| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226223326
Identifier: 226223326
GI number: 226223326
Start: 737510
End: 738556
Strand: Direct
Name: 226223326
Synonym: Lm4b_00723
Alternate gene names: NA
Gene position: 737510-738556 (Clockwise)
Preceding gene: 226223325
Following gene: 226223327
Centisome position: 25.32
GC content: 42.88
Gene sequence:
>1047_bases ATGCTAATCCCAGATAATTTGCTACAACCACTCGTCGGAAAAAAACAGGTCGAACCAAAAGAATCGTTAGCAGAAGAATT AGTAGAACTACCTTTTATTTCACTTTTAATGGAAAATAGCCCTGCGCCGCTCTTAAAGGGAGAAGCGGATAACGGAGAAC AAGCTACGCTACCACTAAAAGAAATCGCCCAACCACTCGTTTCAGCCAAGCTACTCGACGATGCACCAGAAACGAAACTG CAAGTAGCACCACTCGAACTCAAAGAAGTGAAAGAAACACTTGCGGCAATCGCCAAACAAGCAATTGATCAACCCAAAAT AGAAAACGCCCCGCAAGCTGTAGAAACTCCAGTAACAAATACACCGAAAGAACCCACAAAAAATGCCAGTAGGGAGCAAC AACCGCCACCAGAACTTATCATACCTACAAAAGAATCACCTAAACTAGCAGAAAACGTGGCCAAAAACCAACCAGTCCTA GCCAAATTACCTCAAGAAAAAGAAGTCGTGCAACTTTTCAAAGCGAGCATTAAAGAGCCAGTAACTGCCAAGGAAGAAGT TGCCGTCAAAAAGCCCGCAGAATCCAGCAATATTTGGCATGATACGGCGAAACAACTCACGCCAGCTGCCAAACCTGAAG TCCCAGTGACGTTAAAACAACTTGATAAAACCATCACCGACCAAATCGAACAGCTACAAAAATTCCAAGTGAAACAAAAT AAAGCCTTTTTCGCCATCCAGCCGGAGTCACTCGGAAAAGTCGAAGTTTTACTTAAAAAAATGCCCGATAAAATATTTGT ACATATCGAATATCAGGAACAAACGGCGAAACAAAAACTCGAACAGATGGCGCAAGATTTGCATAATCGTTTCCGAGATC GCGGCGTAGAAGTTGCCGTGACAATGACAGAAAAACAAGCACCGAAAGAGAATAACCAAGGCTCGGATGGTCGACACCAA GGTGAATCCAAAAAAGAAAAAGAACGCGAAAATCCACATCAGGAAAGAGCTAAACAAGAAGCATTTGATTTAGAGGAGGA GACGTAA
Upstream 100 bases:
>100_bases TGACACACGAAAAAAATGGCAACAGCTTGAAAATAAAAGAGAAGAACAAACATTACGCGATTTAAAAATGGTGCTATTAA AGTAAAAGGGAGGAAAACGC
Downstream 100 bases:
>100_bases TTTGGACGGAATTAGTAGTTTATCAGGAGCCGGTCAGGATACAAATAATGTAGTAACATCCAGCGTATCCAAAACCCTTG GCAAAGATGACTTCATGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MLIPDNLLQPLVGKKQVEPKESLAEELVELPFISLLMENSPAPLLKGEADNGEQATLPLKEIAQPLVSAKLLDDAPETKL QVAPLELKEVKETLAAIAKQAIDQPKIENAPQAVETPVTNTPKEPTKNASREQQPPPELIIPTKESPKLAENVAKNQPVL AKLPQEKEVVQLFKASIKEPVTAKEEVAVKKPAESSNIWHDTAKQLTPAAKPEVPVTLKQLDKTITDQIEQLQKFQVKQN KAFFAIQPESLGKVEVLLKKMPDKIFVHIEYQEQTAKQKLEQMAQDLHNRFRDRGVEVAVTMTEKQAPKENNQGSDGRHQ GESKKEKERENPHQERAKQEAFDLEEET
Sequences:
>Translated_348_residues MLIPDNLLQPLVGKKQVEPKESLAEELVELPFISLLMENSPAPLLKGEADNGEQATLPLKEIAQPLVSAKLLDDAPETKL QVAPLELKEVKETLAAIAKQAIDQPKIENAPQAVETPVTNTPKEPTKNASREQQPPPELIIPTKESPKLAENVAKNQPVL AKLPQEKEVVQLFKASIKEPVTAKEEVAVKKPAESSNIWHDTAKQLTPAAKPEVPVTLKQLDKTITDQIEQLQKFQVKQN KAFFAIQPESLGKVEVLLKKMPDKIFVHIEYQEQTAKQKLEQMAQDLHNRFRDRGVEVAVTMTEKQAPKENNQGSDGRHQ GESKKEKERENPHQERAKQEAFDLEEET >Mature_348_residues MLIPDNLLQPLVGKKQVEPKESLAEELVELPFISLLMENSPAPLLKGEADNGEQATLPLKEIAQPLVSAKLLDDAPETKL QVAPLELKEVKETLAAIAKQAIDQPKIENAPQAVETPVTNTPKEPTKNASREQQPPPELIIPTKESPKLAENVAKNQPVL AKLPQEKEVVQLFKASIKEPVTAKEEVAVKKPAESSNIWHDTAKQLTPAAKPEVPVTLKQLDKTITDQIEQLQKFQVKQN KAFFAIQPESLGKVEVLLKKMPDKIFVHIEYQEQTAKQKLEQMAQDLHNRFRDRGVEVAVTMTEKQAPKENNQGSDGRHQ GESKKEKERENPHQERAKQEAFDLEEET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38954; Mature: 38954
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLIPDNLLQPLVGKKQVEPKESLAEELVELPFISLLMENSPAPLLKGEADNGEQATLPLK CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH EIAQPLVSAKLLDDAPETKLQVAPLELKEVKETLAAIAKQAIDQPKIENAPQAVETPVTN HHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCC TPKEPTKNASREQQPPPELIIPTKESPKLAENVAKNQPVLAKLPQEKEVVQLFKASIKEP CCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCC VTAKEEVAVKKPAESSNIWHDTAKQLTPAAKPEVPVTLKQLDKTITDQIEQLQKFQVKQN CCCHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC KAFFAIQPESLGKVEVLLKKMPDKIFVHIEYQEQTAKQKLEQMAQDLHNRFRDRGVEVAV CEEEEECCCCCCHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE TMTEKQAPKENNQGSDGRHQGESKKEKERENPHQERAKQEAFDLEEET EECCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCC >Mature Secondary Structure MLIPDNLLQPLVGKKQVEPKESLAEELVELPFISLLMENSPAPLLKGEADNGEQATLPLK CCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH EIAQPLVSAKLLDDAPETKLQVAPLELKEVKETLAAIAKQAIDQPKIENAPQAVETPVTN HHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCC TPKEPTKNASREQQPPPELIIPTKESPKLAENVAKNQPVLAKLPQEKEVVQLFKASIKEP CCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHCCCCHHHHCCCHHHHHHHHHHHHCCC VTAKEEVAVKKPAESSNIWHDTAKQLTPAAKPEVPVTLKQLDKTITDQIEQLQKFQVKQN CCCHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC KAFFAIQPESLGKVEVLLKKMPDKIFVHIEYQEQTAKQKLEQMAQDLHNRFRDRGVEVAV CEEEEECCCCCCHHHHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE TMTEKQAPKENNQGSDGRHQGESKKEKERENPHQERAKQEAFDLEEET EECCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA