| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226223333
Identifier: 226223333
GI number: 226223333
Start: 744480
End: 745646
Strand: Direct
Name: 226223333
Synonym: Lm4b_00730
Alternate gene names: NA
Gene position: 744480-745646 (Clockwise)
Preceding gene: 226223332
Following gene: 226223334
Centisome position: 25.56
GC content: 35.99
Gene sequence:
>1167_bases ATGAAAATAGATGGCATTCAAGAATCTGCAGAAAATCGTAATCAACTAGAACGGGAACTCATTAAACAAAATCCAGTTGT AAAAGAAGGTACGATAAAAGCACAAATGAATACAGAAGTAGCCGTACCGAAAACACCGCCAGTATCATTCTCTTTTAAAG AATTAAGCAGCTTACAACTAAACGGAACAAGCGCAGCAAGTTTAGAATTATATATGAAATTAATGATGAACAATGCTAAA AAAGCGAATGATTTAATCTTTTACGTGATGCGGGCGGGAATCAAAAATCCAACTGATTCTACTAAATGGCAAACAGTCAG AAGCGAGATTAGTAGCCAATTAAGTACAATTCTAATGAAACAACATAATTTTGAAGCGTACTTTTCTGAAAATCCCGCGA ATCAAAAATTATTTTTAGCCAATCAAAAAATTATGAACGAAATATCCTTTTTGCTAAAAATGTTGCCAACCTTAACTTTT GAAACAACAGGAAAATACGACTTCTTGCGCATGATGCAAATAGCTTCTGGCAATATGGAGACTGGAATCCAAATGATGCG CGAATTCCAGGGGCATATCGAACATGCGACAAGACTAGACCCGATTGTTGACGCCAGACAAGAAACGAACTGGATGATTA AAGTGTTACGCGAATTTGGCAATATGTTCCAATCGCGCCACTTATTACCATATGAATTACAGGCAGAAAACATCAATATT TGGAAGTTGAGTAGCGAATACTTAAAACTAATGAACCAACTTTTACCGCAAATTGGCGCATTTCCAAATGGGAATATCAA AATTTTTCACCAACAAGCGACCAAGCCATTAACGGAACTTTTCCAAGAACTGCAACGCTTGGCAGACGGACAAATGACGC AAGGTGGGATCGCCGTTATTTTAGACCGGATGCAAGGCCAACTTACACGACTTGCACAACTGTTTCAAAAAATGGAAATC GAAGCAGGTTTCACCGATACAGAACGAATTTTAGGTAGTGTGGACGCCGAATTCGCTAGTGATATGACAAAAATGATGCT ACTCGCACAACAAGAAATGTCATTTTTTGATTTATTAGTAAAAGATTTCCGAAGTGTTTCTAAACAACCAATATTTTTCA TGATAGTTGCTATATTTATTATTTTATTATTAATTATTTTATTTTAA
Upstream 100 bases:
>100_bases AGCAGTATCCCGTTTTGGATTCCGGCGCTCATGATTATTGGCGTTATTATTTTTTCGGGTAATAGAGCAATGAAATAAAA GCAGAAGTGAGGTGGACGGA
Downstream 100 bases:
>100_bases AAAAGATATTTTTTGAAAAAATATATACTTTTTCAGGTTGTTTCAGTATAATTAAATAGAAAAATAAGGTTTAGAAAGCG AAAATGAGTTTTTCGGGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MKIDGIQESAENRNQLERELIKQNPVVKEGTIKAQMNTEVAVPKTPPVSFSFKELSSLQLNGTSAASLELYMKLMMNNAK KANDLIFYVMRAGIKNPTDSTKWQTVRSEISSQLSTILMKQHNFEAYFSENPANQKLFLANQKIMNEISFLLKMLPTLTF ETTGKYDFLRMMQIASGNMETGIQMMREFQGHIEHATRLDPIVDARQETNWMIKVLREFGNMFQSRHLLPYELQAENINI WKLSSEYLKLMNQLLPQIGAFPNGNIKIFHQQATKPLTELFQELQRLADGQMTQGGIAVILDRMQGQLTRLAQLFQKMEI EAGFTDTERILGSVDAEFASDMTKMMLLAQQEMSFFDLLVKDFRSVSKQPIFFMIVAIFIILLLIILF
Sequences:
>Translated_388_residues MKIDGIQESAENRNQLERELIKQNPVVKEGTIKAQMNTEVAVPKTPPVSFSFKELSSLQLNGTSAASLELYMKLMMNNAK KANDLIFYVMRAGIKNPTDSTKWQTVRSEISSQLSTILMKQHNFEAYFSENPANQKLFLANQKIMNEISFLLKMLPTLTF ETTGKYDFLRMMQIASGNMETGIQMMREFQGHIEHATRLDPIVDARQETNWMIKVLREFGNMFQSRHLLPYELQAENINI WKLSSEYLKLMNQLLPQIGAFPNGNIKIFHQQATKPLTELFQELQRLADGQMTQGGIAVILDRMQGQLTRLAQLFQKMEI EAGFTDTERILGSVDAEFASDMTKMMLLAQQEMSFFDLLVKDFRSVSKQPIFFMIVAIFIILLLIILF >Mature_388_residues MKIDGIQESAENRNQLERELIKQNPVVKEGTIKAQMNTEVAVPKTPPVSFSFKELSSLQLNGTSAASLELYMKLMMNNAK KANDLIFYVMRAGIKNPTDSTKWQTVRSEISSQLSTILMKQHNFEAYFSENPANQKLFLANQKIMNEISFLLKMLPTLTF ETTGKYDFLRMMQIASGNMETGIQMMREFQGHIEHATRLDPIVDARQETNWMIKVLREFGNMFQSRHLLPYELQAENINI WKLSSEYLKLMNQLLPQIGAFPNGNIKIFHQQATKPLTELFQELQRLADGQMTQGGIAVILDRMQGQLTRLAQLFQKMEI EAGFTDTERILGSVDAEFASDMTKMMLLAQQEMSFFDLLVKDFRSVSKQPIFFMIVAIFIILLLIILF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44567; Mature: 44567
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIDGIQESAENRNQLERELIKQNPVVKEGTIKAQMNTEVAVPKTPPVSFSFKELSSLQL CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEECCCCCCCCCCHHHHHHEEC NGTSAASLELYMKLMMNNAKKANDLIFYVMRAGIKNPTDSTKWQTVRSEISSQLSTILMK CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH QHNFEAYFSENPANQKLFLANQKIMNEISFLLKMLPTLTFETTGKYDFLRMMQIASGNME HCCCCEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHH TGIQMMREFQGHIEHATRLDPIVDARQETNWMIKVLREFGNMFQSRHLLPYELQAENINI HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEE WKLSSEYLKLMNQLLPQIGAFPNGNIKIFHQQATKPLTELFQELQRLADGQMTQGGIAVI EEECHHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHCCCCCCCCHHHH LDRMQGQLTRLAQLFQKMEIEAGFTDTERILGSVDAEFASDMTKMMLLAQQEMSFFDLLV HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDFRSVSKQPIFFMIVAIFIILLLIILF HHHHHHCCCCHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MKIDGIQESAENRNQLERELIKQNPVVKEGTIKAQMNTEVAVPKTPPVSFSFKELSSLQL CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEECCCCCCCCCCHHHHHHEEC NGTSAASLELYMKLMMNNAKKANDLIFYVMRAGIKNPTDSTKWQTVRSEISSQLSTILMK CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH QHNFEAYFSENPANQKLFLANQKIMNEISFLLKMLPTLTFETTGKYDFLRMMQIASGNME HCCCCEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHH TGIQMMREFQGHIEHATRLDPIVDARQETNWMIKVLREFGNMFQSRHLLPYELQAENINI HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEE WKLSSEYLKLMNQLLPQIGAFPNGNIKIFHQQATKPLTELFQELQRLADGQMTQGGIAVI EEECHHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHCCCCCCCCHHHH LDRMQGQLTRLAQLFQKMEIEAGFTDTERILGSVDAEFASDMTKMMLLAQQEMSFFDLLV HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDFRSVSKQPIFFMIVAIFIILLLIILF HHHHHHCCCCHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA