| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226223262
Identifier: 226223262
GI number: 226223262
Start: 676222
End: 676893
Strand: Direct
Name: 226223262
Synonym: Lm4b_00659
Alternate gene names: NA
Gene position: 676222-676893 (Clockwise)
Preceding gene: 226223261
Following gene: 226223263
Centisome position: 23.22
GC content: 31.85
Gene sequence:
>672_bases ATGGAAATGAAAAAACTTATTAAATGCACTGCACCAATCTTTATTGCTACGCTCATTATTTTGCCTGTTTCTCCGTCTAT TTCAGCATTGGCGAATGAGACCTCAGAGATTAGCGAAGGGATTAATGCAACAGAAAAAACAATTGAAACAGAAGAGCTTG TCGTAGAAGAAATTAGTAATGATGAATATCAAGTACTGGATAAAGAGACAAATGAAACAACTTCAATTGAATTTTCAAAA AATCATATGCAATCTACTATTACAAATCCAGATGGCACTATAGACACAATGATTAAAAAGGATAACTTAATTTACCTAAA TGGTGAAGTTATAGGTGAAGAGGTAAAAGAAGAATCGAGACAATTATTAAAAGCCTCTGCTTATAAATATGTTACGACGT TTAAAACAAAAATGTCACTAAAGAAAACAAGTGCATCTATTGCAGTGTCATTAGCTGGTTTGCTTGGAGGACCCGTTGGA GTATTTAGTACAGTAGCAGGTATGCTACTAACATTGAAATCTTATGCCCCGAGTAAAGAGGTTTATATAAAAATTAAACA ATATTATAATAGTTACTCAAGGGAAATAAAAAATGATTATTCTATTTATAAAAAATCTAACTATACTGGACTGCTTAAGA CATTTACACATAAATATCGTCCGTACGGTTGA
Upstream 100 bases:
>100_bases GTTCACGACAAGAATCGGGCATTTCATTACATTTTTGGTTATACATTGGCTTTTCATGATACATTACATGTGTAAGACAT ATAAAGGAGATGGTACATAA
Downstream 100 bases:
>100_bases AAATTGATATAGTATTGGAGGCTTAGGTTATGAAAAAAGTGAAAATGGAAAAGTGGCTCATTGGTGTATATGCCCTTGTA GTATTAATGTGTATTATTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MEMKKLIKCTAPIFIATLIILPVSPSISALANETSEISEGINATEKTIETEELVVEEISNDEYQVLDKETNETTSIEFSK NHMQSTITNPDGTIDTMIKKDNLIYLNGEVIGEEVKEESRQLLKASAYKYVTTFKTKMSLKKTSASIAVSLAGLLGGPVG VFSTVAGMLLTLKSYAPSKEVYIKIKQYYNSYSREIKNDYSIYKKSNYTGLLKTFTHKYRPYG
Sequences:
>Translated_223_residues MEMKKLIKCTAPIFIATLIILPVSPSISALANETSEISEGINATEKTIETEELVVEEISNDEYQVLDKETNETTSIEFSK NHMQSTITNPDGTIDTMIKKDNLIYLNGEVIGEEVKEESRQLLKASAYKYVTTFKTKMSLKKTSASIAVSLAGLLGGPVG VFSTVAGMLLTLKSYAPSKEVYIKIKQYYNSYSREIKNDYSIYKKSNYTGLLKTFTHKYRPYG >Mature_223_residues MEMKKLIKCTAPIFIATLIILPVSPSISALANETSEISEGINATEKTIETEELVVEEISNDEYQVLDKETNETTSIEFSK NHMQSTITNPDGTIDTMIKKDNLIYLNGEVIGEEVKEESRQLLKASAYKYVTTFKTKMSLKKTSASIAVSLAGLLGGPVG VFSTVAGMLLTLKSYAPSKEVYIKIKQYYNSYSREIKNDYSIYKKSNYTGLLKTFTHKYRPYG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24934; Mature: 24934
Theoretical pI: Translated: 7.47; Mature: 7.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEMKKLIKCTAPIFIATLIILPVSPSISALANETSEISEGINATEKTIETEELVVEEISN CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHCC DEYQVLDKETNETTSIEFSKNHMQSTITNPDGTIDTMIKKDNLIYLNGEVIGEEVKEESR CCEEEEECCCCCCEEEEEHHHHHHHHCCCCCCCHHHEEECCCEEEECCHHHHHHHHHHHH QLLKASAYKYVTTFKTKMSLKKTSASIAVSLAGLLGGPVGVFSTVAGMLLTLKSYAPSKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHH VYIKIKQYYNSYSREIKNDYSIYKKSNYTGLLKTFTHKYRPYG HEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC >Mature Secondary Structure MEMKKLIKCTAPIFIATLIILPVSPSISALANETSEISEGINATEKTIETEELVVEEISN CCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHCC DEYQVLDKETNETTSIEFSKNHMQSTITNPDGTIDTMIKKDNLIYLNGEVIGEEVKEESR CCEEEEECCCCCCEEEEEHHHHHHHHCCCCCCCHHHEEECCCEEEECCHHHHHHHHHHHH QLLKASAYKYVTTFKTKMSLKKTSASIAVSLAGLLGGPVGVFSTVAGMLLTLKSYAPSKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCHH VYIKIKQYYNSYSREIKNDYSIYKKSNYTGLLKTFTHKYRPYG HEEHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA