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The map label for this gene is flaA

Identifier: 226223321

GI number: 226223321

Start: 733380

End: 734243

Strand: Direct

Name: flaA

Synonym: Lm4b_00718

Alternate gene names: 226223321

Gene position: 733380-734243 (Clockwise)

Preceding gene: 226223320

Following gene: 226223322

Centisome position: 25.18

GC content: 38.77

Gene sequence:

>864_bases
ATGAAAGTAAATACTAATATCATTAGCTTGAAAACACAAGAATATCTTCGTAAAAATAACGAAGGCATGACTCAAGCGCA
AGAACGTTTGGCATCTGGTAAACGTATTAACAGTTCTCTTGATGACGCTGCTGGTCTTGCAGTTGTTACTCGTATGAACG
TTAAATCTACAGGCTTAGATGCAGCAAGCAAAAACTCATCCATGGGTATTGACTTGTTACAAACAGCGGATTCAGCTCTT
AGCTCCATGAGTTCAATCTTGCAACGTATGCGTCAATTAGCAGTACAATCTTCTAACGGTTCATTCAGTGACGAAGATCG
TAAACAATACACTGCTGAATTCGGTAGCTTGATCAAAGAACTTGATCACGTTGCTGACACTACTAACTACAACAACATCA
AATTACTAGATCAAACTGCTACAGGTGCTGCTACTCAAGTAAGCATCCAAGCGTCTGATAAAGCTAATGACTTAATCAAT
ATCGATCTTTTCAATGCGAAAGGTCTTTCTGCTGGAACAATCACTTTAGGTAGTGGTTCTACAGTTGCTGGTTATAGTGC
ATTATCTGTTGCTGATGCTGATTCTTCTCAAGAAGCAACGGAAGCTATTGATGAATTAATCAATAACATCTCTAACGGTC
GTGCACTTCTAGGTGCTGGTATGAGTCGCCTTAGCTACAATGTATCTAACGTGAACAACCAATCCATCGCAACTAAAGCA
TCTGCTTCCTCTATTGAAGATGCAGATATGGCTGCTGAAATGTCCGAAATGACTAAATACAAAATTCTTACACAAACATC
TATCAGCATGCTTTCTCAAGCAAACCAAACACCGCAAATGTTAACTCAATTAATTAACAGCTAA

Upstream 100 bases:

>100_bases
TTTAATAAAAAAACATTTGATTTTTTAAAAAAATGAAGATATAATAAAGCATATAGAGAAGAGAAGTCTTTTCTAAACCG
AATGTAGGAGGGAAACACAA

Downstream 100 bases:

>100_bases
TAACATATCAAATTCATTTATCGAACATTGTTTACCCTTAGCCCCTCGTCACCCCGGACGAGGGGCTTTTCTTTTTATTT
ATAAAAATATTTTTGGATTA

Product: flagellin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MKVNTNIISLKTQEYLRKNNEGMTQAQERLASGKRINSSLDDAAGLAVVTRMNVKSTGLDAASKNSSMGIDLLQTADSAL
SSMSSILQRMRQLAVQSSNGSFSDEDRKQYTAEFGSLIKELDHVADTTNYNNIKLLDQTATGAATQVSIQASDKANDLIN
IDLFNAKGLSAGTITLGSGSTVAGYSALSVADADSSQEATEAIDELINNISNGRALLGAGMSRLSYNVSNVNNQSIATKA
SASSIEDADMAAEMSEMTKYKILTQTSISMLSQANQTPQMLTQLINS

Sequences:

>Translated_287_residues
MKVNTNIISLKTQEYLRKNNEGMTQAQERLASGKRINSSLDDAAGLAVVTRMNVKSTGLDAASKNSSMGIDLLQTADSAL
SSMSSILQRMRQLAVQSSNGSFSDEDRKQYTAEFGSLIKELDHVADTTNYNNIKLLDQTATGAATQVSIQASDKANDLIN
IDLFNAKGLSAGTITLGSGSTVAGYSALSVADADSSQEATEAIDELINNISNGRALLGAGMSRLSYNVSNVNNQSIATKA
SASSIEDADMAAEMSEMTKYKILTQTSISMLSQANQTPQMLTQLINS
>Mature_287_residues
MKVNTNIISLKTQEYLRKNNEGMTQAQERLASGKRINSSLDDAAGLAVVTRMNVKSTGLDAASKNSSMGIDLLQTADSAL
SSMSSILQRMRQLAVQSSNGSFSDEDRKQYTAEFGSLIKELDHVADTTNYNNIKLLDQTATGAATQVSIQASDKANDLIN
IDLFNAKGLSAGTITLGSGSTVAGYSALSVADADSSQEATEAIDELINNISNGRALLGAGMSRLSYNVSNVNNQSIATKA
SASSIEDADMAAEMSEMTKYKILTQTSISMLSQANQTPQMLTQLINS

Specific function: Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=161, Percent_Identity=38.5093167701863, Blast_Score=100, Evalue=9e-23,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 30445; Mature: 30445

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVNTNIISLKTQEYLRKNNEGMTQAQERLASGKRINSSLDDAAGLAVVTRMNVKSTGLD
CCCCCEEEEEEHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHCEEEEEECCCCCCCCC
AASKNSSMGIDLLQTADSALSSMSSILQRMRQLAVQSSNGSFSDEDRKQYTAEFGSLIKE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
LDHVADTTNYNNIKLLDQTATGAATQVSIQASDKANDLINIDLFNAKGLSAGTITLGSGS
HHHHHCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCEEEECCCC
TVAGYSALSVADADSSQEATEAIDELINNISNGRALLGAGMSRLSYNVSNVNNQSIATKA
CCCCCHHEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHCCHHHHEECCCCCCCCHHHHHC
SASSIEDADMAAEMSEMTKYKILTQTSISMLSQANQTPQMLTQLINS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC
>Mature Secondary Structure
MKVNTNIISLKTQEYLRKNNEGMTQAQERLASGKRINSSLDDAAGLAVVTRMNVKSTGLD
CCCCCEEEEEEHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHCEEEEEECCCCCCCCC
AASKNSSMGIDLLQTADSALSSMSSILQRMRQLAVQSSNGSFSDEDRKQYTAEFGSLIKE
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
LDHVADTTNYNNIKLLDQTATGAATQVSIQASDKANDLINIDLFNAKGLSAGTITLGSGS
HHHHHCCCCCCCEEEEECCCCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCEEEECCCC
TVAGYSALSVADADSSQEATEAIDELINNISNGRALLGAGMSRLSYNVSNVNNQSIATKA
CCCCCHHEEECCCCCCHHHHHHHHHHHHHHCCCHHHHHCCHHHHEECCCCCCCCHHHHHC
SASSIEDADMAAEMSEMTKYKILTQTSISMLSQANQTPQMLTQLINS
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11679669 [H]