| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226223092
Identifier: 226223092
GI number: 226223092
Start: 505108
End: 505593
Strand: Direct
Name: 226223092
Synonym: Lm4b_00489
Alternate gene names: NA
Gene position: 505108-505593 (Clockwise)
Preceding gene: 226223091
Following gene: 226223093
Centisome position: 17.34
GC content: 37.45
Gene sequence:
>486_bases ATGAATAAATTAGTATTAAGTACGTTAAGTGTAGCAGCAATGGGTATGGTGTTTTTTAGCGGAGGGACAGCCTACGCTGC AGATAAAGAAGGAAATACAGTAGTGGAATATTCTGTTGAAGGGGATTATACCCTCGTTGTACCCGAAAAAGTAAATTTAT CTAATGATAACGCCACAGAAATGTCTGTGAAAACAATCAATCGTAACTTAGAACCAGGAAAAGAAGTAGAGGTGACATTA TCTAGTGGATTATCAGCCGATGGAGAGATTGAATTACAACGGGTTGGCGCTATTTCGGACGTAATAACTAGTAGTTTTAA GAGTAATAATAGTGTAGTACCCATGGCTAATCCCGTCATTGGAAGCTTTTCAGGTTATGCGATGGAGGAAACAGAAGTAA GTAAAATTCAAATTGGAAACCCTCAAGGAGACAAAAAAGCTGGAGCATATCAAACAACGTTAACTTTTACAGCTGCTTTT AAATAA
Upstream 100 bases:
>100_bases TTAAAATATGAATGTTTTTCTTTAAACGATCAGTCACCTTTAAACGGGTCTGAAATAAATTTAAAATTAGTTGTCGTCTA GACAAAGGAGGAAATTTTTT
Downstream 100 bases:
>100_bases GAAATTACGAAAGGAGTTGTGCATTTCTTGAAAAGGAAATTAGTTCTGGCAATGGTACTAATCAGCTTTTGTGGGATGTT CCTCTTATCGCCTGAACGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MNKLVLSTLSVAAMGMVFFSGGTAYAADKEGNTVVEYSVEGDYTLVVPEKVNLSNDNATEMSVKTINRNLEPGKEVEVTL SSGLSADGEIELQRVGAISDVITSSFKSNNSVVPMANPVIGSFSGYAMEETEVSKIQIGNPQGDKKAGAYQTTLTFTAAF K
Sequences:
>Translated_161_residues MNKLVLSTLSVAAMGMVFFSGGTAYAADKEGNTVVEYSVEGDYTLVVPEKVNLSNDNATEMSVKTINRNLEPGKEVEVTL SSGLSADGEIELQRVGAISDVITSSFKSNNSVVPMANPVIGSFSGYAMEETEVSKIQIGNPQGDKKAGAYQTTLTFTAAF K >Mature_161_residues MNKLVLSTLSVAAMGMVFFSGGTAYAADKEGNTVVEYSVEGDYTLVVPEKVNLSNDNATEMSVKTINRNLEPGKEVEVTL SSGLSADGEIELQRVGAISDVITSSFKSNNSVVPMANPVIGSFSGYAMEETEVSKIQIGNPQGDKKAGAYQTTLTFTAAF K
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17017; Mature: 17017
Theoretical pI: Translated: 4.29; Mature: 4.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLVLSTLSVAAMGMVFFSGGTAYAADKEGNTVVEYSVEGDYTLVVPEKVNLSNDNATE CCCCHHHHHHHHHEEEEEECCCEEEEECCCCCEEEEEEECCCEEEEECCEECCCCCCCCE MSVKTINRNLEPGKEVEVTLSSGLSADGEIELQRVGAISDVITSSFKSNNSVVPMANPVI EEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEECCCCC GSFSGYAMEETEVSKIQIGNPQGDKKAGAYQTTLTFTAAFK CCCCCCEECCCCEEEEEECCCCCCCCCCEEEEEEEEEEECC >Mature Secondary Structure MNKLVLSTLSVAAMGMVFFSGGTAYAADKEGNTVVEYSVEGDYTLVVPEKVNLSNDNATE CCCCHHHHHHHHHEEEEEECCCEEEEECCCCCEEEEEEECCCEEEEECCEECCCCCCCCE MSVKTINRNLEPGKEVEVTLSSGLSADGEIELQRVGAISDVITSSFKSNNSVVPMANPVI EEEEEECCCCCCCCEEEEEECCCCCCCCEEEEEECCCHHHHHHHHHCCCCCEEEECCCCC GSFSGYAMEETEVSKIQIGNPQGDKKAGAYQTTLTFTAAFK CCCCCCEECCCCEEEEEECCCCCCCCCCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA