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The map label for this gene is motB

Identifier: 226223317

GI number: 226223317

Start: 728947

End: 729774

Strand: Direct

Name: motB

Synonym: Lm4b_00714

Alternate gene names: 226223317

Gene position: 728947-729774 (Clockwise)

Preceding gene: 226223316

Following gene: 226223318

Centisome position: 25.03

GC content: 42.15

Gene sequence:

>828_bases
GTGGCCAAGCGTCGCAAGAAACCGCAGGAGGAACACGTTGATGAAACGTGGTTAATTCCATATAGTGATTTGCTGACACT
TTTACTTGCGCTATTCATCGTTCTGTTTGCCTCCAGTTCCGTTGATGCTAAGAAGTTTGAACAAATGGGAAATGCATTTA
AGAAAATTGTAGAGGAAGGCGCGGCAGGCAATCAAGCATATGTATCCAAAGAAAAAGGACCAGATGATCCTAATGTGAAT
GCAGTCTTGAAGGCGATGGAAGAGCAAGATAAAAAGAAAGAAGCAACCGAACAAGAGAAAGCCAAAAAAGCAGCAGCGGC
CTTACTTAAAAAGCAAAACGAAGAAAAGATTGAAGCCTTTAAAAAACAAATTGATAGTTATATTGCAGCAGAACATTTGG
GAGCAAAAATGACAACGAAATACTCGGATGAAGGGCTTTTGATAACTATCCGTGATGATATTTTATTCCAGTCAGGAAGT
GCAGAATTAACTGCAGGAAAACGCGAGATTGCCAAAGAAATCGGCGAACTTTTTGCGCAAGGAAAAGGAACGATGGAAGG
GATTGTTTCTGGACATACCGATAATGTGCCAATAAGCACCTCAATTTACTCTTCCAACTGGGAATTAAGTGTCGCGCGCG
CCGTTAATTTCATGGAAGCAATCATTCAAGAAAATAGCGAAGTAAACCCAGGCGAGTTCAGTGCTCGCGGCTACGGAGAA
TTCAGACCTGTCGCCAAAAATGATATCGCAGCAAATCGCGAAAAAAATCGGCGTGTAGAAATCATGGTACGCCCAATTAA
TCGCGATACGCTAGATGAAGATGAGTAG

Upstream 100 bases:

>100_bases
GTTGTGGAAGAACGTTTATTATCTTTTTTAAGTCCAAAAGAGAAAGATGTGCTGCGAAATGGAAAAGGGAAGAAAACGAG
AGAAGTGGAGGAAATTGAGC

Downstream 100 bases:

>100_bases
GTGAAGTGTTTGCAACTTTTTTTAAGTGGTTCGCATACGTTAACCGACTATGACAAACAAGAAATACAAGCATACCTCGA
AAAATTTGCACCAGTGAACC

Product: motility protein (flagellar motor rotation) MotB

Products: NA

Alternate protein names: Chemotaxis protein MotB [H]

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MAKRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVN
AVLKAMEEQDKKKEATEQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAEHLGAKMTTKYSDEGLLITIRDDILFQSGS
AELTAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARAVNFMEAIIQENSEVNPGEFSARGYGE
FRPVAKNDIAANREKNRRVEIMVRPINRDTLDEDE

Sequences:

>Translated_275_residues
MAKRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVN
AVLKAMEEQDKKKEATEQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAEHLGAKMTTKYSDEGLLITIRDDILFQSGS
AELTAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARAVNFMEAIIQENSEVNPGEFSARGYGE
FRPVAKNDIAANREKNRRVEIMVRPINRDTLDEDE
>Mature_274_residues
AKRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNA
VLKAMEEQDKKKEATEQEKAKKAAAALLKKQNEEKIEAFKKQIDSYIAAEHLGAKMTTKYSDEGLLITIRDDILFQSGSA
ELTAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARAVNFMEAIIQENSEVNPGEFSARGYGEF
RPVAKNDIAANREKNRRVEIMVRPINRDTLDEDE

Specific function: MotA and MotB comprise the stator element of the flagellar motor complex. Required for the rotation of the flagellar motor. Might be a linker that fastens the torque- generating machinery to the cell wall [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell membrane; Single-pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788198, Length=223, Percent_Identity=25.1121076233184, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 30644; Mature: 30513

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEG
CCCCCCCCHHHCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC
AAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEATEQEKAKKAAAALLKKQNEEKIEAF
CCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
KKQIDSYIAAEHLGAKMTTKYSDEGLLITIRDDILFQSGSAELTAGKREIAKEIGELFAQ
HHHHHHHHHHHHHCCHHEEEECCCCEEEEEECCEEECCCCCCHHCCHHHHHHHHHHHHHC
GKGTMEGIVSGHTDNVPISTSIYSSNWELSVARAVNFMEAIIQENSEVNPGEFSARGYGE
CCCCHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
FRPVAKNDIAANREKNRRVEIMVRPINRDTLDEDE
CCCCCCCCHHCCCCCCCEEEEEEEECCCCCCCCCC
>Mature Secondary Structure 
AKRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAKKFEQMGNAFKKIVEEG
CCCCCCCHHHCCCCEEECCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC
AAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEATEQEKAKKAAAALLKKQNEEKIEAF
CCCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
KKQIDSYIAAEHLGAKMTTKYSDEGLLITIRDDILFQSGSAELTAGKREIAKEIGELFAQ
HHHHHHHHHHHHHCCHHEEEECCCCEEEEEECCEEECCCCCCHHCCHHHHHHHHHHHHHC
GKGTMEGIVSGHTDNVPISTSIYSSNWELSVARAVNFMEAIIQENSEVNPGEFSARGYGE
CCCCHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
FRPVAKNDIAANREKNRRVEIMVRPINRDTLDEDE
CCCCCCCCHHCCCCCCCEEEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1624413; 9384377 [H]