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The map label for this gene is yadH [H]

Identifier: 226223298

GI number: 226223298

Start: 713865

End: 714635

Strand: Direct

Name: yadH [H]

Synonym: Lm4b_00695

Alternate gene names: 226223298

Gene position: 713865-714635 (Clockwise)

Preceding gene: 226223297

Following gene: 226223299

Centisome position: 24.51

GC content: 40.21

Gene sequence:

>771_bases
ATGTTTAATCTATATTTTACAGCTTTAAAAAGTCTAGCGGCGAAAGAAACGAATCGCTATATGCGAATTTGGGTACAGAC
ACTCGTGCCGCCAGTTATCACGACTTCGCTTTATTTTATTATTTTCGGGAAAATGATTGGTAGCCGCATTGGGGAAATGA
ATGGCTTTTCTTATATGGAGTACATTGTTCCGGGGCTGATTATGATGTCCGTCATTACTAGTTCTTACGCCAATGTATCG
TCTTCCTTTTTCTCGCAAAAGTTTCAGAAAAACATTGAAGAAATTCTTGTTGCGCCGGTGCCAACGCATATTATTATTTG
GGGCTTTTTGATTGGTGGGATTGGTAGAAGTGTTTTAGTTGGAGCACTTGTCACGCTTATTTCGATGGTGTTTGTGCCGA
TTCACATTCATTCGTGGACGATTGGTATTATTACCTTCTTAATGACGGCGATTTTATTTTCACTCGCGGGACTTATTAAC
GGGATTTTCGCTAGATCATTTGACGATGTATCCATTGTCCCAACTTTTGTCTTACAACCGTTAACGTATCTAGGCGGCGT
ATTCTACGCGATTTCGATGTTACCGCCAATCTGGCAAGCGATTTCTAAAGTGAACCCGATTGTCTATATGATTTCCGGAT
TCCGCTACGGTTTCCTAGGTGTTACAGATGTACCAGTAGCAATTTCTCTATCCATTCTTGTTGTATTTAGTGCCGTTCTT
TACTCGATTTGTTGGTATTTAATTAGTAAAGGGCGAGGACTTCGAAGTTAA

Upstream 100 bases:

>100_bases
GAACACGGTATTAAAGTGCTTTCGATGCGTAATAAATCGAATCGCCTGGAAGAACTATTCTTGAAAATTACAGAAGAAAA
ACATCAAGTGGGGGAGAAAC

Downstream 100 bases:

>100_bases
TAGCGATTTTTTCAAAAAGAGAGCGGATTTCCGTTCTCTTTTTTTCATGTTTACTACAATTCTTTTTCAATTTGATGTTA
AACGTTTTAGCGTAAAACTG

Product: ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MFNLYFTALKSLAAKETNRYMRIWVQTLVPPVITTSLYFIIFGKMIGSRIGEMNGFSYMEYIVPGLIMMSVITSSYANVS
SSFFSQKFQKNIEEILVAPVPTHIIIWGFLIGGIGRSVLVGALVTLISMVFVPIHIHSWTIGIITFLMTAILFSLAGLIN
GIFARSFDDVSIVPTFVLQPLTYLGGVFYAISMLPPIWQAISKVNPIVYMISGFRYGFLGVTDVPVAISLSILVVFSAVL
YSICWYLISKGRGLRS

Sequences:

>Translated_256_residues
MFNLYFTALKSLAAKETNRYMRIWVQTLVPPVITTSLYFIIFGKMIGSRIGEMNGFSYMEYIVPGLIMMSVITSSYANVS
SSFFSQKFQKNIEEILVAPVPTHIIIWGFLIGGIGRSVLVGALVTLISMVFVPIHIHSWTIGIITFLMTAILFSLAGLIN
GIFARSFDDVSIVPTFVLQPLTYLGGVFYAISMLPPIWQAISKVNPIVYMISGFRYGFLGVTDVPVAISLSILVVFSAVL
YSICWYLISKGRGLRS
>Mature_256_residues
MFNLYFTALKSLAAKETNRYMRIWVQTLVPPVITTSLYFIIFGKMIGSRIGEMNGFSYMEYIVPGLIMMSVITSSYANVS
SSFFSQKFQKNIEEILVAPVPTHIIIWGFLIGGIGRSVLVGALVTLISMVFVPIHIHSWTIGIITFLMTAILFSLAGLIN
GIFARSFDDVSIVPTFVLQPLTYLGGVFYAISMLPPIWQAISKVNPIVYMISGFRYGFLGVTDVPVAISLSILVVFSAVL
YSICWYLISKGRGLRS

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=256, Percent_Identity=67.578125, Blast_Score=370, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 28416; Mature: 28416

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHCCCCCCC
>Mature Secondary Structure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HHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]