Definition Listeria monocytogenes Clip81459, complete genome.
Accession NC_012488
Length 2,912,690

Click here to switch to the map view.

The map label for this gene is 226223333

Identifier: 226223333

GI number: 226223333

Start: 744480

End: 745646

Strand: Direct

Name: 226223333

Synonym: Lm4b_00730

Alternate gene names: NA

Gene position: 744480-745646 (Clockwise)

Preceding gene: 226223332

Following gene: 226223334

Centisome position: 25.56

GC content: 35.99

Gene sequence:

>1167_bases
ATGAAAATAGATGGCATTCAAGAATCTGCAGAAAATCGTAATCAACTAGAACGGGAACTCATTAAACAAAATCCAGTTGT
AAAAGAAGGTACGATAAAAGCACAAATGAATACAGAAGTAGCCGTACCGAAAACACCGCCAGTATCATTCTCTTTTAAAG
AATTAAGCAGCTTACAACTAAACGGAACAAGCGCAGCAAGTTTAGAATTATATATGAAATTAATGATGAACAATGCTAAA
AAAGCGAATGATTTAATCTTTTACGTGATGCGGGCGGGAATCAAAAATCCAACTGATTCTACTAAATGGCAAACAGTCAG
AAGCGAGATTAGTAGCCAATTAAGTACAATTCTAATGAAACAACATAATTTTGAAGCGTACTTTTCTGAAAATCCCGCGA
ATCAAAAATTATTTTTAGCCAATCAAAAAATTATGAACGAAATATCCTTTTTGCTAAAAATGTTGCCAACCTTAACTTTT
GAAACAACAGGAAAATACGACTTCTTGCGCATGATGCAAATAGCTTCTGGCAATATGGAGACTGGAATCCAAATGATGCG
CGAATTCCAGGGGCATATCGAACATGCGACAAGACTAGACCCGATTGTTGACGCCAGACAAGAAACGAACTGGATGATTA
AAGTGTTACGCGAATTTGGCAATATGTTCCAATCGCGCCACTTATTACCATATGAATTACAGGCAGAAAACATCAATATT
TGGAAGTTGAGTAGCGAATACTTAAAACTAATGAACCAACTTTTACCGCAAATTGGCGCATTTCCAAATGGGAATATCAA
AATTTTTCACCAACAAGCGACCAAGCCATTAACGGAACTTTTCCAAGAACTGCAACGCTTGGCAGACGGACAAATGACGC
AAGGTGGGATCGCCGTTATTTTAGACCGGATGCAAGGCCAACTTACACGACTTGCACAACTGTTTCAAAAAATGGAAATC
GAAGCAGGTTTCACCGATACAGAACGAATTTTAGGTAGTGTGGACGCCGAATTCGCTAGTGATATGACAAAAATGATGCT
ACTCGCACAACAAGAAATGTCATTTTTTGATTTATTAGTAAAAGATTTCCGAAGTGTTTCTAAACAACCAATATTTTTCA
TGATAGTTGCTATATTTATTATTTTATTATTAATTATTTTATTTTAA

Upstream 100 bases:

>100_bases
AGCAGTATCCCGTTTTGGATTCCGGCGCTCATGATTATTGGCGTTATTATTTTTTCGGGTAATAGAGCAATGAAATAAAA
GCAGAAGTGAGGTGGACGGA

Downstream 100 bases:

>100_bases
AAAAGATATTTTTTGAAAAAATATATACTTTTTCAGGTTGTTTCAGTATAATTAAATAGAAAAATAAGGTTTAGAAAGCG
AAAATGAGTTTTTCGGGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MKIDGIQESAENRNQLERELIKQNPVVKEGTIKAQMNTEVAVPKTPPVSFSFKELSSLQLNGTSAASLELYMKLMMNNAK
KANDLIFYVMRAGIKNPTDSTKWQTVRSEISSQLSTILMKQHNFEAYFSENPANQKLFLANQKIMNEISFLLKMLPTLTF
ETTGKYDFLRMMQIASGNMETGIQMMREFQGHIEHATRLDPIVDARQETNWMIKVLREFGNMFQSRHLLPYELQAENINI
WKLSSEYLKLMNQLLPQIGAFPNGNIKIFHQQATKPLTELFQELQRLADGQMTQGGIAVILDRMQGQLTRLAQLFQKMEI
EAGFTDTERILGSVDAEFASDMTKMMLLAQQEMSFFDLLVKDFRSVSKQPIFFMIVAIFIILLLIILF

Sequences:

>Translated_388_residues
MKIDGIQESAENRNQLERELIKQNPVVKEGTIKAQMNTEVAVPKTPPVSFSFKELSSLQLNGTSAASLELYMKLMMNNAK
KANDLIFYVMRAGIKNPTDSTKWQTVRSEISSQLSTILMKQHNFEAYFSENPANQKLFLANQKIMNEISFLLKMLPTLTF
ETTGKYDFLRMMQIASGNMETGIQMMREFQGHIEHATRLDPIVDARQETNWMIKVLREFGNMFQSRHLLPYELQAENINI
WKLSSEYLKLMNQLLPQIGAFPNGNIKIFHQQATKPLTELFQELQRLADGQMTQGGIAVILDRMQGQLTRLAQLFQKMEI
EAGFTDTERILGSVDAEFASDMTKMMLLAQQEMSFFDLLVKDFRSVSKQPIFFMIVAIFIILLLIILF
>Mature_388_residues
MKIDGIQESAENRNQLERELIKQNPVVKEGTIKAQMNTEVAVPKTPPVSFSFKELSSLQLNGTSAASLELYMKLMMNNAK
KANDLIFYVMRAGIKNPTDSTKWQTVRSEISSQLSTILMKQHNFEAYFSENPANQKLFLANQKIMNEISFLLKMLPTLTF
ETTGKYDFLRMMQIASGNMETGIQMMREFQGHIEHATRLDPIVDARQETNWMIKVLREFGNMFQSRHLLPYELQAENINI
WKLSSEYLKLMNQLLPQIGAFPNGNIKIFHQQATKPLTELFQELQRLADGQMTQGGIAVILDRMQGQLTRLAQLFQKMEI
EAGFTDTERILGSVDAEFASDMTKMMLLAQQEMSFFDLLVKDFRSVSKQPIFFMIVAIFIILLLIILF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44567; Mature: 44567

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.4 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.4 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIDGIQESAENRNQLERELIKQNPVVKEGTIKAQMNTEVAVPKTPPVSFSFKELSSLQL
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEECCCCCCCCCCHHHHHHEEC
NGTSAASLELYMKLMMNNAKKANDLIFYVMRAGIKNPTDSTKWQTVRSEISSQLSTILMK
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QHNFEAYFSENPANQKLFLANQKIMNEISFLLKMLPTLTFETTGKYDFLRMMQIASGNME
HCCCCEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHH
TGIQMMREFQGHIEHATRLDPIVDARQETNWMIKVLREFGNMFQSRHLLPYELQAENINI
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEE
WKLSSEYLKLMNQLLPQIGAFPNGNIKIFHQQATKPLTELFQELQRLADGQMTQGGIAVI
EEECHHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHCCCCCCCCHHHH
LDRMQGQLTRLAQLFQKMEIEAGFTDTERILGSVDAEFASDMTKMMLLAQQEMSFFDLLV
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDFRSVSKQPIFFMIVAIFIILLLIILF
HHHHHHCCCCHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKIDGIQESAENRNQLERELIKQNPVVKEGTIKAQMNTEVAVPKTPPVSFSFKELSSLQL
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCEEECCCCCCCCCCHHHHHHEEC
NGTSAASLELYMKLMMNNAKKANDLIFYVMRAGIKNPTDSTKWQTVRSEISSQLSTILMK
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHH
QHNFEAYFSENPANQKLFLANQKIMNEISFLLKMLPTLTFETTGKYDFLRMMQIASGNME
HCCCCEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHH
TGIQMMREFQGHIEHATRLDPIVDARQETNWMIKVLREFGNMFQSRHLLPYELQAENINI
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCEEE
WKLSSEYLKLMNQLLPQIGAFPNGNIKIFHQQATKPLTELFQELQRLADGQMTQGGIAVI
EEECHHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCHHHHHHHHHHHHHCCCCCCCCHHHH
LDRMQGQLTRLAQLFQKMEIEAGFTDTERILGSVDAEFASDMTKMMLLAQQEMSFFDLLV
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KDFRSVSKQPIFFMIVAIFIILLLIILF
HHHHHHCCCCHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA