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The map label for this gene is 226223286

Identifier: 226223286

GI number: 226223286

Start: 702455

End: 703351

Strand: Reverse

Name: 226223286

Synonym: Lm4b_00683

Alternate gene names: NA

Gene position: 703351-702455 (Counterclockwise)

Preceding gene: 226223291

Following gene: 226223280

Centisome position: 24.15

GC content: 32.78

Gene sequence:

>897_bases
ATGGTCGGGTATGGAAAAACAGTGAGAGATATTCGCACTTCTAAAGGAATACATCAAAAAGATTTATACGATAATATCAT
TTCCAAATCCTTCGCTATCGAATTTGAAAAAGGAAAGCACGACATCACACTAACCTTATTTGAAAAAATTTTAAAACGGA
TGAATATGGACTTGGACGAGTTCTTTTATATCCATAGAGAATTGTCAGTATCAGCTGAGAAAAATTATTTATGCATGAAT
CAAGAACGCGGAAATATATATGATCTTGCGAGTTTGGAACTATTATATAACGAGCTTTCTAAACATAATGGCGAATTAGT
GGAGGTCTGGAAAGCATTTGTTCGTTCGCGAATTAAATTGGTCGAACATCTCTTTAAATATCATGAATTTACAGTAGACG
TGATTACACCTAAAGATAAATGCACGATTCAAAAGTATTTATTTTCGATTGATACGTGGACACTTGAAGAACTTAAGATT
TGCGCTAACTCCATCTACTTTTTTGAAGAAGATTTACAAATTCAATTTTTAAACCAGGTCATTAAGGCCATTCACTCTTA
TAAAAACTACGACCGTGCCAGACGTGTTTTATGTACCCTTTTAATTAATACGATTGAAATGTTTATTTCGCGCGGTCAAC
TATCCTCTGCTAGTAAACTCATCATCCTATTAGACTCTTTATGTCTGTATAACGAAAGCGCCTTTTACCGAAATATCTCT
CATTTTTTAAAAGGGTTAGTAAAAATGCAAAATAATCATATCCAAGAAGGATACAACCAAGCAAAAAAAGCCATTCAAAT
TATGAATGACCTCCGTTTTGAAGAGATTGCTTATTTATATGAAATTTTGTTGGATCAGTTTATCAGGATAAAAGGTATAG
ATATTGTTAAGAGCTAG

Upstream 100 bases:

>100_bases
TTCTATGCTACGATTTAAAAGTAAAATGGCTGTTAAACTCCTTGCAACACCTCTTAGATGCAGCCCACATCTAAATTATG
AAACAAAAGGAGTAACTTGA

Downstream 100 bases:

>100_bases
CTTTCTAGCAGCCAAGATTCATTCATACTTTTGTCTTTCCCAAAATGTTTTCCGTGCACATCAATGACTGAGTGCCATTC
TTTACATAGTTTATGTGGAA

Product: transcription regulator (Rgg type)

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Transcription Regulator; Rgg/GadR/MutR Family Transcriptional Activator

Number of amino acids: Translated: 298; Mature: 298

Protein sequence:

>298_residues
MVGYGKTVRDIRTSKGIHQKDLYDNIISKSFAIEFEKGKHDITLTLFEKILKRMNMDLDEFFYIHRELSVSAEKNYLCMN
QERGNIYDLASLELLYNELSKHNGELVEVWKAFVRSRIKLVEHLFKYHEFTVDVITPKDKCTIQKYLFSIDTWTLEELKI
CANSIYFFEEDLQIQFLNQVIKAIHSYKNYDRARRVLCTLLINTIEMFISRGQLSSASKLIILLDSLCLYNESAFYRNIS
HFLKGLVKMQNNHIQEGYNQAKKAIQIMNDLRFEEIAYLYEILLDQFIRIKGIDIVKS

Sequences:

>Translated_298_residues
MVGYGKTVRDIRTSKGIHQKDLYDNIISKSFAIEFEKGKHDITLTLFEKILKRMNMDLDEFFYIHRELSVSAEKNYLCMN
QERGNIYDLASLELLYNELSKHNGELVEVWKAFVRSRIKLVEHLFKYHEFTVDVITPKDKCTIQKYLFSIDTWTLEELKI
CANSIYFFEEDLQIQFLNQVIKAIHSYKNYDRARRVLCTLLINTIEMFISRGQLSSASKLIILLDSLCLYNESAFYRNIS
HFLKGLVKMQNNHIQEGYNQAKKAIQIMNDLRFEEIAYLYEILLDQFIRIKGIDIVKS
>Mature_298_residues
MVGYGKTVRDIRTSKGIHQKDLYDNIISKSFAIEFEKGKHDITLTLFEKILKRMNMDLDEFFYIHRELSVSAEKNYLCMN
QERGNIYDLASLELLYNELSKHNGELVEVWKAFVRSRIKLVEHLFKYHEFTVDVITPKDKCTIQKYLFSIDTWTLEELKI
CANSIYFFEEDLQIQFLNQVIKAIHSYKNYDRARRVLCTLLINTIEMFISRGQLSSASKLIILLDSLCLYNESAFYRNIS
HFLKGLVKMQNNHIQEGYNQAKKAIQIMNDLRFEEIAYLYEILLDQFIRIKGIDIVKS

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35250; Mature: 35250

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGYGKTVRDIRTSKGIHQKDLYDNIISKSFAIEFEKGKHDITLTLFEKILKRMNMDLDE
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCHHH
FFYIHRELSVSAEKNYLCMNQERGNIYDLASLELLYNELSKHNGELVEVWKAFVRSRIKL
HHHHHHHHHCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
VEHLFKYHEFTVDVITPKDKCTIQKYLFSIDTWTLEELKICANSIYFFEEDLQIQFLNQV
HHHHHHHHHEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
IKAIHSYKNYDRARRVLCTLLINTIEMFISRGQLSSASKLIILLDSLCLYNESAFYRNIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHH
HFLKGLVKMQNNHIQEGYNQAKKAIQIMNDLRFEEIAYLYEILLDQFIRIKGIDIVKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure
MVGYGKTVRDIRTSKGIHQKDLYDNIISKSFAIEFEKGKHDITLTLFEKILKRMNMDLDE
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHCCCHHH
FFYIHRELSVSAEKNYLCMNQERGNIYDLASLELLYNELSKHNGELVEVWKAFVRSRIKL
HHHHHHHHHCCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
VEHLFKYHEFTVDVITPKDKCTIQKYLFSIDTWTLEELKICANSIYFFEEDLQIQFLNQV
HHHHHHHHHEEEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCHHHHHHHHH
IKAIHSYKNYDRARRVLCTLLINTIEMFISRGQLSSASKLIILLDSLCLYNESAFYRNIS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHH
HFLKGLVKMQNNHIQEGYNQAKKAIQIMNDLRFEEIAYLYEILLDQFIRIKGIDIVKS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA