKEKHYKNNEILFYTDEVTKVYILVKGNAAIAKNTSSGKRILGKNVTEPGE
LAGEIYYFSHRNPFWDYVIVLEPTTVLEISSIDQETLQTLDLALQNQLLVNLLKSVTRKFEYIGEKVRMVSEDSVRAKIS
NYLFGIQDDDGSIELTETREEIADYLDITRPSLSRELGRMQKENIIRIEGSSVIILDAIIFDTFIE

Sequences:

>Translated_226_residues
MNIRTELQNSQLCEGLTEAQLNELMNKITVKEKHYKNNEILFYTDEVTKVYILVKGNAAIAKNTSSGKRILGKNVTEPGE
LAGEIYYFSHRNPFWDYVIVLEPTTVLEISSIDQETLQTLDLALQNQLLVNLLKSVTRKFEYIGEKVRMVSEDSVRAKIS
NYLFGIQDDDGSIELTETREEIADYLDITRPSLSRELGRMQKENIIRIEGSSVIILDAIIFDTFIE
>Mature_226_residues
MNIRTELQNSQLCEGLTEAQLNELMNKITVKEKHYKNNEILFYTDEVTKVYILVKGNAAIAKNTSSGKRILGKNVTEPGE
LAGEIYYFSHRNPFWDYVIVLEPTTVLEISSIDQETLQTLDLALQNQLLVNLLKSVTRKFEYIGEKVRMVSEDSVRAKIS
NYLFGIQDDDGSIELTETREEIADYLDITRPSLSRELGRMQKENIIRIEGSSVIILDAIIFDTFIE

Specific function: Global Transcription Factor That Controls The Expression Of Over 100 Target Genes In Response To Anoxia. It Facilitates The Adaptation To Anaerobic Growth Conditions By Regulating The Expression Of Gene Products That Are Involved In Anaerobic Energy Metab

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25861; Mature: 25861

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRTELQNSQLCEGLTEAQLNELMNKITVKEKHYKNNEILFYTDEVTKVYILVKGNAAI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEECCEEE
AKNTSSGKRILGKNVTEPGELAGEIYYFSHRNPFWDYVIVLEPTTVLEISSIDQETLQTL
EECCCCCCEECCCCCCCHHHHCEEEEEEECCCCCEEEEEEECCCEEEEECCCCHHHHHHH
DLALQNQLLVNLLKSVTRKFEYIGEKVRMVSEDSVRAKISNYLFGIQDDDGSIELTETRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCCCEEEHHHHH
EIADYLDITRPSLSRELGRMQKENIIRIEGSSVIILDAIIFDTFIE
HHHHHHHCCCHHHHHHHHHHHHCCEEEECCCCEEEEHHHHHHHHCC
>Mature Secondary Structure
MNIRTELQNSQLCEGLTEAQLNELMNKITVKEKHYKNNEILFYTDEVTKVYILVKGNAAI
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEECCEEE
AKNTSSGKRILGKNVTEPGELAGEIYYFSHRNPFWDYVIVLEPTTVLEISSIDQETLQTL
EECCCCCCEECCCCCCCHHHHCEEEEEEECCCCCEEEEEEECCCEEEEECCCCHHHHHHH
DLALQNQLLVNLLKSVTRKFEYIGEKVRMVSEDSVRAKISNYLFGIQDDDGSIELTETRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEEECCCCCEEEHHHHH
EIADYLDITRPSLSRELGRMQKENIIRIEGSSVIILDAIIFDTFIE
HHHHHHHCCCHHHHHHHHHHHHCCEEEECCCCEEEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA