Definition | Listeria monocytogenes Clip81459, complete genome. |
---|---|
Accession | NC_012488 |
Length | 2,912,690 |
Click here to switch to the map view.
The map label for this gene is fliH
Identifier: 226223346
GI number: 226223346
Start: 755014
End: 755706
Strand: Direct
Name: fliH
Synonym: Lm4b_00743
Alternate gene names: NA
Gene position: 755014-755706 (Clockwise)
Preceding gene: 226223345
Following gene: 226223347
Centisome position: 25.92
GC content: 39.25
Gene sequence:
>693_bases ATGTCCTTATCTAATCCGCGAATCCCAAAAGGTAAAGTCACTTTATCCGACGTGAAAATGGAACTGTTTTATTTGGATGA TATAGAAGAAACAGAAGAAGTCGAGTCACCCTACTCGAAAGAACTTGAACAACTAGAAAGTCATCAAAAAGAACTGGAAA AACACCTATCTGCCATCGAAATCGAACAGCAAAAATTAGCTAACGAAAAAGCAGCACTTCAAGCTGAACGCCAAGCCATT GAAGAATTAAAACGCGAAGCTGAAACAGAAATCGAAGCAAACAAACAAGCTTTTGAAAAAGAAAAAACACAAATGTATCT AACTATCACCGATTTCCTTTGGGATGAAAGTATCGATCTTGCAGAAAGAATCGTCCACCAAGCAATCGACACGCGCCAAA TCGAAGTCTTACCAATGCTAACTGAAGTCATTCAAAAACTCCCAGTTGCTTTCGACAAACTAAACGTCACCACCCATCCA GAGACCTTAAAAGCTCTAAAAGAAGAAAACACAGGCACAAAATACGACTGGCTTTTAGAAAATATCCATTGGAACTTCGA TATGCGACTCGATTACGGCGAATTTACTGTAGAAGAAGAAAAGGAATACTTCGACTACCGCATCACCGAAATTTTCCAAA CACTTCATAAACAAAACGCCGAACGGAAAATTCTAGGAGGCGATAAACCGTGA
Upstream 100 bases:
>100_bases ATCAGACTTTCTGACGTCGAGCAAGCCCAACAAGATATCGCCAATGTCGTTAAAAATCTGGAAAAAGATGGCAAAATAGT TATCCAACGGGGGGAACAGG
Downstream 100 bases:
>100_bases ACTGGTCGCCAAAAACCAAAGCTTGGCAAGAACTAAAAAACACCGTTCCATACATCCAAAAAGGAAAAATTCACACAGTC CAAGAACAAGTCTATATTTC
Product: flagellar assembly protein H
Products: NA
Alternate protein names: Flagellar Assembly Protein FliH
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MSLSNPRIPKGKVTLSDVKMELFYLDDIEETEEVESPYSKELEQLESHQKELEKHLSAIEIEQQKLANEKAALQAERQAI EELKREAETEIEANKQAFEKEKTQMYLTITDFLWDESIDLAERIVHQAIDTRQIEVLPMLTEVIQKLPVAFDKLNVTTHP ETLKALKEENTGTKYDWLLENIHWNFDMRLDYGEFTVEEEKEYFDYRITEIFQTLHKQNAERKILGGDKP
Sequences:
>Translated_230_residues MSLSNPRIPKGKVTLSDVKMELFYLDDIEETEEVESPYSKELEQLESHQKELEKHLSAIEIEQQKLANEKAALQAERQAI EELKREAETEIEANKQAFEKEKTQMYLTITDFLWDESIDLAERIVHQAIDTRQIEVLPMLTEVIQKLPVAFDKLNVTTHP ETLKALKEENTGTKYDWLLENIHWNFDMRLDYGEFTVEEEKEYFDYRITEIFQTLHKQNAERKILGGDKP >Mature_229_residues SLSNPRIPKGKVTLSDVKMELFYLDDIEETEEVESPYSKELEQLESHQKELEKHLSAIEIEQQKLANEKAALQAERQAIE ELKREAETEIEANKQAFEKEKTQMYLTITDFLWDESIDLAERIVHQAIDTRQIEVLPMLTEVIQKLPVAFDKLNVTTHPE TLKALKEENTGTKYDWLLENIHWNFDMRLDYGEFTVEEEKEYFDYRITEIFQTLHKQNAERKILGGDKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27104; Mature: 26973
Theoretical pI: Translated: 4.40; Mature: 4.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSNPRIPKGKVTLSDVKMELFYLDDIEETEEVESPYSKELEQLESHQKELEKHLSAIE CCCCCCCCCCCCEEHHHHEEEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH IEQQKLANEKAALQAERQAIEELKREAETEIEANKQAFEKEKTQMYLTITDFLWDESIDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHCCCHHH AERIVHQAIDTRQIEVLPMLTEVIQKLPVAFDKLNVTTHPETLKALKEENTGTKYDWLLE HHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHH NIHWNFDMRLDYGEFTVEEEKEYFDYRITEIFQTLHKQNAERKILGGDKP HHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SLSNPRIPKGKVTLSDVKMELFYLDDIEETEEVESPYSKELEQLESHQKELEKHLSAIE CCCCCCCCCCCEEHHHHEEEEEEECCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH IEQQKLANEKAALQAERQAIEELKREAETEIEANKQAFEKEKTQMYLTITDFLWDESIDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHHCCCHHH AERIVHQAIDTRQIEVLPMLTEVIQKLPVAFDKLNVTTHPETLKALKEENTGTKYDWLLE HHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHH NIHWNFDMRLDYGEFTVEEEKEYFDYRITEIFQTLHKQNAERKILGGDKP HHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA