| Definition | Listeria monocytogenes Clip81459, complete genome. |
|---|---|
| Accession | NC_012488 |
| Length | 2,912,690 |
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The map label for this gene is 226223090
Identifier: 226223090
GI number: 226223090
Start: 502789
End: 504549
Strand: Direct
Name: 226223090
Synonym: Lm4b_00487
Alternate gene names: NA
Gene position: 502789-504549 (Clockwise)
Preceding gene: 226223089
Following gene: 226223091
Centisome position: 17.26
GC content: 38.16
Gene sequence:
>1761_bases ATGAAAAAGTTTTCCATGCGAGTGGTCCTTATTATTTCTGTGCTTTTTATTGCTTTTGGGAGCGCTAATGTTTCTATCGC ACAAGAAAGGGACACAACGAATAAGCTTCCAGAAGAGGAGCTAGGTTCTCTGGATACCTCTAATATCATTGCAGAAGAAG TTGCGCAAGAGAAACCAGCAGAGGTGGAGCAACTAGAAGAAATCCCAACTACGGATGAATTGATGCAAAATCCAGATGTT CTTGAGAAGTCTGTTGCCGATTCGGATGATCCGGATTTAACAGTGGTAAGCTCAGGTGATTTTTGGACGATTTATCGTAA TACTGTGAACAATGAATATAACTTGCGTATGTTTGGTAACGTGCCAAGCAGTAGACCAACCGCTTGGAATAGTTATTTGA AAAGCATTAAACATATAGAGATTGAAGAAGCTACGCTGACAGGAAGTTTTGCATCGTATTTTAGAGGTACTGATTTCCCA GTACTTGAAAGTGTGAGAATTGAACAGTGTAATTTGTCTGGAGTGACGTCTTTTGAAATGGCATTTTATAATTCAGGAAT TGAAAAAGTTATTATTAGGGATAATGATTATCCGAAAGCACCATCTTTACTCACTGCTACGCAATATATGTTTTCCTTAT GTCGTAATCTTAGTGAGCTTGATTTGAGTGGCCTTGATACGAGTGCTGTAACTAATATGTATGCCATGTTTCAAAATTGT ACTAGCCTTGAAGAGTTAGATCTAAGCAACTTTGATACCAGTTCAGCTACTAATATGTATTCCATGTTTTCGGGTTGTAG ATCACTTGAGAAATTGGATGTAAGCAACTTTGATACGAGTTCAGTTGCACATATGCAGTTCATGTTTGAAAAATGTAGTA TCCTTGAAGAATTAGATCTAAGTAATTTTGATACAAGTTCAGTGACTAATATGTCTTACATGTTTCAACTTTGTCCAGCG TTAAAATCTTTATATCTGGATAATTTTACGGATGCAGCAATTATGACAGGTATGTTTGCTGGAACCACCTCCCTAACCTA CTTGTTTGTCAGTCACAATTTAAGTACTTTTAATAACTTAGAAAATACAAGCTGGTATGATGAAAAGAATTGGGTGCAGT TTTCGAATCTCTCGCAACTACAGACATATCACAGGCAACAAAGTGAACCTATTGGCTATAGAAAAGGCGCTTTCCTTTCT CTAACAATGGATGCGATGGGTGGAGAATTTGAAGATGCGGAAGAACAAAAAGTACAAAATAAAATTTCTGGGGAGTACTG GGAAGAAGTGATTCCAGTAAAAGAAGGACATTACTTTGACGGGTGGTATCTTGATCAAAATTTCACTAATAAGTTTGATT TTTCCTTGCCTGCTGCTGTATCTACAACTATTTACGCCAAATGGGTAGAAAACTACACGGTGATTATTCCAGCGTCTATT TCCTTAAATGAAGCTTCCGAATTGAAAGTACAAGGGATTAATCGAGGGAGTAAAACTTTATCCGTAGGTTTGAATTATGA GGAAACAACCATTTCTGAGAGCAACAAGCTAACCTTGTCCAATACGGCAGACACAACAGTCCGATGCTTGGCACCAATGA GTTGGGACGGGTCCGAAACTAATCCGGAAAAAGCGATTTTAACCCTTGCCCCAGGTTCGGAAATAACAGAAGGCGATGCA GTTATGGAAATAAAATCCCCAGAAAACATCCAGGCTGGAAAATATACGGGGAACGTCGTATTTTCGATTAAGTATGAATG A
Upstream 100 bases:
>100_bases AAAATTTTATGGCCGGAAAAGCTTTTCGACTCCTCTATAATTAAGTTGCAGCTAGAAAGTTTGCATCTAGAAATTAACTA CGAAAGAAGGAGGGGAGCTG
Downstream 100 bases:
>100_bases TGTAAATTAGCCAGACTAGTGATCATGTCAAGGTCATTTGGTTATGAATAAATTGGAGGTTACCTATGAAGAAGAAAAGA GTAGTGATCATATCCTTACT
Product: membrane associated lipoprotein
Products: NA
Alternate protein names: Membrane Associated Lipoprotein; Cell Surface Protein; Adhesin-Like Protein; Surface Protein; Surface -Residue Repeat-Containing Protein; Transmembrane Protein; LPXTG-Motif Cell Wall Anchor Domain Protein; Cell Wall Anchor Domain-Containing Protein
Number of amino acids: Translated: 586; Mature: 586
Protein sequence:
>586_residues MKKFSMRVVLIISVLFIAFGSANVSIAQERDTTNKLPEEELGSLDTSNIIAEEVAQEKPAEVEQLEEIPTTDELMQNPDV LEKSVADSDDPDLTVVSSGDFWTIYRNTVNNEYNLRMFGNVPSSRPTAWNSYLKSIKHIEIEEATLTGSFASYFRGTDFP VLESVRIEQCNLSGVTSFEMAFYNSGIEKVIIRDNDYPKAPSLLTATQYMFSLCRNLSELDLSGLDTSAVTNMYAMFQNC TSLEELDLSNFDTSSATNMYSMFSGCRSLEKLDVSNFDTSSVAHMQFMFEKCSILEELDLSNFDTSSVTNMSYMFQLCPA LKSLYLDNFTDAAIMTGMFAGTTSLTYLFVSHNLSTFNNLENTSWYDEKNWVQFSNLSQLQTYHRQQSEPIGYRKGAFLS LTMDAMGGEFEDAEEQKVQNKISGEYWEEVIPVKEGHYFDGWYLDQNFTNKFDFSLPAAVSTTIYAKWVENYTVIIPASI SLNEASELKVQGINRGSKTLSVGLNYEETTISESNKLTLSNTADTTVRCLAPMSWDGSETNPEKAILTLAPGSEITEGDA VMEIKSPENIQAGKYTGNVVFSIKYE
Sequences:
>Translated_586_residues MKKFSMRVVLIISVLFIAFGSANVSIAQERDTTNKLPEEELGSLDTSNIIAEEVAQEKPAEVEQLEEIPTTDELMQNPDV LEKSVADSDDPDLTVVSSGDFWTIYRNTVNNEYNLRMFGNVPSSRPTAWNSYLKSIKHIEIEEATLTGSFASYFRGTDFP VLESVRIEQCNLSGVTSFEMAFYNSGIEKVIIRDNDYPKAPSLLTATQYMFSLCRNLSELDLSGLDTSAVTNMYAMFQNC TSLEELDLSNFDTSSATNMYSMFSGCRSLEKLDVSNFDTSSVAHMQFMFEKCSILEELDLSNFDTSSVTNMSYMFQLCPA LKSLYLDNFTDAAIMTGMFAGTTSLTYLFVSHNLSTFNNLENTSWYDEKNWVQFSNLSQLQTYHRQQSEPIGYRKGAFLS LTMDAMGGEFEDAEEQKVQNKISGEYWEEVIPVKEGHYFDGWYLDQNFTNKFDFSLPAAVSTTIYAKWVENYTVIIPASI SLNEASELKVQGINRGSKTLSVGLNYEETTISESNKLTLSNTADTTVRCLAPMSWDGSETNPEKAILTLAPGSEITEGDA VMEIKSPENIQAGKYTGNVVFSIKYE >Mature_586_residues MKKFSMRVVLIISVLFIAFGSANVSIAQERDTTNKLPEEELGSLDTSNIIAEEVAQEKPAEVEQLEEIPTTDELMQNPDV LEKSVADSDDPDLTVVSSGDFWTIYRNTVNNEYNLRMFGNVPSSRPTAWNSYLKSIKHIEIEEATLTGSFASYFRGTDFP VLESVRIEQCNLSGVTSFEMAFYNSGIEKVIIRDNDYPKAPSLLTATQYMFSLCRNLSELDLSGLDTSAVTNMYAMFQNC TSLEELDLSNFDTSSATNMYSMFSGCRSLEKLDVSNFDTSSVAHMQFMFEKCSILEELDLSNFDTSSVTNMSYMFQLCPA LKSLYLDNFTDAAIMTGMFAGTTSLTYLFVSHNLSTFNNLENTSWYDEKNWVQFSNLSQLQTYHRQQSEPIGYRKGAFLS LTMDAMGGEFEDAEEQKVQNKISGEYWEEVIPVKEGHYFDGWYLDQNFTNKFDFSLPAAVSTTIYAKWVENYTVIIPASI SLNEASELKVQGINRGSKTLSVGLNYEETTISESNKLTLSNTADTTVRCLAPMSWDGSETNPEKAILTLAPGSEITEGDA VMEIKSPENIQAGKYTGNVVFSIKYE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65703; Mature: 65703
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFSMRVVLIISVLFIAFGSANVSIAQERDTTNKLPEEELGSLDTSNIIAEEVAQEKPA CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCC EVEQLEEIPTTDELMQNPDVLEKSVADSDDPDLTVVSSGDFWTIYRNTVNNEYNLRMFGN HHHHHHHCCCHHHHHCCCHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCEEEEEECC VPSSRPTAWNSYLKSIKHIEIEEATLTGSFASYFRGTDFPVLESVRIEQCNLSGVTSFEM CCCCCCCHHHHHHHHHHCEEEEEEEECCHHHHHHCCCCCCHHHCCCCEECCCCCCCHHHH AFYNSGIEKVIIRDNDYPKAPSLLTATQYMFSLCRNLSELDLSGLDTSAVTNMYAMFQNC HHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHCC TSLEELDLSNFDTSSATNMYSMFSGCRSLEKLDVSNFDTSSVAHMQFMFEKCSILEELDL CCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC SNFDTSSVTNMSYMFQLCPALKSLYLDNFTDAAIMTGMFAGTTSLTYLFVSHNLSTFNNL CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEECCCHHHCCC ENTSWYDEKNWVQFSNLSQLQTYHRQQSEPIGYRKGAFLSLTMDAMGGEFEDAEEQKVQN CCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCEEEEEHHHCCCCCCCHHHHHHHH KISGEYWEEVIPVKEGHYFDGWYLDQNFTNKFDFSLPAAVSTTIYAKWVENYTVIIPASI HHCHHHHHHHCCCCCCCEECCEEECCCCCCCCCCCCCHHHHHHHHEEECCCEEEEEECCE SLNEASELKVQGINRGSKTLSVGLNYEETTISESNKLTLSNTADTTVRCLAPMSWDGSET ECCCCCCEEEEECCCCCCEEEEECCCCHHCCCCCCCEEEECCCCCEEEEEECCCCCCCCC NPEKAILTLAPGSEITEGDAVMEIKSPENIQAGKYTGNVVFSIKYE CCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCEECEEEEEEEEC >Mature Secondary Structure MKKFSMRVVLIISVLFIAFGSANVSIAQERDTTNKLPEEELGSLDTSNIIAEEVAQEKPA CCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCC EVEQLEEIPTTDELMQNPDVLEKSVADSDDPDLTVVSSGDFWTIYRNTVNNEYNLRMFGN HHHHHHHCCCHHHHHCCCHHHHHHHCCCCCCCEEEEECCCEEEEEECCCCCCEEEEEECC VPSSRPTAWNSYLKSIKHIEIEEATLTGSFASYFRGTDFPVLESVRIEQCNLSGVTSFEM CCCCCCCHHHHHHHHHHCEEEEEEEECCHHHHHHCCCCCCHHHCCCCEECCCCCCCHHHH AFYNSGIEKVIIRDNDYPKAPSLLTATQYMFSLCRNLSELDLSGLDTSAVTNMYAMFQNC HHHCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHHHHCC TSLEELDLSNFDTSSATNMYSMFSGCRSLEKLDVSNFDTSSVAHMQFMFEKCSILEELDL CCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCC SNFDTSSVTNMSYMFQLCPALKSLYLDNFTDAAIMTGMFAGTTSLTYLFVSHNLSTFNNL CCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCEEEEEEEECCCHHHCCC ENTSWYDEKNWVQFSNLSQLQTYHRQQSEPIGYRKGAFLSLTMDAMGGEFEDAEEQKVQN CCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCEEEEEHHHCCCCCCCHHHHHHHH KISGEYWEEVIPVKEGHYFDGWYLDQNFTNKFDFSLPAAVSTTIYAKWVENYTVIIPASI HHCHHHHHHHCCCCCCCEECCEEECCCCCCCCCCCCCHHHHHHHHEEECCCEEEEEECCE SLNEASELKVQGINRGSKTLSVGLNYEETTISESNKLTLSNTADTTVRCLAPMSWDGSET ECCCCCCEEEEECCCCCCEEEEECCCCHHCCCCCCCEEEECCCCCEEEEEECCCCCCCCC NPEKAILTLAPGSEITEGDAVMEIKSPENIQAGKYTGNVVFSIKYE CCCCEEEEECCCCCCCCCCEEEEECCCCCCCCCCEECEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA